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Sed0018787 (gene) of Chayote v1 genome

Gene IDSed0018787
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive family protein
Genome locationLG02:52522049..52522762
RNA-Seq ExpressionSed0018787
SyntenySed0018787
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048857.1 auxin-responsive family protein [Cucumis melo var. makuwa]3.3e-4484.55Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF-----HHRRHHH
        MGGGERRRQ+ AA  VPKGCLAVKVGQKGEEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SF     HH  HH 
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF-----HHRRHHH

Query:  HHLGCFRVSF
        HHLGCFRVSF
Subjt:  HHLGCFRVSF

XP_004133791.1 auxin-responsive protein SAUR32 [Cucumis sativus]2.5e-4482.3Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHR--------R
        MGGGERRRQ++A   VPKGCLAVKVGQKGEEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SFH R        +
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHR--------R

Query:  HHHHHLGCFRVSF
        HHHHHLGCFRVSF
Subjt:  HHHHHLGCFRVSF

XP_022924405.1 auxin-responsive protein SAUR32-like [Cucurbita moschata]1.1e-4487.62Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC
        MGGGERRRQ  + AGVPKGCLAV+VGQK EEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SF HRRHHHHH+GC
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

XP_023526937.1 auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]1.5e-4484.26Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF---HHRRHHHHH
        M GGERRRQ +AAA VPKGCLAV+VGQK EEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SF   HH  HHHHH
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF---HHRRHHHHH

Query:  LGCFRVSF
        +GCFRVSF
Subjt:  LGCFRVSF

XP_038900878.1 auxin-responsive protein SAUR32-like [Benincasa hispida]3.9e-4587.74Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHR-RHHHHHLG
        MGGGERRRQ++AA  VPKGCLAV+VGQKGEEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SFH R  HHHHHLG
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHR-RHHHHHLG

Query:  CFRVSF
        CFRVSF
Subjt:  CFRVSF

TrEMBL top hitse value%identityAlignment
A0A0A0L5S7 Uncharacterized protein1.2e-4482.3Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHR--------R
        MGGGERRRQ++A   VPKGCLAVKVGQKGEEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SFH R        +
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHR--------R

Query:  HHHHHLGCFRVSF
        HHHHHLGCFRVSF
Subjt:  HHHHHLGCFRVSF

A0A5D3DBZ9 Auxin-responsive family protein1.6e-4484.55Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF-----HHRRHHH
        MGGGERRRQ+ AA  VPKGCLAVKVGQKGEEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SF     HH  HH 
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF-----HHRRHHH

Query:  HHLGCFRVSF
        HHLGCFRVSF
Subjt:  HHLGCFRVSF

A0A6J1D068 auxin-responsive protein SAUR32-like3.9e-4384.62Show/hide
Query:  GGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGCF
        GGG  +RQ +A A VPKGCLAVKVG +GEEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQ MIDR++SF  RRHHHHH+GCF
Subjt:  GGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGCF

Query:  RVSF
        RVSF
Subjt:  RVSF

A0A6J1EEX5 auxin-responsive protein SAUR32-like5.4e-4587.62Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC
        MGGGERRRQ  + AGVPKGCLAV+VGQK EEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SF HRRHHHHH+GC
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

A0A6J1IWQ0 auxin-responsive protein SAUR32-like3.0e-4383.81Show/hide
Query:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC
        M GG+RRR  + AA VPKGCLAV+VGQK EEQ RFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTI IPCHVE+FRHVQGMIDR++SFH R HHHHH+GC
Subjt:  MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC

Query:  FRVSF
        FRVSF
Subjt:  FRVSF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR362.5e-1554.17Show/hide
Query:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSS
        VP+G LA+ VGQK  + HR +VP++YFNHP F +LL+EAE+EYGF  +G ITIPC    F  V+  I   SS
Subjt:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSS

P33081 Auxin-induced protein 15A4.9e-1146.75Show/hide
Query:  RQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTITIPCHVEQFRHVQGMID
        R+A+ AA  PKG LAV VG+K     RFV+PV Y N P F  LL +AEEE+G+D   G +TIPC  + F+ +   ++
Subjt:  RQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTITIPCHVEQFRHVQGMID

P33082 Auxin-induced protein X156.5e-1150Show/hide
Query:  RQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTITIPCHVEQFRHV
        R+A+ A   PKG LAV VG+K     RFV+PV Y N P F  LL +AEEE+G+D   G +TIPC  E F+ +
Subjt:  RQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTITIPCHVEQFRHV

Q41220 Auxin-responsive protein SAUR154.9e-1145.07Show/hide
Query:  AAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTITIPCHVEQFRHVQGMI
        ++  P+G +AV VG+  +++ R+VVPV Y N P F QLL ++EEE+G+D   G +TIPCH   F  V   I
Subjt:  AAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTITIPCHVEQFRHVQGMI

