CuGenDBv2

Gene ID	Sed0018780
Organism	Sechium edule (Chayote v1)
Description	succinate dehydrogenase subunit 6, mitochondrial-like
Genome location	LG08:22508902..22525230
RNA-Seq Expression	Sed0018780
Synteny	Sed0018780
Gene Ontology terms	GO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0043495 - protein membrane anchor (molecular function)
InterPro domains	IPR034574 - Succinate dehydrogenase subunit 6, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008450314.1 PREDICTED: succinate dehydrogenase subunit 6, mitochondrial [Cucumis melo]

4.9e-70

86.39

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNY+P+VQR T LP WSSSDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYS+SLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS
        SFLAGG FG+TFG EIANHWYQLYRLDTM AQVKFMEWWRNKSEG S
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS

XP_011660175.1 succinate dehydrogenase subunit 6, mitochondrial [Cucumis sativus]

1.2e-71

88.44

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWSDRFSILDNY+P+VQRQT LP WSSSDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS
        SFLAGGVFG+TFG EIANHWYQLYR+DTM AQVKFMEWWRNKSEG S
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS

XP_022153276.1 succinate dehydrogenase subunit 6, mitochondrial [Momordica charantia]

2.2e-70

87.59

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNYAP+VQR+  LP WSSSDV+ FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
        SFLAGGVFG+TFGHE+ANHWYQLYRLDTM AQVKFMEWWRNK+EG
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG

XP_022927277.1 succinate dehydrogenase subunit 6, mitochondrial-like [Cucurbita moschata]

9.8e-71

87.59

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNY+PFVQR+  LP WS SDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
        SFLAGG FG+TFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKSEG
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG

XP_038880701.1 succinate dehydrogenase subunit 6, mitochondrial [Benincasa hispida]

2.8e-73

88.97

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSI+DNY+P++QRQTRLPPWSSSDV++FIASDPVHGPALKTAREAVNFGLTGS +GA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
        SFLAG  FG+TFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BP04 succinate dehydrogenase subunit 6, mitochondrial

2.4e-70

86.39

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNY+P+VQR T LP WSSSDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYS+SLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS
        SFLAGG FG+TFG EIANHWYQLYRLDTM AQVKFMEWWRNKSEG S
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS

A0A5D3DY28 Succinate dehydrogenase subunit 6

2.4e-70

86.39

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNY+P+VQR T LP WSSSDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYS+SLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS
        SFLAGG FG+TFG EIANHWYQLYRLDTM AQVKFMEWWRNKSEG S
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS

A0A6J1DK58 succinate dehydrogenase subunit 6, mitochondrial

1.1e-70

87.59

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNYAP+VQR+  LP WSSSDV+ FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
        SFLAGGVFG+TFGHE+ANHWYQLYRLDTM AQVKFMEWWRNK+EG
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG

A0A6J1EGQ0 succinate dehydrogenase subunit 6, mitochondrial-like

4.7e-71

87.59

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNY+PFVQR+  LP WS SDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
        SFLAGG FG+TFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKSEG
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG

A0A6J1HQ77 succinate dehydrogenase subunit 6, mitochondrial-like

2.4e-70

87.5

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        M DS SQSFFRKHWEGYKEFWS+RFSILDNY+PFVQR+  LP WS SDV++FIASDPVHGP LKTAREAVNFGLTGS IGA+STA VAWKYSRSLHGAGL
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
        SFLAGG FG+TFGHEIANHWYQLYR+DTMGAQVKFMEWWRNKSE
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE

SwissProt top hits

e value

%identity

Alignment

Q6ZCC4 Succinate dehydrogenase subunit 6, mitochondrial

2.5e-29

44.03

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Query:  KHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGLSFLAGGVFGYT
        +H EG K  W+  FS LD +     R   LP W+ +DVD+FIASDPV+GP LK  RE+  F L G+ +G      +A KYS++ HG  L+   G + G  
Subjt:  KHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGLSFLAGGVFGYT

Query:  FGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG
         G E+A HWYQLY+ D  GA ++F+ WW +K  G
Subjt:  FGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEG

Q941A6 Succinate dehydrogenase subunit 6, mitochondrial

1.0e-54

68.75

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Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        MGD  S+SF  K+W G K+FWSDR S  +NY  F +R   LP WSSSDV++FIASDPVHGP LKTAREAV FG+TG+ +GA+STA+ AWKYSRS HGA L
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
        SFL GGVFG+TFG E+ANH  QLY+LDTM AQVKFMEWW  KS+
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G08480.1 unknown protein

7.3e-56

68.75

Show/hide

Query:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL
        MGD  S+SF  K+W G K+FWSDR S  +NY  F +R   LP WSSSDV++FIASDPVHGP LKTAREAV FG+TG+ +GA+STA+ AWKYSRS HGA L
Subjt:  MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGL

Query:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE
        SFL GGVFG+TFG E+ANH  QLY+LDTM AQVKFMEWW  KS+
Subjt:  SFLAGGVFGYTFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSE

Sequences

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CDS sequence

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ATGGGGGATTCTCCGTCTCAATCCTTCTTCAGAAAGCACTGGGAGGGCTACAAGGAATTTTGGTCCGACAGATTCTCCATCCTCGACAACTATGCCCCTTTCGTCCAGCG
CCAGACCCGACTTCCCCCTTGGTCTTCCTCCGATGTCGACGACTTTATCGCCTCCGACCCCGTTCACGGCCCCGCTTTGAAGACTGCTAGAGAAGCTGTAAACTTTGGTC
TTACGGGAAGTTGTATTGGAGCTATATCAACTGCAAGTGTTGCGTGGAAATACTCAAGAAGTTTGCATGGTGCTGGGCTGTCCTTTCTAGCGGGAGGTGTATTCGGTTAT
ACTTTTGGGCATGAGATAGCAAACCATTGGTATCAACTCTACAGGTTGGATACCATGGGTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGATGTTC
TTAA

mRNA sequence

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GGCAATTTGGGGCAGAATGAAAAGGGAGGCATTGATATTGGGCCTTGTGTGTTGGGCCAAGAGCAGAGAAGGGTGAGGGAGAGAAAAAGGAAGCGGCAGATTTTGGTGAG
AAAACAAAAGTAGGTTTGAAGAAGAAGCGGAGATTGCAGAGGTTGAGGATTGTGGTTTGTGAATTCTGAATCTGAAGGTGTTTAAGGCAATCATGGGGGATTCTCCGTCT
CAATCCTTCTTCAGAAAGCACTGGGAGGGCTACAAGGAATTTTGGTCCGACAGATTCTCCATCCTCGACAACTATGCCCCTTTCGTCCAGCGCCAGACCCGACTTCCCCC
TTGGTCTTCCTCCGATGTCGACGACTTTATCGCCTCCGACCCCGTTCACGGCCCCGCTTTGAAGACTGCTAGAGAAGCTGTAAACTTTGGTCTTACGGGAAGTTGTATTG
GAGCTATATCAACTGCAAGTGTTGCGTGGAAATACTCAAGAAGTTTGCATGGTGCTGGGCTGTCCTTTCTAGCGGGAGGTGTATTCGGTTATACTTTTGGGCATGAGATA
GCAAACCATTGGTATCAACTCTACAGGTTGGATACCATGGGTGCACAAGTTAAGTTTATGGAGTGGTGGAGAAACAAGAGTGAGGGATGTTCTTAAACTCTGATTTGCAG
TTGAAGCAGCACTCCGCCGCCATCTGAAATAAAAGTTAAGTACGACTTTGTTGAAATACAATGGTTGATTGCTTTGTTTTGTGATGAACTCTTCCAATCTAAGTTCAGAA
AAGTACTATCCTTTTCTTTTTTCTTTTTCTTTTTCTTTTGAATTTAATCTTCTGGAAATGAATGAATTCATTTGCAAGCTTGTTTAATATGTTTGTTCATCTTTATCAAA
TACCTCTAAACCCCCGAGTGTTAAGGACCAATCTAAAGCATCAGTTCTTTGCCC

Protein sequence

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MGDSPSQSFFRKHWEGYKEFWSDRFSILDNYAPFVQRQTRLPPWSSSDVDDFIASDPVHGPALKTAREAVNFGLTGSCIGAISTASVAWKYSRSLHGAGLSFLAGGVFGY
TFGHEIANHWYQLYRLDTMGAQVKFMEWWRNKSEGCS

Sed0018780 (gene) of Chayote v1 genome