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Sed0018796 (gene) of Chayote v1 genome

Gene IDSed0018796
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF538
Genome locationLG04:42122891..42124883
RNA-Seq ExpressionSed0018796
SyntenySed0018796
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151974.1 uncharacterized protein LOC101218420 [Cucumis sativus]9.1e-6579.27Show/hide
Query:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE
        LFG   +++ I + L+MG C    +D SSIH +LRSMG PAGLVPKQ KSYTLAENGRLEVYLD PC+AKYENRVIF++VFSANLSYGSL GVEGMSQEE
Subjt:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE

Query:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        LFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQV LRNPL++ QRGFESLR
Subjt:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

XP_008454610.1 PREDICTED: uncharacterized protein LOC103494976 [Cucumis melo]1.2e-6478.66Show/hide
Query:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE
        LFG   +++ I + L+MG C    ++ SSIH +LRSMGLPAGLVPKQ KSYTLA+NGRLEVYLD PC+AKYENRVIF++VFSANLSYGSL GVEGMSQEE
Subjt:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE

Query:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        LFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQV LRNPL++ QRGFESLR
Subjt:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

XP_022940173.1 uncharacterized protein LOC111445879 [Cucurbita moschata]5.3e-7383.43Show/hide
Query:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG
        MALF ++NL +WI M L +GFC C C   KDDSSIHE+LRSMGLPAGLVPKQVKSYT+AENGRLEV+LDGPC+AKYENRVIFESVFSANLSYGSL GV+G
Subjt:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG

Query:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCS PQ   RN L +NQR FESLR
Subjt:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

XP_022981634.1 uncharacterized protein LOC111480695 [Cucurbita maxima]1.5e-7283.43Show/hide
Query:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG
        MALF ++NL +WI M L +GFC C C   KDDSSIHE+LRSMGLPAGLVPKQVKSYT+AENGRLEV+LDGPC+AKYENRVIFESVFSANLSYGSL GVEG
Subjt:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG

Query:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCS PQ    N L +NQR FESLR
Subjt:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

XP_038900271.1 uncharacterized protein LOC120087352 [Benincasa hispida]7.9e-6981.07Show/hide
Query:  ALFGNKNLKVWIFM--FLMMGFC-GCNC-KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG
        ALFG+ NL++WI +   L++G C  CNC +D SSIH +LRSMGLPAGLVPKQ KSYTL ENGRLEVYLD PC+AKYENRVIF++VFSANLSYGSL GVEG
Subjt:  ALFGNKNLKVWIFM--FLMMGFC-GCNC-KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG

Query:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        MSQEELFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQV LRNPL+K QRGFESLR
Subjt:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

TrEMBL top hitse value%identityAlignment
A0A0A0L7K3 Uncharacterized protein4.4e-6579.27Show/hide
Query:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE
        LFG   +++ I + L+MG C    +D SSIH +LRSMG PAGLVPKQ KSYTLAENGRLEVYLD PC+AKYENRVIF++VFSANLSYGSL GVEGMSQEE
Subjt:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE

Query:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        LFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQV LRNPL++ QRGFESLR
Subjt:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

A0A1S3BZT2 uncharacterized protein LOC1034949765.7e-6578.66Show/hide
Query:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE
        LFG   +++ I + L+MG C    ++ SSIH +LRSMGLPAGLVPKQ KSYTLA+NGRLEVYLD PC+AKYENRVIF++VFSANLSYGSL GVEGMSQEE
Subjt:  LFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEE

Query:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        LFLWLPVKDIIVNYPTSGV+LIDIGVAHKQLSLSLFEDPPDC+ PQV LRNPL++ QRGFESLR
Subjt:  LFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

A0A6J1FNJ8 uncharacterized protein LOC1114458792.6e-7383.43Show/hide
Query:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG
        MALF ++NL +WI M L +GFC C C   KDDSSIHE+LRSMGLPAGLVPKQVKSYT+AENGRLEV+LDGPC+AKYENRVIFESVFSANLSYGSL GV+G
Subjt:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG

Query:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCS PQ   RN L +NQR FESLR
Subjt:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

