; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018869 (gene) of Chayote v1 genome

Gene IDSed0018869
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG05:43850340..43851412
RNA-Seq ExpressionSed0018869
SyntenySed0018869
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604930.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-9261.54Show/hide
Query:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD
        RG+N  IR+VWA N   EI   DR L SY+++SIDTEFPG +++TP G++DE+L+ DFRFNVNQTK++QLGVT  +E G IGGTWEFNFS FDPE D  +
Subjt:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD

Query:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK
        P+SI FL+QNGLDF KLK +GI    FA  F   +RK+ I+RW+TFHGLYDIGYLM AMG+++ LPE++  F  +V R VG VRDLK+MARFC+GLE G 
Subjt:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK

Query:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI
        LGLE++GQLLDQKRFGL+HHAGSDS++TA+LH +M++R+   +  CDGFLYG S   E +
Subjt:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI

KAG7027009.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-9261.54Show/hide
Query:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD
        RG+N  IR+VWA N   EI   DR L SY+++SIDTEFPG +++TP G++DE+L+ DFRFNVNQTK++QLGVT  +E G IGGTWEFNFS FDPE D  +
Subjt:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD

Query:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK
        P+SI FL+QNGLDF KLK +GI    FA  F   +RK+ I+RW+TFHGLYDIGYLM AMG+++ LPE++  F  +V R VG VRDLK+MARFC+GLE G 
Subjt:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK

Query:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI
        LGLE++GQLLDQKRFGL+HHAGSDS++TA+LH +M++R+   +  CDGFLYG S   E +
Subjt:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI

XP_022947868.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]7.4e-9262.31Show/hide
Query:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD
        RG+N  IR+VWA N   EI   DR L SY+I+SIDTEFPG +++TP G+ DE+L+ DFRFNVNQTK++QLGVT  +ESG IGGTWEFNFS FDPE D  +
Subjt:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD

Query:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK
        P+SI FL+QNGLDF KLK +GI    FA  F   + K+ I+RWVTFHGLYDIGYLM AMG+++ LPE++  F  +V R VG VRDLK+MARFC+GLE G 
Subjt:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK

Query:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI
        LGLE++GQLLDQKRFGL+HHAGSDS++TA+LH +M++R+   +  CDGFLYG S   E +
Subjt:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.5e-9262.4Show/hide
Query:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD
        RG+N  IR+VWA N   EI   DR L SY+++SIDTEFPG +++TP G++DE+L+ DFRFNVNQTK++QLGVT  +E G IGGTWEFNFS FDPE D  +
Subjt:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD

Query:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK
        P+SI FL+QNGLDF KLK +GI    FA  F   +RK+ I+RWVTFHGLYDIGYLM AMG+++ LPE++  F  +V R VG VRDLK+MARFC+GLE G 
Subjt:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK

Query:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLE
        LGLE++GQLLDQKRFGL+HHAGSDS++TA+LH +M++R+  ++  CDGFLYG S   E
Subjt:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLE

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]3.3e-10063.19Show/hide
Query:  NRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPET
        NR R+     I +VWASNF  EIS  +  L+ +TI+SIDTEFPG +R +P GS+DE L+EDFRFNVNQTKL+QLG+TA ++SGKIGG+WEFNFS FDPE 
Subjt:  NRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPET

Query:  DVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGL
        D Q PSS +FL QNGLDF KLK  GI  ++F A F  I+RK+++FRWVTFHGLYDIGYL+KAMGI + LPE+M  FA +VVR +G+VRDLK+MARFC+GL
Subjt:  DVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGL

Query:  EEGKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSI----PIPYVMPVY
        E+GKLGLER+G+LLDQKR+GL+H+AGSDS+LTA  H EMI+RF +D+  CDG+LYGFSN L+ + ++M M  R I     IPY +P+Y
Subjt:  EEGKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSI----PIPYVMPVY

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease6.1e-9261.23Show/hide
Query:  RQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFD
        R + R  R E   IRQVWASNF +EI+ FD  L+ +TIL+IDTEFPG + ++PRGS+D++L++DF FNVNQTKL+QLG+TA ++ G+IGG+WEFNFS FD
Subjt:  RQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFD

Query:  PETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFC
         E D   P +I FL  NGLD +K+K +GI    F   F  I+RK  IFRWVTFHGLYDIGYL+KAMG+I  LP+SM  FA +VV EVG+VRDLK+MA+FC
Subjt:  PETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFC

Query:  DGLEE-GKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKI
        +GL++ G+LGLER+G+LL+ KRFG++H+AGSDS+LTA  H EM+ERFG++S  C+GFLYGFS  LE + M MKMKI
Subjt:  DGLEE-GKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKI

A0A5A7TRG1 Poly(A)-specific ribonuclease1.4e-9157.38Show/hide
Query:  RQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFD
        R + R RR +   IRQVWASNF +EI+ FD  L+ +TIL+IDTEFPG + ++PR S+DE+++++FRFNVNQ KL+QLG+TA N+ G+IGG+WEFNFS FD
Subjt:  RQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFD

Query:  PETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFC
         + D   PS+I FL +NGLDF+KLK  GI    F   F  I++K  IFRWVTFHGLYDIGYL+KAMG+I  LP+SM  FA LVV EVG+VRDLK+MARFC
Subjt:  PETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFC

Query:  DGLEEGKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPY
        +GLE+G+LGLER+G++L++KRFG++H+AGSDS+LTA  H EM++RFG+    C+GFLYGFS +LE     MKM I           +HN+  +  IP+
Subjt:  DGLEEGKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPY

A0A6J1G7L2 Poly(A)-specific ribonuclease1.7e-8960Show/hide
Query:  RNNRQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFS
        R NR+R R R     +I++VWASNF  EI   +R LQ+  ILSIDTEFPG +R TP GS+DE+++ED RFNVNQTKL+QLG+TA +ESG++ G+WEFNFS
Subjt:  RNNRQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFS

Query:  GFDPETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMA
         FD + D Q+PSSIAFL QNGLDF KLK +GI   +F  +F+RI+R++ + +WVTFHGLYDIGYL+KAMG+ + LPESM  FA +V R VG+VRDLK +A
Subjt:  GFDPETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMA

Query:  RFCDGLEEGKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI
        R+C+GLE+G++GLER+G+LL +KRFG++HHAGSDS+LTA +H +M   F L+S A DG LYG  N L+++
Subjt:  RFCDGLEEGKLGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI

A0A6J1G7T4 Poly(A)-specific ribonuclease3.6e-9262.31Show/hide
Query:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD
        RG+N  IR+VWA N   EI   DR L SY+I+SIDTEFPG +++TP G+ DE+L+ DFRFNVNQTK++QLGVT  +ESG IGGTWEFNFS FDPE D  +
Subjt:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD

Query:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK
        P+SI FL+QNGLDF KLK +GI    FA  F   + K+ I+RWVTFHGLYDIGYLM AMG+++ LPE++  F  +V R VG VRDLK+MARFC+GLE G 
Subjt:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK

Query:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI
        LGLE++GQLLDQKRFGL+HHAGSDS++TA+LH +M++R+   +  CDGFLYG S   E +
Subjt:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHI

A0A6J1I6H7 Poly(A)-specific ribonuclease1.4e-8859.69Show/hide
Query:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD
        RG+N  I +VWA N   EI   D  L  Y ++SIDTEFPG +++TP G++DE+L+ DFRFNVNQTK++QLGVT  +ESG IGGTWEFNFS FDPE D  +
Subjt:  RGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQD

Query:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK
        P+SI FL+QNGLDF KLK +GI    FA  F   +RK+ I +W+TFHGLYDIGYL+ A+G+++ LPE++  F  +V R VG VRDLK+MARFC+GLE G 
Subjt:  PSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGK

Query:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLE
        LGLE++GQLLDQKRFGL+HHAGSDS++TA+LH +M++ +  ++  CDGFLYG S   E
Subjt:  LGLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLE

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 58.1e-4140.43Show/hide
Query:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR
        +VW  N   E++     L+    ++IDTEFPG +++TP  + DE  + D +FNV+ T L+QLG+T F +   I  TWE N S F+    +++  SIAFL+
Subjt:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR

Query:  QNGLDFEKLKSEGISFDVFAASFTRIVRKNH-IFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM
         NGLD +K++ EGI  + F   F++I+ + H   RWVTF G YD  YL+K +   + LPE+   F   V + +G  V D+K MA  C GL   + GL+R+
Subjt:  QNGLDFEKLKSEGISFDVFAASFTRIVRKNH-IFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM

Query:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMI
          +L  +R G  HHAGSDS LTA +  ++I
Subjt:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMI

Q9C6M9 Putative CCR4-associated factor 1 homolog 43.8e-3835.66Show/hide
Query:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR
        +VW  N   E+      L+ ++ ++IDTEFPG +++TP  + +E  + D +FNV+ T L+QLG T F+  G I  TWE N S F+     ++  SIAFL+
Subjt:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR

Query:  QNGLDFEKLKSEGISFDVFAASFTRIVR-KNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM
         NGL+ +K+  EGI  + F   F++I++ K+    WV F G YD  YL+K +   + LPE+   F   V + +G  V D+K +A  C GL   + GL+R+
Subjt:  QNGLDFEKLKSEGISFDVFAASFTRIVR-KNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM

Query:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPYP
          +L  KR G  HHAGSDS LTA +  ++          C   +      LE     + M    IPIP  +P   +V F    P P
Subjt:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPYP

Q9LXM4 Putative CCR4-associated factor 1 homolog 81.7e-4343.32Show/hide
Query:  LQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLRQNGLDFEKLKSEGISFD
        L+SY  ++IDTEFP ++R+T + + DE+ + D  F+V++ KL+QLG+T F+ +G+IGGTWE NFS F  + D ++  SI FLR+NGLD  K++ EGI  +
Subjt:  LQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLRQNGLDFEKLKSEGISFD

Query:  -VFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKLGLERMGQLLDQKRFGLQHHAGSD
          F+  F  + +      WVTFHG YDI YL+K     + LP +   F++ V R +G V DLK MA  C+GL   +LGLE +       R G  HHAGS+
Subjt:  -VFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKLGLERMGQLLDQKRFGLQHHAGSD

Query:  SMLTAMLHREMIERFGL
        + LTAM+  +++  F L
Subjt:  SMLTAMLHREMIERFGL

Q9SFX6 Putative CCR4-associated factor 1 homolog 31.7e-3839.3Show/hide
Query:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR
        +VW  N   E++     L+  + ++IDTEFPG +++TP  + +E  + D +FNV+ T L+QLG T F+  G    TWE N S FD     ++  SIAFL+
Subjt:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR

Query:  QNGLDFEKLKSEGISFDVFAASFTRIV-RKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM
         NGL+ +K++ EGI  D F   F++I+  K+    WV F G YD  YL+K +   + LPE+   F   V + +G  V D+K +A  C GL   + GL+R+
Subjt:  QNGLDFEKLKSEGISFDVFAASFTRIV-RKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM

Query:  GQLLDQKRFGLQHHAGSDSMLTAMLHREM
          +L  KR G  HHAGSDS LTA +  ++
Subjt:  GQLLDQKRFGLQHHAGSDSMLTAMLHREM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.7e-4337.09Show/hide
Query:  RQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFL
        R+VW SN   E++     L+ + +++ DTE+PG + +T   S  ++ +   + NV  TKL+Q G T FN  G+IGG WE NFS F   +D ++  SI FL
Subjt:  RQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFL

Query:  RQNGLDFEKLKSEGISFDVFAASF----TRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQH--LPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKL
        R++GLD +K++ EG+  D+F   F      + R      +VTF G YD  Y    + I+ H  LPE+   FA  VV+  G V D K MA FC+GL E  L
Subjt:  RQNGLDFEKLKSEGISFDVFAASF----TRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQH--LPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKL

Query:  GLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGF-SNNLEHIYMDMKMKIRSIPIPYVM-----PVYHNVTFVQPIPYPSPV
        GL ++ QLL   R G  HHAGSDS++TA++  ++   +  DS    G +YG   +NL        +   ++P+         PV+HN  +VQ    P  V
Subjt:  GLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGF-SNNLEHIYMDMKMKIRSIPIPYVM-----PVYHNVTFVQPIPYPSPV

Query:  SY
        SY
Subjt:  SY

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4437.09Show/hide
Query:  RQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFL
        R+VW SN   E++     L+ + +++ DTE+PG + +T   S  ++ +   + NV  TKL+Q G T FN  G+IGG WE NFS F   +D ++  SI FL
Subjt:  RQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFL

Query:  RQNGLDFEKLKSEGISFDVFAASF----TRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQH--LPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKL
        R++GLD +K++ EG+  D+F   F      + R      +VTF G YD  Y    + I+ H  LPE+   FA  VV+  G V D K MA FC+GL E  L
Subjt:  RQNGLDFEKLKSEGISFDVFAASF----TRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQH--LPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKL

Query:  GLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGF-SNNLEHIYMDMKMKIRSIPIPYVM-----PVYHNVTFVQPIPYPSPV
        GL ++ QLL   R G  HHAGSDS++TA++  ++   +  DS    G +YG   +NL        +   ++P+         PV+HN  +VQ    P  V
Subjt:  GLERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGF-SNNLEHIYMDMKMKIRSIPIPYVM-----PVYHNVTFVQPIPYPSPV

Query:  SY
        SY
Subjt:  SY

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-3939.3Show/hide
Query:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR
        +VW  N   E++     L+  + ++IDTEFPG +++TP  + +E  + D +FNV+ T L+QLG T F+  G    TWE N S FD     ++  SIAFL+
Subjt:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR

Query:  QNGLDFEKLKSEGISFDVFAASFTRIV-RKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM
         NGL+ +K++ EGI  D F   F++I+  K+    WV F G YD  YL+K +   + LPE+   F   V + +G  V D+K +A  C GL   + GL+R+
Subjt:  QNGLDFEKLKSEGISFDVFAASFTRIV-RKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM

Query:  GQLLDQKRFGLQHHAGSDSMLTAMLHREM
          +L  KR G  HHAGSDS LTA +  ++
Subjt:  GQLLDQKRFGLQHHAGSDSMLTAMLHREM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-3935.66Show/hide
Query:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR
        +VW  N   E+      L+ ++ ++IDTEFPG +++TP  + +E  + D +FNV+ T L+QLG T F+  G I  TWE N S F+     ++  SIAFL+
Subjt:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR

Query:  QNGLDFEKLKSEGISFDVFAASFTRIVR-KNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM
         NGL+ +K+  EGI  + F   F++I++ K+    WV F G YD  YL+K +   + LPE+   F   V + +G  V D+K +A  C GL   + GL+R+
Subjt:  QNGLDFEKLKSEGISFDVFAASFTRIVR-KNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM

Query:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPYP
          +L  KR G  HHAGSDS LTA +  ++          C   +      LE     + M    IPIP  +P   +V F    P P
Subjt:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPYP

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.8e-4240.43Show/hide
Query:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR
        +VW  N   E++     L+    ++IDTEFPG +++TP  + DE  + D +FNV+ T L+QLG+T F +   I  TWE N S F+    +++  SIAFL+
Subjt:  QVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLR

Query:  QNGLDFEKLKSEGISFDVFAASFTRIVRKNH-IFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM
         NGLD +K++ EGI  + F   F++I+ + H   RWVTF G YD  YL+K +   + LPE+   F   V + +G  V D+K MA  C GL   + GL+R+
Subjt:  QNGLDFEKLKSEGISFDVFAASFTRIVRKNH-IFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVG-MVRDLKYMARFCDGLEEGKLGLERM

Query:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMI
          +L  +R G  HHAGSDS LTA +  ++I
Subjt:  GQLLDQKRFGLQHHAGSDSMLTAMLHREMI

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4443.32Show/hide
Query:  LQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLRQNGLDFEKLKSEGISFD
        L+SY  ++IDTEFP ++R+T + + DE+ + D  F+V++ KL+QLG+T F+ +G+IGGTWE NFS F  + D ++  SI FLR+NGLD  K++ EGI  +
Subjt:  LQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFDPETDVQDPSSIAFLRQNGLDFEKLKSEGISFD

Query:  -VFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKLGLERMGQLLDQKRFGLQHHAGSD
          F+  F  + +      WVTFHG YDI YL+K     + LP +   F++ V R +G V DLK MA  C+GL   +LGLE +       R G  HHAGS+
Subjt:  -VFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKLGLERMGQLLDQKRFGLQHHAGSD