Q9ZUZ3 Auxin-responsive protein SAUR322.7e-3360.83Show/hide
Query:  MGGGER--------RRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF----
        MG GE+        R+Q+     VPKGCLA+KVG +GEEQ RF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTITIPCHVE+FR+VQ +ID + S     
Subjt:  MGGGER--------RRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF----

Query:  -HHRRH-----HHHHLGCFR
         HH RH     +HH +GCFR
Subjt:  -HHRRH-----HHHHLGCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family1.9e-3460.83Show/hide
Query:  MGGGER--------RRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF----
        MG GE+        R+Q+     VPKGCLA+KVG +GEEQ RF+VPV+YFNHP FMQLLKEAE+EYGFDQKGTITIPCHVE+FR+VQ +ID + S     
Subjt:  MGGGER--------RRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF----

Query:  -HHRRH-----HHHHLGCFR
         HH RH     +HH +GCFR
Subjt:  -HHRRH-----HHHHLGCFR

AT3G60690.1 SAUR-like auxin-responsive protein family4.7e-1753.42Show/hide
Query:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF
        VPKG  AV +G+K  +  R +VP++YFNHP F +LL+EAEEE+GF Q+G ITIPC    F+ VQ  I+  S F
Subjt:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSF

AT3G61900.1 SAUR-like auxin-responsive protein family2.7e-2869.41Show/hide
Query:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC
        VPKGCLA+KVG K EE+ RFVVPV YFNHP FMQLL+EAEEEYGF+QKGTITIPCHVE FR+VQ MI+R+ S           GC
Subjt:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGC

AT4G00880.1 SAUR-like auxin-responsive protein family4.7e-3370.83Show/hide
Query:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSS--------FHHRRHHHHHLGCFRV
        VPKGCLAVKVGQ GEEQ RFV+PVMYFNHP F QLLKEAEEE+GF QKGTITIPCHVE+FR+VQG+IDR+++         HH  HH+H + CFRV
Subjt:  VPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSS--------FHHRRHHHHHLGCFRV

AT5G53590.1 SAUR-like auxin-responsive protein family6.4e-2249.48Show/hide
Query:  VPKGCLAVKVGQKGEEQ--HRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHH---------RRHHHHHLGCF
        VPKGC+A+ VG + +E+  HRFVVP+++ +HP F+ LLKEAE+EYGF   G ITIPC V++F+HVQ +ID ++   H           HH++HL CF
Subjt:  VPKGCLAVKVGQKGEEQ--HRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHH---------RRHHHHHLGCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCGGAGAGAGACGACGGCAAGCGGCGGCGGCGGCGGGGGTGCCGAAAGGGTGTTTGGCGGTGAAGGTGGGGCAGAAAGGGGAGGAGCAGCACAGATTCGTGGT
GCCGGTGATGTACTTCAATCACCCGCGGTTCATGCAACTCCTCAAAGAGGCCGAGGAGGAGTACGGTTTTGATCAGAAGGGGACCATCACCATTCCCTGCCACGTGGAGC
AGTTTCGGCACGTGCAGGGCATGATTGACCGTGACAGTTCCTTCCACCACCGCCGTCACCACCACCACCACCTTGGTTGCTTCCGGGTTTCCTTCTAA
mRNA sequenceShow/hide mRNA sequence
CCAAACCCTAATTCCCAAGTTGAAAATAATCAAATTAAACACAAACACACACAGCCATGGGCATTGTGAACGACTCTCCAAATCCGTCGTCGTTTTACACTCCCTCAGAT
CCTTGGCCGTTTCCTCTCTGAAAATTGGATTGTGTGGAATTAATTAATAATGGGTGGCGGAGAGAGACGACGGCAAGCGGCGGCGGCGGCGGGGGTGCCGAAAGGGTGTT
TGGCGGTGAAGGTGGGGCAGAAAGGGGAGGAGCAGCACAGATTCGTGGTGCCGGTGATGTACTTCAATCACCCGCGGTTCATGCAACTCCTCAAAGAGGCCGAGGAGGAG
TACGGTTTTGATCAGAAGGGGACCATCACCATTCCCTGCCACGTGGAGCAGTTTCGGCACGTGCAGGGCATGATTGACCGTGACAGTTCCTTCCACCACCGCCGTCACCA
CCACCACCACCTTGGTTGCTTCCGGGTTTCCTTCTAAATTCTAAATTCCCCCATCTAATACCAAAATTACACACCTTTTTTTCATGTAAATTTTCTCTTTTTTGTTTCTT
AGGATAGGTCCTTTTGCAAATTTAGGGTGTAATCCTAACAAAACTTCAATAAATATTTACTTTGCCTTTCTTTCTTCTACAACCCATTGACAAATATTGGAACGTTTCTT
ATTTGGTCGGTCATATACTCTTTGTATTTTTAAATTATTTCTTCTTTTCTTCAC
Protein sequenceShow/hide protein sequence
MGGGERRRQAAAAAGVPKGCLAVKVGQKGEEQHRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTITIPCHVEQFRHVQGMIDRDSSFHHRRHHHHHLGCFRVSF