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Sed0018831 (gene) of Chayote v1 genome

Gene IDSed0018831
OrganismSechium edule (Chayote v1)
DescriptionTwo-component response regulator
Genome locationLG10:31170713..31173136
RNA-Seq ExpressionSed0018831
SyntenySed0018831
Gene Ontology termsGO:0000160 - phosphorelay signal transduction system (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063504.1 two-component response regulator ARR12-like [Cucumis melo var. makuwa]9.1e-0444.87Show/hide
Query:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG
        + AF GK T FR +ASL+GFSMTGTG LS+ATFS Y SR +       A + L  ++SS    ++ S +L+N    +G
Subjt:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG

KAA0063504.1 two-component response regulator ARR12-like [Cucumis melo var. makuwa]1.0e-4753.39Show/hide
Query:  SIASLDGFSMTG---TGELSDATFSSYHSRVLQFPPASVMLEPVSSSSNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNG
        S++++ G S +     G +    FSS  S    +PP  +          Y  +SSA+ +N+NF VGF  TS DSSS L L G+TQC EELIG++VEA NG
Subjt:  SIASLDGFSMTG---TGELSDATFSSYHSRVLQFPPASVMLEPVSSSSNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNG

Query:  RSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASS
        RSKQQWEAAK  YYGNHSS++R+S VSGNSVADP+   SA+Q NAIC  N+ SS TNQ           G EISTM+TWMNYDGKI MD  KLQ+G +SS
Subjt:  RSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASS

Query:  SFNALGELVNAQSKQEENENV
        SFN+L ELVNA SKQ++++++
Subjt:  SFNALGELVNAQSKQEENENV

XP_008457369.1 PREDICTED: two-component response regulator ARR12-like [Cucumis melo]4.2e-4956.52Show/hide
Query:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY
        HS+  +  P+S+ L   SSS             + Y  +SS + +++NF +GF  TS DSSSQL L G+TQC EELIG++VEA NGRSKQQWEAAK  YY
Subjt:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY

Query:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK
         NHSSI+R+SLVSGNSVADP+N  SA+Q NAIC  NI SS TNQ           G EISTM+TW+NYDGKILMD  KLQ+G A+SSFN+L ELVNA SK
Subjt:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK

Query:  QEENENV
        Q++++++
Subjt:  QEENENV

XP_008457369.1 PREDICTED: two-component response regulator ARR12-like [Cucumis melo]9.1e-0444.87Show/hide
Query:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG
        + AF GK T FR +ASL+GFSMTGTG LS+ATFS Y SR +       A + L  ++SS    ++ S +L+N    +G
Subjt:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG

XP_008457369.1 PREDICTED: two-component response regulator ARR12-like [Cucumis melo]4.2e-4956.52Show/hide
Query:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY
        HS+  +  P+S+ L   SSS             + Y  +SS + +++NF +GF  TS DSSSQL L G+TQC EELIG++VEA NGRSKQQWEAAK  YY
Subjt:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY

Query:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK
         NHSSI+R+SLVSGNSVADP+N  SA+Q NAIC  NI SS TNQ           G EISTM+TW+NYDGKILMD  KLQ+G A+SSFN+L ELVNA SK
Subjt:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK

Query:  QEENENV
        Q++++++
Subjt:  QEENENV

XP_022938161.1 two-component response regulator ORR24-like [Cucurbita moschata]1.5e-0680Show/hide
Query:  MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSR
        M+AAF GKDTSFR +ASL+GFSMTGTG LS+ATFSSY SR
Subjt:  MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSR

XP_023537616.1 two-component response regulator ORR24-like [Cucurbita pepo subsp. pepo]3.5e-4063.95Show/hide
Query:  VSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENID
        +SSA+ +NENF VGF  TSVDSSSQL L GETQC +EL+  +V+AMN RSKQQWE AK  YYGNHSSILRNSLVSGNSVADP++PSSA   NAIC ENI 
Subjt:  VSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENID

Query:  SSLTN-----------QGTEISTMDTWMNYDGKILMDSRKLQNGLAS
        SSLTN           Q  E   M+TWMN+DGK LMD  KL    +S
Subjt:  SSLTN-----------QGTEISTMDTWMNYDGKILMDSRKLQNGLAS

XP_023537616.1 two-component response regulator ORR24-like [Cucurbita pepo subsp. pepo]1.5e-0680Show/hide
Query:  MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSR
        M+AAF GKDTSFR +ASL+GFSMTGTG LS+ATFSSY SR
Subjt:  MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSR

XP_023537616.1 two-component response regulator ORR24-like [Cucurbita pepo subsp. pepo]3.5e-4063.95Show/hide
Query:  VSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENID
        +SSA+ +NENF VGF  TSVDSSSQL L GETQC +EL+  +V+AMN RSKQQWE AK  YYGNHSSILRNSLVSGNSVADP++PSSA   NAIC ENI 
Subjt:  VSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENID

Query:  SSLTN-----------QGTEISTMDTWMNYDGKILMDSRKLQNGLAS
        SSLTN           Q  E   M+TWMN+DGK LMD  KL    +S
Subjt:  SSLTN-----------QGTEISTMDTWMNYDGKILMDSRKLQNGLAS

TrEMBL top hitse value%identityAlignment
A0A1S3C613 two-component response regulator ARR12-like4.4e-0444.87Show/hide
Query:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG
        + AF GK T FR +ASL+GFSMTGTG LS+ATFS Y SR +       A + L  ++SS    ++ S +L+N    +G
Subjt:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG

A0A1S3C613 two-component response regulator ARR12-like5.0e-4853.39Show/hide
Query:  SIASLDGFSMTG---TGELSDATFSSYHSRVLQFPPASVMLEPVSSSSNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNG
        S++++ G S +     G +    FSS  S    +PP  +          Y  +SSA+ +N+NF VGF  TS DSSS L L G+TQC EELIG++VEA NG
Subjt:  SIASLDGFSMTG---TGELSDATFSSYHSRVLQFPPASVMLEPVSSSSNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNG

Query:  RSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASS
        RSKQQWEAAK  YYGNHSS++R+S VSGNSVADP+   SA+Q NAIC  N+ SS TNQ           G EISTM+TWMNYDGKI MD  KLQ+G +SS
Subjt:  RSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASS

Query:  SFNALGELVNAQSKQEENENV
        SFN+L ELVNA SKQ++++++
Subjt:  SFNALGELVNAQSKQEENENV

A0A5A7V8H6 Two-component response regulator ARR12-like2.0e-4956.52Show/hide
Query:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY
        HS+  +  P+S+ L   SSS             + Y  +SS + +++NF +GF  TS DSSSQL L G+TQC EELIG++VEA NGRSKQQWEAAK  YY
Subjt:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY

Query:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK
         NHSSI+R+SLVSGNSVADP+N  SA+Q NAIC  NI SS TNQ           G EISTM+TW+NYDGKILMD  KLQ+G A+SSFN+L ELVNA SK
Subjt:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK

Query:  QEENENV
        Q++++++
Subjt:  QEENENV

A0A5A7V8H6 Two-component response regulator ARR12-like4.4e-0444.87Show/hide
Query:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG
        + AF GK T FR +ASL+GFSMTGTG LS+ATFS Y SR +       A + L  ++SS    ++ S +L+N    +G
Subjt:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG

A0A5A7V8H6 Two-component response regulator ARR12-like2.0e-4956.52Show/hide
Query:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY
        HS+  +  P+S+ L   SSS             + Y  +SS + +++NF +GF  TS DSSSQL L G+TQC EELIG++VEA NGRSKQQWEAAK  YY
Subjt:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY

Query:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK
         NHSSI+R+SLVSGNSVADP+N  SA+Q NAIC  NI SS TNQ           G EISTM+TW+NYDGKILMD  KLQ+G A+SSFN+L ELVNA SK
Subjt:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK

Query:  QEENENV
        Q++++++
Subjt:  QEENENV

A0A5D3BGQ5 Two-component response regulator ARR12-like4.4e-0444.87Show/hide
Query:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG
        + AF GK T FR +ASL+GFSMTGTG LS+ATFS Y SR +       A + L  ++SS    ++ S +L+N    +G
Subjt:  LAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVL---QFPPASVMLEPVSSSSNYDLVSSARLNNENFHVG

A0A5D3BGQ5 Two-component response regulator ARR12-like2.0e-4956.52Show/hide
Query:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY
        HS+  +  P+S+ L   SSS             + Y  +SS + +++NF +GF  TS DSSSQL L G+TQC EELIG++VEA NGRSKQQWEAAK  YY
Subjt:  HSRVLQFPPASVMLEPVSSS-------------SNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYY

Query:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK
         NHSSI+R+SLVSGNSVADP+N  SA+Q NAIC  NI SS TNQ           G EISTM+TW+NYDGKILMD  KLQ+G A+SSFN+L ELVNA SK
Subjt:  GNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQ-----------GTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSK

Query:  QEENENV
        Q++++++
Subjt:  QEENENV

A0A6J1FCC6 Two-component response regulator1.7e-4063.95Show/hide
Query:  VSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENID
        +SSA+ +NENF VGF  TSVDSSSQL L GETQC +EL+  +V+AMN RSKQQWE AK  YYGNHSSILRNSLVSGNSVADP++PSSA   NAIC ENI 
Subjt:  VSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNGRSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENID

Query:  SSLTN-----------QGTEISTMDTWMNYDGKILMDSRKLQNGLAS
        SSLTN           Q  E   M+TWMN+DGK LMD  KL    +S
Subjt:  SSLTN-----------QGTEISTMDTWMNYDGKILMDSRKLQNGLAS

A0A6J1FCC6 Two-component response regulator7.3e-0780Show/hide
Query:  MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSR
        M+AAF GKDTSFR +ASL+GFSMTGTG LS+ATFSSY SR
Subjt:  MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCTGCATTTGAAGGTAAAGACACCTCCTTCAGGTCCATAGCTTCACTTGATGGATTTTCAATGACTGGAACAGGAGAGCTCTCGGATGCTACATTTTCGTCGTA
TCATTCTCGAGTTTTACAGTTTCCACCAGCTTCCGTGATGCTCGAGCCCGTTAGTAGCTCGAGCAATTATGACTTAGTTTCTTCGGCTCGGCTCAATAACGAAAACTTTC
ATGTTGGTTTTTCTCCAACAAGTGTGGACTCGAGTTCTCAACTTGGTTTGACAGGGGAGACACAATGCTGCGAAGAACTAATTGGAAATATTGTTGAAGCCATGAATGGC
AGATCAAAGCAACAATGGGAAGCAGCTAAACACGGTTATTATGGCAACCATAGTTCTATATTGAGAAACTCTCTAGTTTCTGGGAATAGTGTTGCAGATCCCATGAATCC
AAGTTCAGCACATCAGACCAATGCAATCTGTTTCGAGAACATCGATAGTTCTTTGACTAACCAAGGTACGGAAATATCGACCATGGATACTTGGATGAACTACGATGGAA
AAATTCTCATGGATTCAAGAAAGCTGCAGAATGGACTTGCAAGTTCTAGTTTTAATGCATTGGGTGAACTGGTGAATGCTCAGTCAAAACAGGAGGAAAATGAGAACGTT
ATGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCTGCATTTGAAGGTAAAGACACCTCCTTCAGGTCCATAGCTTCACTTGATGGATTTTCAATGACTGGAACAGGAGAGCTCTCGGATGCTACATTTTCGTCGTA
TCATTCTCGAGTTTTACAGTTTCCACCAGCTTCCGTGATGCTCGAGCCCGTTAGTAGCTCGAGCAATTATGACTTAGTTTCTTCGGCTCGGCTCAATAACGAAAACTTTC
ATGTTGGTTTTTCTCCAACAAGTGTGGACTCGAGTTCTCAACTTGGTTTGACAGGGGAGACACAATGCTGCGAAGAACTAATTGGAAATATTGTTGAAGCCATGAATGGC
AGATCAAAGCAACAATGGGAAGCAGCTAAACACGGTTATTATGGCAACCATAGTTCTATATTGAGAAACTCTCTAGTTTCTGGGAATAGTGTTGCAGATCCCATGAATCC
AAGTTCAGCACATCAGACCAATGCAATCTGTTTCGAGAACATCGATAGTTCTTTGACTAACCAAGGTACGGAAATATCGACCATGGATACTTGGATGAACTACGATGGAA
AAATTCTCATGGATTCAAGAAAGCTGCAGAATGGACTTGCAAGTTCTAGTTTTAATGCATTGGGTGAACTGGTGAATGCTCAGTCAAAACAGGAGGAAAATGAGAACGTT
ATGCCTTGA
Protein sequenceShow/hide protein sequence
MLAAFEGKDTSFRSIASLDGFSMTGTGELSDATFSSYHSRVLQFPPASVMLEPVSSSSNYDLVSSARLNNENFHVGFSPTSVDSSSQLGLTGETQCCEELIGNIVEAMNG
RSKQQWEAAKHGYYGNHSSILRNSLVSGNSVADPMNPSSAHQTNAICFENIDSSLTNQGTEISTMDTWMNYDGKILMDSRKLQNGLASSSFNALGELVNAQSKQEENENV
MP