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Sed0018867 (gene) of Chayote v1 genome

Gene IDSed0018867
OrganismSechium edule (Chayote v1)
Descriptionp55
Genome locationLG01:10896687..10897346
RNA-Seq ExpressionSed0018867
SyntenySed0018867
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056836.1 p55 [Cucumis melo var. makuwa]9.5e-0435.29Show/hide
Query:  PPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKPRIPMPSKANE----GLDEPK-------------MKSMIADLEHMVKMLK-WAEGTKGWMSDPVMACL
        PP SP RKN       ++++P TP      K+P    P+  +E       +PK             MK +I  +E M+KMLK         +SDP++AC 
Subjt:  PPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKPRIPMPSKANE----GLDEPK-------------MKSMIADLEHMVKMLK-WAEGTKGWMSDPVMACL

Query:  ISAQTVVIACTAELMSRTT
        +SAQT+++ACTAEL+S++T
Subjt:  ISAQTVVIACTAELMSRTT
KGN64496.1 hypothetical protein Csa_013860 [Cucumis sativus]3.5e-0634.93Show/hide
Query:  GLIPPPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKP------------RIPMPSKANEGLDEPK-----MKSMIADLEHMVKMLKWAEGTKG-WMSDPV
        G+  PP+SP +KN    P +++++P TP   +  K+P            R P   +  +  +E       MK +I  +E MVKMLK     K   +SDP+
Subjt:  GLIPPPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKP------------RIPMPSKANEGLDEPK-----MKSMIADLEHMVKMLKWAEGTKG-WMSDPV

Query:  MACLISAQTVVIACTAELMSRTTRP--------QPLKIKASSTKTA
        +AC +SAQ ++ ACTAEL+SR+TR           L I   ST TA
Subjt:  MACLISAQTVVIACTAELMSRTTRP--------QPLKIKASSTKTA
TrEMBL top hitse value%identityAlignment
A0A0A0LX14 p551.7e-0634.93Show/hide
Query:  GLIPPPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKP------------RIPMPSKANEGLDEPK-----MKSMIADLEHMVKMLKWAEGTKG-WMSDPV
        G+  PP+SP +KN    P +++++P TP   +  K+P            R P   +  +  +E       MK +I  +E MVKMLK     K   +SDP+
Subjt:  GLIPPPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKP------------RIPMPSKANEGLDEPK-----MKSMIADLEHMVKMLKWAEGTKG-WMSDPV

Query:  MACLISAQTVVIACTAELMSRTTRP--------QPLKIKASSTKTA
        +AC +SAQ ++ ACTAEL+SR+TR           L I   ST TA
Subjt:  MACLISAQTVVIACTAELMSRTTRP--------QPLKIKASSTKTA
A0A5D3BJN2 p554.6e-0435.29Show/hide
Query:  PPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKPRIPMPSKANE----GLDEPK-------------MKSMIADLEHMVKMLK-WAEGTKGWMSDPVMACL
        PP SP RKN       ++++P TP      K+P    P+  +E       +PK             MK +I  +E M+KMLK         +SDP++AC 
Subjt:  PPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKPRIPMPSKANE----GLDEPK-------------MKSMIADLEHMVKMLK-WAEGTKGWMSDPVMACL

Query:  ISAQTVVIACTAELMSRTT
        +SAQT+++ACTAEL+S++T
Subjt:  ISAQTVVIACTAELMSRTT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAACCCAATGGAAAAGGACTGATCCCTCCCCCAGCATCACCCCCTCGCAAAAACAAAAGACCCAATCCGTCCCAAACGACGCTTGACCCGGACACTCCCCCGCA
GAACAATGCTATTAAGAAGCCACGAATCCCTATGCCATCGAAAGCTAACGAAGGGCTGGACGAACCGAAAATGAAGAGTATGATAGCCGACCTGGAGCACATGGTTAAGA
TGCTGAAATGGGCGGAAGGAACGAAGGGCTGGATGAGTGATCCTGTGATGGCTTGCCTTATTTCTGCGCAGACTGTTGTCATAGCATGCACGGCTGAACTTATGTCCAGA
ACCACAAGGCCACAACCTCTTAAGATTAAAGCTTCTTCTACTAAAACAGCTCCTAACAACTTACAAATATCCAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
GAAGCTGAAGGTGGTAGAGAAGCAATTAGGGTTTCAAAACCCCAGGCCATGGACAAACCCAATGGAAAAGGACTGATCCCTCCCCCAGCATCACCCCCTCGCAAAAACAA
AAGACCCAATCCGTCCCAAACGACGCTTGACCCGGACACTCCCCCGCAGAACAATGCTATTAAGAAGCCACGAATCCCTATGCCATCGAAAGCTAACGAAGGGCTGGACG
AACCGAAAATGAAGAGTATGATAGCCGACCTGGAGCACATGGTTAAGATGCTGAAATGGGCGGAAGGAACGAAGGGCTGGATGAGTGATCCTGTGATGGCTTGCCTTATT
TCTGCGCAGACTGTTGTCATAGCATGCACGGCTGAACTTATGTCCAGAACCACAAGGCCACAACCTCTTAAGATTAAAGCTTCTTCTACTAAAACAGCTCCTAACAACTT
ACAAATATCCAAGAATTAGTTTTTGTTGTTTGTAAGCTTTGATGGATCCACATCTCGTGGTCTCGTTTATGCTTTTTTCATCTGTTTTTCAATGGAAGTTTAAGTTTAGG
CTTGTAATTTCCACCAATTTTCTATGGTAGAATTAATAATTGTTGTAAGCTATGTAATCTCGACTTACCTATGGTAGAACCTAACTTTATATGGGTGAAATTCGTCCAAA
Protein sequenceShow/hide protein sequence
MDKPNGKGLIPPPASPPRKNKRPNPSQTTLDPDTPPQNNAIKKPRIPMPSKANEGLDEPKMKSMIADLEHMVKMLKWAEGTKGWMSDPVMACLISAQTVVIACTAELMSR
TTRPQPLKIKASSTKTAPNNLQISKN