A0A6J1IHB3 uncharacterized protein LOC1114769448.3e-6477.65Show/hide
Query:  LFGNKNLKVWI-FMFLMMGFCGCNC-----KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVE
        LFG+ N ++ I  + L +GFC   C     KD SSIH +LRSMGLPAGLVPKQVKSYTL EN RLEVYLDGPC+AKYENRVIFESVFSANLSYGSL GVE
Subjt:  LFGNKNLKVWI-FMFLMMGFCGCNC-----KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVE

Query:  GMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        GMSQEELFLWLPVKDIIVN P+SGV+LIDIGVAHKQLSLSLFEDPPDC+ PQ  LRNPL+K +R FESLR
Subjt:  GMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

A0A6J1J2E3 uncharacterized protein LOC1114806957.5e-7383.43Show/hide
Query:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG
        MALF ++NL +WI M L +GFC C C   KDDSSIHE+LRSMGLPAGLVPKQVKSYT+AENGRLEV+LDGPC+AKYENRVIFESVFSANLSYGSL GVEG
Subjt:  MALFGNKNLKVWIFMFLMMGFCGCNC---KDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEG

Query:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR
        MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCS PQ    N L +NQR FESLR
Subjt:  MSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61667.1 Protein of unknown function, DUF5384.5e-3863.03Show/hide
Query:  SSIHEVLRSMGLPAGLVPKQVKSYTLAE-NGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGV
        SSI  +L + GLP GL P  V+SY+L +  G LEV L  PC A++ENRV F+ V  ANLSYG L G+EG++QEELFLWLPVK I VN P+SG+VL DIGV
Subjt:  SSIHEVLRSMGLPAGLVPKQVKSYTLAE-NGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGV

Query:  AHKQLSLSLFEDPPDCSTP
        AHKQ+S SLFEDPP C  P
Subjt:  AHKQLSLSLFEDPPDCSTP

AT3G07460.1 Protein of unknown function, DUF5387.2e-2847.46Show/hide
Query:  DDSSIHEVLRSMGLPAGLVPKQVKSYTL-AENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDI
        ++ SI E+L + GLP GL PK VK +T+  E GR  VYL+  C AKYE  + ++ + S  + Y  +  + G+S +ELFLWL VK I V+ P+SG++  D+
Subjt:  DDSSIHEVLRSMGLPAGLVPKQVKSYTL-AENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDI

Query:  GVAHKQLSLSLFEDPPDC
        GV  KQ SLSLFE P DC
Subjt:  GVAHKQLSLSLFEDPPDC

AT3G07460.2 Protein of unknown function, DUF5387.2e-2847.46Show/hide
Query:  DDSSIHEVLRSMGLPAGLVPKQVKSYTL-AENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDI
        ++ SI E+L + GLP GL PK VK +T+  E GR  VYL+  C AKYE  + ++ + S  + Y  +  + G+S +ELFLWL VK I V+ P+SG++  D+
Subjt:  DDSSIHEVLRSMGLPAGLVPKQVKSYTL-AENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDI

Query:  GVAHKQLSLSLFEDPPDC
        GV  KQ SLSLFE P DC
Subjt:  GVAHKQLSLSLFEDPPDC

AT3G07470.1 Protein of unknown function, DUF5385.2e-2643.22Show/hide
Query:  DDSSIHEVLRSMGLPAGLVPKQVKSYTL-AENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDI
        +  +I+E+L + GLP+G+ PK V+ +T   E GR  VYL+  C AKYE  + +++  +  +    ++ + G+S +ELFLW PVK I V+ P+SG++  D+
Subjt:  DDSSIHEVLRSMGLPAGLVPKQVKSYTL-AENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDI

Query:  GVAHKQLSLSLFEDPPDC
        GV  KQ SLSLFE P DC
Subjt:  GVAHKQLSLSLFEDPPDC

AT5G54530.1 Protein of unknown function, DUF5383.0e-4261.94Show/hide
Query:  SIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAH
        ++H+VLRS GLPAGL+P++V SY L  +GRLEV+L  PC AK+E  V FE+V   NLSYGSL GVEG+SQ+ELFLWL VKDI+V  P SGV++ DIGVA 
Subjt:  SIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVKDIIVNYPTSGVVLIDIGVAH