Query:  SMLTAMLHREMIERFGL
        + LTAM+  +++  F L
Subjt:  SMLTAMLHREMIERFGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAAGTAAGAGATTTAAGAAATAATCGGCAAAGAAATCGATGTCGAAGAGGAGAAAATCACACAATTCGACAAGTTTGGGCTTCAAATTTCGCCACTGAAATCTC
CCACTTTGATCGCCGTCTTCAATCGTATACAATTCTCTCAATCGACACTGAATTTCCCGGCAGCGTTCGGAAAACACCTCGCGGCTCGGTCGACGAACAGCTCTTCGAAG
ATTTTCGATTCAATGTGAACCAAACCAAGCTTCTTCAACTTGGAGTAACGGCATTTAACGAATCAGGAAAAATTGGCGGCACTTGGGAGTTCAACTTCTCCGGTTTCGAC
CCCGAAACCGACGTGCAGGACCCGTCTTCGATTGCGTTCTTGAGACAGAACGGGCTCGATTTCGAAAAGCTGAAGAGCGAGGGAATCTCTTTCGATGTATTCGCTGCAAG
CTTCACTCGCATTGTGAGAAAGAATCATATCTTTAGATGGGTTACGTTCCATGGATTATACGATATCGGATACCTGATGAAGGCAATGGGAATAATCCAACATTTACCTG
AATCAATGGCAGCATTTGCAAGATTGGTCGTTAGAGAAGTGGGAATGGTTAGGGATTTGAAGTACATGGCACGATTCTGCGATGGGCTCGAAGAAGGGAAGCTAGGACTC
GAACGAATGGGGCAACTACTAGACCAAAAACGCTTTGGACTACAACATCATGCTGGCTCTGATAGCATGTTGACCGCGATGCTTCATAGAGAGATGATCGAGCGGTTCGG
TTTGGATTCAATGGCATGTGATGGTTTTTTGTATGGATTTTCCAACAACCTTGAACACATCTACATGGATATGAAAATGAAGATTAGATCTATACCAATTCCATATGTAA
TGCCTGTCTATCATAATGTTACATTTGTACAACCAATTCCATATCCAAGTCCTGTCTCCTATTGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAAGTAAGAGATTTAAGAAATAATCGGCAAAGAAATCGATGTCGAAGAGGAGAAAATCACACAATTCGACAAGTTTGGGCTTCAAATTTCGCCACTGAAATCTC
CCACTTTGATCGCCGTCTTCAATCGTATACAATTCTCTCAATCGACACTGAATTTCCCGGCAGCGTTCGGAAAACACCTCGCGGCTCGGTCGACGAACAGCTCTTCGAAG
ATTTTCGATTCAATGTGAACCAAACCAAGCTTCTTCAACTTGGAGTAACGGCATTTAACGAATCAGGAAAAATTGGCGGCACTTGGGAGTTCAACTTCTCCGGTTTCGAC
CCCGAAACCGACGTGCAGGACCCGTCTTCGATTGCGTTCTTGAGACAGAACGGGCTCGATTTCGAAAAGCTGAAGAGCGAGGGAATCTCTTTCGATGTATTCGCTGCAAG
CTTCACTCGCATTGTGAGAAAGAATCATATCTTTAGATGGGTTACGTTCCATGGATTATACGATATCGGATACCTGATGAAGGCAATGGGAATAATCCAACATTTACCTG
AATCAATGGCAGCATTTGCAAGATTGGTCGTTAGAGAAGTGGGAATGGTTAGGGATTTGAAGTACATGGCACGATTCTGCGATGGGCTCGAAGAAGGGAAGCTAGGACTC
GAACGAATGGGGCAACTACTAGACCAAAAACGCTTTGGACTACAACATCATGCTGGCTCTGATAGCATGTTGACCGCGATGCTTCATAGAGAGATGATCGAGCGGTTCGG
TTTGGATTCAATGGCATGTGATGGTTTTTTGTATGGATTTTCCAACAACCTTGAACACATCTACATGGATATGAAAATGAAGATTAGATCTATACCAATTCCATATGTAA
TGCCTGTCTATCATAATGTTACATTTGTACAACCAATTCCATATCCAAGTCCTGTCTCCTATTGCTTTTGA
Protein sequenceShow/hide protein sequence
MQKVRDLRNNRQRNRCRRGENHTIRQVWASNFATEISHFDRRLQSYTILSIDTEFPGSVRKTPRGSVDEQLFEDFRFNVNQTKLLQLGVTAFNESGKIGGTWEFNFSGFD
PETDVQDPSSIAFLRQNGLDFEKLKSEGISFDVFAASFTRIVRKNHIFRWVTFHGLYDIGYLMKAMGIIQHLPESMAAFARLVVREVGMVRDLKYMARFCDGLEEGKLGL
ERMGQLLDQKRFGLQHHAGSDSMLTAMLHREMIERFGLDSMACDGFLYGFSNNLEHIYMDMKMKIRSIPIPYVMPVYHNVTFVQPIPYPSPVSYCF