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Sed0018859 (gene) of Chayote v1 genome

Gene IDSed0018859
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin carboxyl-terminal hydrolase, putative isoform 1
Genome locationLG05:45883871..45885566
RNA-Seq ExpressionSed0018859
SyntenySed0018859
Gene Ontology termsGO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR039337 - Protein GOLVEN 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045905.1 Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa]6.8e-1353.33Show/hide
Query:  MAVLPCKRILV---LVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDL-KVHG----EEHFTNTDDLVTMDYTPASRKPPIHN
        MA+LPCKRIL+   L+ + L CF NT +AARS+GV E+KN     E    ++ D+ KVH     E +F++TDDL  MDYTPAS+KPPIHN
Subjt:  MAVLPCKRILV---LVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDL-KVHG----EEHFTNTDDLVTMDYTPASRKPPIHN

KAG6571377.1 hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1460.53Show/hide
Query:  KRILVLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN
        KR+LVLV V LC F N  +A RSLGVP+IK ++   + N+    DL VH EEHF++TDDL  MDYTPAS+KPPIHN
Subjt:  KRILVLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN

KAG6605281.1 hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1256.63Show/hide
Query:  PCKR---ILVLVFVFLCCFLNTTMAARSL--GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN
        PCKR   +L+++ V L CF NT + ARSL  GVP+IK +    +++ KVDGDL V  EEHF +T DLV MDYT AS+KPPIHN
Subjt:  PCKR---ILVLVFVFLCCFLNTTMAARSL--GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN

KGN62102.1 hypothetical protein Csa_006036 [Cucumis sativus]6.1e-1457.61Show/hide
Query:  MAVLPCKRIL---VLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKV----DGDLKVHG---EEHFTNTDDLVTMDYTPASRKPPIHN
        MA+LPCKRIL   VL+ V LCCF N  +AARS+GV E+KN +     NEKV    D   KVH    E +F++TDDL  MDYTPAS+KPPIHN
Subjt:  MAVLPCKRIL---VLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKV----DGDLKVHG---EEHFTNTDDLVTMDYTPASRKPPIHN

OMO55899.1 hypothetical protein CCACVL1_26910 [Corchorus capsularis]1.2e-0646.99Show/hide
Query:  MAVLPCKRILVLVFVFLCCFLNTTMAARSL-GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN
        MA +PCK  L+LV  FL CF+ TT  AR++   P+  +   VH+  + V    K +G     N D+LV+MDYTPA+RKPPIHN
Subjt:  MAVLPCKRILVLVFVFLCCFLNTTMAARSL-GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN

TrEMBL top hitse value%identityAlignment
A0A0A0LMV6 Uncharacterized protein3.0e-1457.61Show/hide
Query:  MAVLPCKRIL---VLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKV----DGDLKVHG---EEHFTNTDDLVTMDYTPASRKPPIHN
        MA+LPCKRIL   VL+ V LCCF N  +AARS+GV E+KN +     NEKV    D   KVH    E +F++TDDL  MDYTPAS+KPPIHN
Subjt:  MAVLPCKRIL---VLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKV----DGDLKVHG---EEHFTNTDDLVTMDYTPASRKPPIHN

A0A1R3GCU1 Uncharacterized protein6.0e-0746.99Show/hide
Query:  MAVLPCKRILVLVFVFLCCFLNTTMAARSL-GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN
        MA +PCK  L+LV  FL CF+ TT  AR++   P+  +   VH+  + V    K +G     N D+LV+MDYTPA+RKPPIHN
Subjt:  MAVLPCKRILVLVFVFLCCFLNTTMAARSL-GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN

A0A1R3IMA3 Uncharacterized protein6.0e-0746.99Show/hide
Query:  MAVLPCKRILVLVFVFLCCFLNTTMAARSL-GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN
        MA +PCK  L+LV  FL CF+ TT  AR++   P+  +   VH+  + V    K +G     N D+LV+MDYTPA+RKPPIHN
Subjt:  MAVLPCKRILVLVFVFLCCFLNTTMAARSL-GVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN

A0A5A7TWX6 Root meristem growth factor 9-like protein3.3e-1353.33Show/hide
Query:  MAVLPCKRILV---LVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDL-KVHG----EEHFTNTDDLVTMDYTPASRKPPIHN
        MA+LPCKRIL+   L+ + L CF NT +AARS+GV E+KN     E    ++ D+ KVH     E +F++TDDL  MDYTPAS+KPPIHN
Subjt:  MAVLPCKRILV---LVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDL-KVHG----EEHFTNTDDLVTMDYTPASRKPPIHN

A0A7J9DK90 Uncharacterized protein6.0e-0747.56Show/hide
Query:  MAVLPCKRILVLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN
        MA +PCK +++  F FL  F++TT  AR+L  PE K     H++ E      K HGE +  + D+LV+MDYTPA+RKPPIHN
Subjt:  MAVLPCKRILVLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCTTCCATGCAAACGCATCCTCGTCCTCGTCTTCGTCTTCCTTTGTTGTTTCTTAAACACAACTATGGCAGCAAGAAGCTTGGGAGTACCTGAGATTAAGAA
TAACAATGATGTTCATGAGAATAATGAGAAAGTAGATGGTGATCTTAAAGTTCATGGTGAAGAACACTTCACAAACACTGATGATTTGGTAACAATGGATTATACTCCAG
CTTCCAGAAAGCCTCCAATCCACAACTGA
mRNA sequenceShow/hide mRNA sequence
CACCTTCTTCACACAAAAACAAGCCTTTCCATTTTGTATCATCACAAGAACAAAATTCAAAAAGGCAAAACACACAAAGTCTTCGATGGCTGTGCTTCCATGCAAACGCA
TCCTCGTCCTCGTCTTCGTCTTCCTTTGTTGTTTCTTAAACACAACTATGGCAGCAAGAAGCTTGGGAGTACCTGAGATTAAGAATAACAATGATGTTCATGAGAATAAT
GAGAAAGTAGATGGTGATCTTAAAGTTCATGGTGAAGAACACTTCACAAACACTGATGATTTGGTAACAATGGATTATACTCCAGCTTCCAGAAAGCCTCCAATCCACAA
CTGAGGCATAATTTGTACAAAACTCAAACTCAAAGAGAGTTCTATTTTATAATTAATTTGTATCATATATTTTACATCTGTATTTTTCTTTTTATTTTTGTTTATATTAA
TGAAGCTTCGAGTAATGAATTATACAGAAATGGAATAAATATATGAGCTAAACATCAAACAATGGGG
Protein sequenceShow/hide protein sequence
MAVLPCKRILVLVFVFLCCFLNTTMAARSLGVPEIKNNNDVHENNEKVDGDLKVHGEEHFTNTDDLVTMDYTPASRKPPIHN