Query:  KQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFES
        KQLSLSLFEDPP C  P   L+  ++++ RGFE+
Subjt:  KQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGTTTGGCAACAAGAACTTGAAAGTTTGGATCTTTATGTTCTTGATGATGGGTTTTTGTGGGTGTAATTGTAAGGATGATTCTTCCATTCACGAAGTTCTCCG
ATCGATGGGACTGCCGGCGGGGCTGGTACCGAAGCAGGTGAAATCGTACACGCTGGCTGAAAATGGGCGTTTGGAAGTGTATTTGGATGGGCCATGTTTGGCTAAGTATG
AAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGCAAATCTTAGCTATGGGAGCTTGAATGGAGTTGAGGGAATGTCTCAAGAAGAGCTTTTTTTGTGGCTGCCTGTGAAA
GATATCATTGTTAATTATCCCACTTCTGGTGTTGTTCTTATTGATATTGGTGTTGCTCACAAACAGCTCTCTTTGTCCCTTTTTGAAGATCCTCCTGATTGTAGTACCCC
TCAAGTTGAATTGAGGAATCCTCTCAAGAAGAACCAAAGAGGCTTTGAATCTCTTAGATAA
mRNA sequenceShow/hide mRNA sequence
AAAAGCACCCCAAACAAATGATCAACATAGCATTTTTGACAAACTACTAAATGCAAACAAAAAAAAAGAAAAAAAAAAGGCCATTTCCATTTCTCACAAACCTCAAAACA
CAGATGATACTAAAAAACAGTCCACAAACATTTGAGGAATCCCAACCATAGATACCCCCACAAGGGCAGAACCGTAATTCAACAAACCCACATCCACAAGCACATTTGAT
CCTTCCCCTAAAACAGTCCATCACAAAAACCACACTTCCCATAAACCTCAACAAATCTCTCTGAAATTCTGCAGCCATGGCTCTGTTTGGCAACAAGAACTTGAAAGTTT
GGATCTTTATGTTCTTGATGATGGGTTTTTGTGGGTGTAATTGTAAGGATGATTCTTCCATTCACGAAGTTCTCCGATCGATGGGACTGCCGGCGGGGCTGGTACCGAAG
CAGGTGAAATCGTACACGCTGGCTGAAAATGGGCGTTTGGAAGTGTATTTGGATGGGCCATGTTTGGCTAAGTATGAAAACAGAGTGATTTTTGAGAGTGTTTTTAGTGC
AAATCTTAGCTATGGGAGCTTGAATGGAGTTGAGGGAATGTCTCAAGAAGAGCTTTTTTTGTGGCTGCCTGTGAAAGATATCATTGTTAATTATCCCACTTCTGGTGTTG
TTCTTATTGATATTGGTGTTGCTCACAAACAGCTCTCTTTGTCCCTTTTTGAAGATCCTCCTGATTGTAGTACCCCTCAAGTTGAATTGAGGAATCCTCTCAAGAAGAAC
CAAAGAGGCTTTGAATCTCTTAGATAAGAGGGTCAAGGACATTATAAAAAAAAAGTGTCAAATTCAAGTTTCCATCTTTTGTAGTTATATCATTTTTATTTTAATAATTT
TTGTTTTTATTTTTTACTTAAAAGGAAAAAAAAACCCACCAATTTGAGTATATAATGAGAGCTTGTGTGGTGAAACTTTGGAATTAAGTTTCATTTTCTATTATTGTTGT
TGTTTTTTTTTGTTGTTGTGGGAATGGGTGGTTTTGTGTGATATTGATTATGCTTCTATTTGTGGAAA
Protein sequenceShow/hide protein sequence
MALFGNKNLKVWIFMFLMMGFCGCNCKDDSSIHEVLRSMGLPAGLVPKQVKSYTLAENGRLEVYLDGPCLAKYENRVIFESVFSANLSYGSLNGVEGMSQEELFLWLPVK
DIIVNYPTSGVVLIDIGVAHKQLSLSLFEDPPDCSTPQVELRNPLKKNQRGFESLR