; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018837 (gene) of Chayote v1 genome

Gene IDSed0018837
OrganismSechium edule (Chayote v1)
DescriptionZinc finger BED domain-containing protein DAYSLEEPER-like
Genome locationLG07:16494122..16497913
RNA-Seq ExpressionSed0018837
SyntenySed0018837
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0043039 - tRNA aminoacylation (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44253.1 hypothetical protein Csa_016011 [Cucumis sativus]2.0e-2451.69Show/hide
Query:  KFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSN------------NEAESSCSLMEVNYKSTPIDVKVLE
        ++EKYWSVIHGV  +AT+LDP+FKMRLIEFYF +IYGSHY VEI+RV++LC DL+K YSS S+            ++ + S S   +  K TP+D KVLE
Subjt:  KFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSN------------NEAESSCSLMEVNYKSTPIDVKVLE

Query:  TILQDQNSDDKVRFPVPI
         +  DQ+ DD   FP  +
Subjt:  TILQDQNSDDKVRFPVPI

TYK23151.1 zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]4.8e-1867.14Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAE
        MI+KFEKYWSVIH    +AT LDPKFKMRLIEFYFP+IY SHY  EI+RV++LC DL+ +YSS S    E
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAE

XP_030494740.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cannabis sativa]4.9e-1555.88Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNE
        M+ KFE+YW+ IHG+  +AT+LDP+FKM+LIE+YFPKIY   Y  E++R++ LC DL+K Y SN   E
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNE

XP_030505226.1 zinc finger BED domain-containing protein RICESLEEPER 2 [Cannabis sativa]4.9e-1555.88Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNE
        M+ KFE+YW+ IHG+  +AT+LDP+FKM+LIE+YFPKIY   Y  E++R++ LC DL+K Y SN   E
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNE

XP_038884881.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]1.2e-2172.86Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAE
        MIAKFEKYWSVIHGV  +AT+LDP+FKMRLI+FYFP+IYG H++VEI+RV+DLC DL+K+YSSNS    E
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAE

TrEMBL top hitse value%identityAlignment
A0A0A0K403 DUF4413 domain-containing protein9.6e-2551.69Show/hide
Query:  KFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSN------------NEAESSCSLMEVNYKSTPIDVKVLE
        ++EKYWSVIHGV  +AT+LDP+FKMRLIEFYF +IYGSHY VEI+RV++LC DL+K YSS S+            ++ + S S   +  K TP+D KVLE
Subjt:  KFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSN------------NEAESSCSLMEVNYKSTPIDVKVLE

Query:  TILQDQNSDDKVRFPVPI
         +  DQ+ DD   FP  +
Subjt:  TILQDQNSDDKVRFPVPI

A0A5C7HKE4 Uncharacterized protein6.9e-1547.25Show/hide
Query:  IAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSN------NEAESSCSLMEVNYKSTPID
        IAKFEKYW+VI+G+  VAT+LDP+FKM+++EFYFP IYG + S E+++V+ LC  L+K Y  NS       +  +SSCS   ++     +D
Subjt:  IAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSN------NEAESSCSLMEVNYKSTPID

A0A5C7IUL5 BED-type domain-containing protein1.5e-1451.9Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYY----SSNSNNEAESSCSL
        MI  FEKYW VIHGV  +AT+LDP++KMRLIEFYFP I+G++Y   ++ ++ LC DL+K Y     S   N   S+ SL
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYY----SSNSNNEAESSCSL

A0A5D3DHK7 Zinc finger BED domain-containing protein DAYSLEEPER-like2.3e-1867.14Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAE
        MI+KFEKYWSVIH    +AT LDPKFKMRLIEFYFP+IY SHY  EI+RV++LC DL+ +YSS S    E
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAE

A0A803PTU2 Uncharacterized protein1.5e-1452.94Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNE
        M+ KFE+YW+ IHG+  +AT+LDP+FKM+LIE+YFPK+Y   Y  E++R++ LC DL+K Y  N   E
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNE

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.3e-0637.7Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYY
        M  +F+KYW   + V  +A ++DP+FKM+L+EF + KIYG   +  ++ V D   +L   Y
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYY

P03010 Putative AC9 transposase1.8e-0743.08Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNS
        M  KFEKYW V +    VA  LDP++K  LIEFY  K +G  Y V +     + + L ++YSS S
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNS

P08770 Putative AC transposase1.8e-0743.08Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNS
        M  KFEKYW V +    VA  LDP++K  LIEFY  K +G  Y V +     + + L ++YSS S
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNS

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 43.3e-0639.34Show/hide
Query:  KFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVE-IQRVKDLCKDLIKYYSS
        KF+KYW   + V  +A  +DP+FKM+++EF + KIYG   + + ++ V D   DL K Y++
Subjt:  KFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVE-IQRVKDLCKDLIKYYSS

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 28.7e-0739.34Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYY
        M  +F+KYW   + V  +A ++DP+FKM+L+EF + KIYG   +  ++ V D   +L K Y
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYY

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain2.6e-0630.48Show/hide
Query:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSS-----NSNNEAESSCSLMEVNYKSTPIDVKVLETILQ
        M  K +KYW     V  +A ++DP+FKM+L+EF F KI+G      I+ V D   +L   Y +     N+ +E   +  L +        D  ++ET  Q
Subjt:  MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSS-----NSNNEAESSCSLMEVNYKSTPIDVKVLETILQ

Query:  DQNSD
        +  S+
Subjt:  DQNSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTTGTTGTAGCAACCATTTTGGATCCTAAGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAA
AATCTACGGATCACATTATAGTGTGGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTT
CTTTGATGGAGGTGAATTATAAATCTACTCCAATAGATGTCAAAGTATTGGAAACTATTCTCCAAGACCAGAATTCAGATGATAAGGTAAGATTTCCTGTCCCCATCCCC
ACAAAAAATGGTGAATTTTGTGGGAACGAGGATTATATTTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCTAAGTTCGAAAAATATTGGAGTGTGATACATGGTGTTTTTGTTGTAGCAACCATTTTGGATCCTAAGTTTAAGATGAGACTGATTGAATTTTATTTTCCTAA
AATCTACGGATCACATTATAGTGTGGAAATTCAACGTGTTAAAGATTTGTGCAAAGATTTGATAAAGTATTATAGTTCAAATTCTAATAATGAAGCAGAATCTTCATGTT
CTTTGATGGAGGTGAATTATAAATCTACTCCAATAGATGTCAAAGTATTGGAAACTATTCTCCAAGACCAGAATTCAGATGATAAGGTAAGATTTCCTGTCCCCATCCCC
ACAAAAAATGGTGAATTTTGTGGGAACGAGGATTATATTTGGTAG
Protein sequenceShow/hide protein sequence
MIAKFEKYWSVIHGVFVVATILDPKFKMRLIEFYFPKIYGSHYSVEIQRVKDLCKDLIKYYSSNSNNEAESSCSLMEVNYKSTPIDVKVLETILQDQNSDDKVRFPVPIP
TKNGEFCGNEDYIW