; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018827 (gene) of Chayote v1 genome

Gene IDSed0018827
OrganismSechium edule (Chayote v1)
Descriptionhigh mobility group B protein 9
Genome locationLG01:18337435..18340210
RNA-Seq ExpressionSed0018827
SyntenySed0018827
Gene Ontology termsGO:0010197 - polar nucleus fusion (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001606 - ARID DNA-binding domain
IPR009071 - High mobility group box domain
IPR036431 - ARID DNA-binding domain superfamily
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145526.1 high mobility group B protein 9 [Cucumis sativus]3.3e-17290.12Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTW G  DKHYPP+L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF FGSPTSENELALVEYTPKT SFSPGPP+EVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRP S+NAIVPYTGGR++HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERY+RE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+RLGT++  ANYSKHG+
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

XP_008452910.1 PREDICTED: high mobility group B protein 9 [Cucumis melo]1.8e-17390.74Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTW G  DKHYPP L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF+FGSPTSENELALVEYTPKT SFSPGPP+EVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRP S+NAIVPYTGGRH+HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERY+RE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R+GTD+  ANYSKHG+
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

XP_022140929.1 high mobility group B protein 9 [Momordica charantia]1.6e-16989.81Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+W    DKHYP AL+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+F RQGPIC PQ PF+FGSP+SENELALVEYTPKT SFSPGPPAEVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPEQP+P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        S+LRPQS NAIVPYTGGR +HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R  TDIH  NYSKHGE
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

XP_022975460.1 high mobility group B protein 9 isoform X2 [Cucurbita maxima]4.2e-16789.54Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTK+  G  DK YPP L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+F RQGPI  PQ PF+FGSPTSENELALVEYTPKT SFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPE+P P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRPQ +NAIVPYTG RH+HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERYKRE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGT-DIHAANYSKHGE
        LKEYKEK+RL + D+HAANYSK GE
Subjt:  LKEYKEKLRLGT-DIHAANYSKHGE

XP_038899499.1 high mobility group B protein 9-like [Benincasa hispida]3.8e-16889.2Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPA TK+W G  DKHYPP L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF  GSPTSENELALVEYTPKT SFSPGPPAEVTGTIDGKFDCGYLV+VKLGSE+LRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRPQS+NAIVPYTGGR++HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R  +D+    YSKHGE
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

TrEMBL top hitse value%identityAlignment
A0A0A0L181 Uncharacterized protein1.6e-17290.12Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTW G  DKHYPP+L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF FGSPTSENELALVEYTPKT SFSPGPP+EVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHP+QP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRP S+NAIVPYTGGR++HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERY+RE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+RLGT++  ANYSKHG+
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

A0A1S3BUE9 high mobility group B protein 98.6e-17490.74Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTW G  DKHYPP L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF+FGSPTSENELALVEYTPKT SFSPGPP+EVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRP S+NAIVPYTGGRH+HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERY+RE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R+GTD+  ANYSKHG+
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

A0A5A7VAK3 High mobility group B protein 98.6e-17490.74Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTW G  DKHYPP L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF+FGSPTSENELALVEYTPKT SFSPGPP+EVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRP S+NAIVPYTGGRH+HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERY+RE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R+GTD+  ANYSKHG+
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

A0A6J1CH52 high mobility group B protein 97.5e-17089.81Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPAR+K+W    DKHYP AL+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+F RQGPIC PQ PF+FGSP+SENELALVEYTPKT SFSPGPPAEVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPEQP+P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        S+LRPQS NAIVPYTGGR +HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER VYQNIGLKDKERYKRE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R  TDIH  NYSKHGE
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

E5GCD0 High mobility group family8.6e-17490.74Show/hide
Query:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
        MSPPARTKTW G  DKHYPP L+THD V SDP VFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLY+EVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA
Subjt:  MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSA

Query:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP
        SFVLRKHYLSLLYHYEQVY+FGRQGPIC PQ PF+FGSPTSENELALVEYTPKT SFSPGPP+EVTGTIDGKFDCGYLV+VKLGSEVLRGVLYHPEQP P
Subjt:  SFVLRKHYLSLLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAP

Query:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE
        SDLRP S+NAIVPYTGGRH+HSGRR+RRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEER+VYQNIGLKDKERY+RE
Subjt:  SDLRPQSSNAIVPYTGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRE

Query:  LKEYKEKLRLGTDIHAANYSKHGE
        LKEYKEK+R+GTD+  ANYSKHG+
Subjt:  LKEYKEKLRLGTDIHAANYSKHGE

SwissProt top hitse value%identityAlignment
Q68CP9 AT-rich interactive domain-containing protein 21.7e-1446.07Show/hide
Query:  FWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFG
        F D LR+FH    + F  IP +GGKELDLH LYT VT  GG  KV  + +W E+   F F  + ++A+F L+++YL  L  YE+V+ FG
Subjt:  FWDTLRRFHFMMNTKF-MIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFG

Q9LG02 Putative high mobility group B protein 114.9e-4136.01Show/hide
Query:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ
        +  +  +P +FW+ LR FH   + KF IP++GGK LDLH L+ EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F  Q
Subjt:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ

Query:  GPICFPQVPFAFGSPTSENELALVEYTPKT-----PSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQSSNAIVPYTGGRH
         P+          S   E E AL     K+      S    P   +TG IDGKF+ GYL+S K+GSE L+G+LYH        + P++            
Subjt:  GPICFPQVPFAFGSPTSENELALVEYTPKT-----PSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQSSNAIVPYTGGRH

Query:  QHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYK
           G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W  LS  +R VY     +D +RYK E+ +Y+
Subjt:  QHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYK

Q9LTT3 High mobility group B protein 102.1e-5242.47Show/hide
Query:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ
        +D +  +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY     
Subjt:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ

Query:  GPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDLRPQSSNAIVPYTGGRHQH
            + + P +    T E   +L   +P        P    EV G IDGKFD GYLV++KLGS+ L+GVLYH P+ P+ S    ++ +AIV       Q 
Subjt:  GPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDLRPQSSNAIVPYTGGRHQH

Query:  SGRRNRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLG
        S RR+R+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+ L+  E+ VYQ+ G+KD ERY+ E+ EYK     G
Subjt:  SGRRNRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLG

Q9MAT6 High mobility group B protein 152.1e-6844.2Show/hide
Query:  STHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFG
        +T++ V +DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  STHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFG

Query:  RQGPI------------CFPQVPFAFGSPTSENELALVEYTPK----TPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDL
          G I            CF Q     G+     EL  + +TP+    T  F  G  A   V G IDGKF+ GYLV+V +GSE L+GVLY    Q   S  
Subjt:  RQGPI------------CFPQVPFAFGSPTSENELALVEYTPK----TPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDL

Query:  RPQSSNAIVPYT-----------GGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLK
         PQ S+ ++P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WNKL+ +E+++YQ   ++
Subjt:  RPQSSNAIVPYT-----------GGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLK

Query:  DKERYKRELKEYKEKLRLG
        DKERY+ E+++Y+EK + G
Subjt:  DKERYKRELKEYKEKLRLG

Q9SGS2 High mobility group B protein 93.2e-10966.99Show/hide
Query:  KHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  L+ H+ V  D +VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSF-SPGPPAE------VTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQS-
        EQV++F  +GP+  P   F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  EQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSF-SPGPPAE------VTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQS-

Query:  -SNAIVPY--TGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEY
         +NA+VPY  TG R +  G+R RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+ LS EER+VYQ+IGLKDKERY+REL EY
Subjt:  -SNAIVPY--TGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEY

Query:  KEKLRL
        +E LRL
Subjt:  KEKLRL

Arabidopsis top hitse value%identityAlignment
AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain1.5e-6944.2Show/hide
Query:  STHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFG
        +T++ V +DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E++W+EV + F F PT T+AS+VLRK+Y SLL +YEQ+Y F 
Subjt:  STHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFG

Query:  RQGPI------------CFPQVPFAFGSPTSENELALVEYTPK----TPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDL
          G I            CF Q     G+     EL  + +TP+    T  F  G  A   V G IDGKF+ GYLV+V +GSE L+GVLY    Q   S  
Subjt:  RQGPI------------CFPQVPFAFGSPTSENELALVEYTPK----TPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDL

Query:  RPQSSNAIVPYT-----------GGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLK
         PQ S+ ++P T           GG  +   RR +   ++ DP+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WNKL+ +E+++YQ   ++
Subjt:  RPQSSNAIVPYT-----------GGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLK

Query:  DKERYKRELKEYKEKLRLG
        DKERY+ E+++Y+EK + G
Subjt:  DKERYKRELKEYKEKLRLG

AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain3.5e-4236.01Show/hide
Query:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ
        +  +  +P +FW+ LR FH   + KF IP++GGK LDLH L+ EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F  Q
Subjt:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ

Query:  GPICFPQVPFAFGSPTSENELALVEYTPKT-----PSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQSSNAIVPYTGGRH
         P+          S   E E AL     K+      S    P   +TG IDGKF+ GYL+S K+GSE L+G+LYH        + P++            
Subjt:  GPICFPQVPFAFGSPTSENELALVEYTPKT-----PSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQSSNAIVPYTGGRH

Query:  QHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYK
           G++  +S +      PK  R+GYNFF AE+  ++K+    ++    K  G  W  LS  +R VY     +D +RYK E+ +Y+
Subjt:  QHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYK

AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain2.3e-11066.99Show/hide
Query:  KHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY
        K YP  L+ H+ V  D +VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+EKVV EKKWREVG VF+FS TTTSASFVLRKHYL+LL+HY
Subjt:  KHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHY

Query:  EQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSF-SPGPPAE------VTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQS-
        EQV++F  +GP+  P   F   +P++  E+ALVEYTP +  + +  PP++        GTI+GKFDCGYLV VKLGSE+L GVLYH  QP PS   P + 
Subjt:  EQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSF-SPGPPAE------VTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQS-

Query:  -SNAIVPY--TGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEY
         +NA+VPY  TG R +  G+R RRSRR+ DPN+PKPNRSGYNFFFAEKH KLKSLYPN+EREFTK+IGESW+ LS EER+VYQ+IGLKDKERY+REL EY
Subjt:  -SNAIVPY--TGGRHQHSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEY

Query:  KEKLRL
        +E LRL
Subjt:  KEKLRL

AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain1.5e-5342.47Show/hide
Query:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ
        +D +  +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++KW+EV   F F  T TSASFVLRK+YL  L+  E VY     
Subjt:  HDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYMFGRQ

Query:  GPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDLRPQSSNAIVPYTGGRHQH
            + + P +    T E   +L   +P        P    EV G IDGKFD GYLV++KLGS+ L+GVLYH P+ P+ S    ++ +AIV       Q 
Subjt:  GPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPA--EVTGTIDGKFDCGYLVSVKLGSEVLRGVLYH-PEQPAPSDLRPQSSNAIVPYTGGRHQH

Query:  SGRRNRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLG
        S RR+R+  +    D   PK +RSGYNFFFAE++ +LK  Y  +ER  TK IG  W+ L+  E+ VYQ+ G+KD ERY+ E+ EYK     G
Subjt:  SGRRNRRSRRKG--DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLG

AT3G28730.1 high mobility group6.8e-0630Show/hide
Query:  RNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLGTD
        + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W ++S +++  Y+     DK+RYK E+ +YK    +  D
Subjt:  RNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLGTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCGCCGGCCAGGACCAAAACCTGGACCGGCGCCGGAGACAAGCACTACCCGCCGGCGCTGTCCACCCACGACACAGTCTCCTCCGACCCGACCGTTTTCTGGGA
CACCTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATACAGAGGTTACAAGAAGGGGCG
GCCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAAGTGTATTCAAGTTTTCTCCTACAACGACAAGTGCTTCATTTGTATTGAGAAAACATTATCTAAGT
CTTCTTTACCATTACGAGCAAGTTTACATGTTCGGCCGGCAGGGCCCCATCTGTTTCCCTCAAGTGCCATTTGCTTTTGGTAGCCCTACGAGTGAAAACGAATTGGCTCT
GGTGGAATATACTCCCAAAACGCCGTCGTTTTCGCCTGGTCCTCCTGCTGAAGTTACTGGTACTATTGATGGGAAATTCGACTGTGGTTATCTGGTGTCTGTGAAATTGG
GATCTGAGGTTCTGAGAGGAGTACTTTACCATCCCGAACAGCCAGCTCCATCTGATCTACGGCCCCAGTCTTCTAATGCCATTGTCCCTTACACCGGAGGCAGACATCAG
CATTCCGGTCGGCGTAACCGGAGGAGTCGGAGAAAGGGAGACCCGAACCACCCTAAACCGAATAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAA
ATCTCTGTACCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGGAACAAACTCAGCCCTGAAGAAAGGGTGGTTTATCAAAACATTGGGCTCAAAGACA
AGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAAGAGAAATTGAGGTTGGGAACTGATATTCATGCAGCTAATTATTCAAAACATGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCGCCGGCCAGGACCAAAACCTGGACCGGCGCCGGAGACAAGCACTACCCGCCGGCGCTGTCCACCCACGACACAGTCTCCTCCGACCCGACCGTTTTCTGGGA
CACCTTGAGGCGTTTCCATTTTATGATGAACACAAAGTTCATGATTCCTGTGATTGGAGGGAAGGAGCTAGACTTGCATGTTTTATATACAGAGGTTACAAGAAGGGGCG
GCCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAAGTGTATTCAAGTTTTCTCCTACAACGACAAGTGCTTCATTTGTATTGAGAAAACATTATCTAAGT
CTTCTTTACCATTACGAGCAAGTTTACATGTTCGGCCGGCAGGGCCCCATCTGTTTCCCTCAAGTGCCATTTGCTTTTGGTAGCCCTACGAGTGAAAACGAATTGGCTCT
GGTGGAATATACTCCCAAAACGCCGTCGTTTTCGCCTGGTCCTCCTGCTGAAGTTACTGGTACTATTGATGGGAAATTCGACTGTGGTTATCTGGTGTCTGTGAAATTGG
GATCTGAGGTTCTGAGAGGAGTACTTTACCATCCCGAACAGCCAGCTCCATCTGATCTACGGCCCCAGTCTTCTAATGCCATTGTCCCTTACACCGGAGGCAGACATCAG
CATTCCGGTCGGCGTAACCGGAGGAGTCGGAGAAAGGGAGACCCGAACCACCCTAAACCGAATAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAA
ATCTCTGTACCCAAACAGAGAGAGGGAGTTCACTAAGATGATTGGAGAGTCTTGGAACAAACTCAGCCCTGAAGAAAGGGTGGTTTATCAAAACATTGGGCTCAAAGACA
AGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAAGAGAAATTGAGGTTGGGAACTGATATTCATGCAGCTAATTATTCAAAACATGGAGAGTAG
Protein sequenceShow/hide protein sequence
MSPPARTKTWTGAGDKHYPPALSTHDTVSSDPTVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYTEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLS
LLYHYEQVYMFGRQGPICFPQVPFAFGSPTSENELALVEYTPKTPSFSPGPPAEVTGTIDGKFDCGYLVSVKLGSEVLRGVLYHPEQPAPSDLRPQSSNAIVPYTGGRHQ
HSGRRNRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERVVYQNIGLKDKERYKRELKEYKEKLRLGTDIHAANYSKHGE