; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018883 (gene) of Chayote v1 genome

Gene IDSed0018883
OrganismSechium edule (Chayote v1)
DescriptionMitochondrial ribosomal protein L37
Genome locationLG08:29206683..29207085
RNA-Seq ExpressionSed0018883
SyntenySed0018883
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022683.1 hypothetical protein SDJN02_16417 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3567.91Show/hide
Query:  MVVSQIRLFRRSLVNSK-DLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQ
        M +SQIRL RRSL+NSK DLI+LTN     + G            DAPKASIL+KEVKST VVG NILKEGADPK MADSEY DWL RLIDK  ALSEL+
Subjt:  MVVSQIRLFRRSLVNSK-DLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQ

Query:  RKNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        RK+ +TLPY+DLKRFVKLD R RI ENNS K KN
Subjt:  RKNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

XP_022928329.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata]3.4e-3768.42Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR
        M +SQIRL RRSL+N+KDLI+LTN     + G            DAPKASIL+KEVKST VVG NILKEGADPK MADSEY DWL RLIDK  ALSELQR
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR

Query:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        K+ +TLPY+DLKRFVKLD R RI ENNS K KN
Subjt:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]1.2e-3768.94Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRK
        M +SQIRLFRRSL+N+KDLI+LTN     + G           DAPKASIL+KEVKST VVG NILKEGADPK MADSEY DWL RLIDK  ALSEL+RK
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRK

Query:  NVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        + +TLPY+DLKRFVKLD R RI ENNS K KN
Subjt:  NVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]5.9e-3768.42Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR
        MV+SQIRLFRRS+VNSKDLI+LT+     + G           ADAPKAS L+KEVKST VVG NILKEGADPK MADSEY  WL  L+DKH  LSEL+R
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR

Query:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        KNVETLPY DLKRFVKLD R +I ENNS K KN
Subjt:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]5.9e-3768.42Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR
        MV+SQIRLFRRS+VNSKDLI+LT+     + G           ADAPKAS L+KEVKST VVG NILKEGADPK MADSEY  WL  L+DKH  LSEL+R
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR

Query:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        KNVETLPY DLKRFVKLD R +I ENNS K KN
Subjt:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

TrEMBL top hitse value%identityAlignment
A0A2I4DPL9 uncharacterized protein LOC108982239 isoform X11.1e-3366.67Show/hide
Query:  RSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNVETLPYDD
        R ++ SK+ I +T C   +SAG           +DAPKASIL+KEVKST VVG NILK+GADPK +ADSEY DWLR LIDK  ALSEL+RKN+ETLPY+D
Subjt:  RSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNVETLPYDD

Query:  LKRFVKLDNRTRIMENNSIKEKN
        LKRFVKLDNR RI ENNSIK KN
Subjt:  LKRFVKLDNRTRIMENNSIKEKN

A0A5D3CXE8 39S ribosomal protein L541.1e-3364.66Show/hide
Query:  MVVSQIRLFRRS-LVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQ
        M +SQIR FRR+ +V+SKDLI+LT+  +  + G           ADAPKASIL+KEVKST VVG NILKEGADPK MADSEY  WL  L+DKH  LSEL+
Subjt:  MVVSQIRLFRRS-LVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQ

Query:  RKNVETLPYDDLKRFVKLDNRTRIMENNSIKEK
        RKN E+LPY DL+RFVKLD R RI ENNSIK K
Subjt:  RKNVETLPYDDLKRFVKLDNRTRIMENNSIKEK

A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like7.0e-3666.67Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRK
        M +SQ RLF RS++N+KD I++T+     + G          AD PKASIL+KEVKS+ VVG NILKEGADPK MADSEY DWL RLIDKH ALSEL+RK
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRK

Query:  NVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        NVE LPY+DLKRFVKLDNR  I ENNSIK KN
Subjt:  NVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

A0A6J1EKI4 54S ribosomal protein L37, mitochondrial-like1.7e-3768.42Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR
        M +SQIRL RRSL+N+KDLI+LTN     + G            DAPKASIL+KEVKST VVG NILKEGADPK MADSEY DWL RLIDK  ALSELQR
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG-----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQR

Query:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        K+ +TLPY+DLKRFVKLD R RI ENNS K KN
Subjt:  KNVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like5.7e-3868.94Show/hide
Query:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRK
        M +SQIRLFRRSL+N+KDLI+LTN     + G           DAPKASIL+KEVKST VVG NILKEGADPK MADSEY DWL RLIDK  ALSEL+RK
Subjt:  MVVSQIRLFRRSLVNSKDLIELTNCANIWSAG----------ADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRK

Query:  NVETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        + +TLPY+DLKRFVKLD R RI ENNS K KN
Subjt:  NVETLPYDDLKRFVKLDNRTRIMENNSIKEKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L373.9e-3157.81Show/hide
Query:  VSQIRLFRRSLVNSKDLIELTNCANIWSA--------GADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNVET
        +++I L R S  +SKD++  T  A    A         +DAPK S L KE+KST VVG N LK+G+DPK + DS+Y DWL  L+DK  ALSEL+RKNVET
Subjt:  VSQIRLFRRSLVNSKDLIELTNCANIWSA--------GADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNVET

Query:  LPYDDLKRFVKLDNRTRIMENNSIKEKN
        LPYDDLKRFVKLD R +I ENNSIK KN
Subjt:  LPYDDLKRFVKLDNRTRIMENNSIKEKN

AT5G14290.1 Mitochondrial ribosomal protein L371.0e-2651.54Show/hide
Query:  IRLFRRSLVNSKDLIELTNCANIWS-------------AGADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNV
        IR+F  S+  SKD++    C   ++              G DAPKAS L+KE+KS+ VV  N LK+G DPK + +S++ D+L  L+DK  ALSEL+RKNV
Subjt:  IRLFRRSLVNSKDLIELTNCANIWS-------------AGADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNV

Query:  ETLPYDDLKRFVKLDNRTRIMENNSIKEKN
        ETL +DDLKRFVKLD R RI EN+SIK KN
Subjt:  ETLPYDDLKRFVKLDNRTRIMENNSIKEKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTGAGCCAAATTAGATTGTTTAGAAGAAGCCTCGTCAATTCTAAAGATCTAATAGAATTGACAAACTGTGCGAACATTTGGAGTGCGGGTGCTGATGCTCCTAA
AGCATCAATTCTAAATAAAGAGGTCAAGTCTACTAATGTAGTTGGTGTCAATATTCTCAAGGAAGGTGCAGATCCAAAAACCATGGCTGATTCCGAGTACCTTGATTGGC
TGCGGCGTTTAATCGATAAACATCAAGCTTTAAGTGAATTACAAAGGAAGAATGTCGAAACTCTTCCCTACGACGATCTCAAACGCTTTGTTAAATTGGATAATCGGACA
AGGATTATGGAAAACAACTCTATTAAGGAAAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTGAGCCAAATTAGATTGTTTAGAAGAAGCCTCGTCAATTCTAAAGATCTAATAGAATTGACAAACTGTGCGAACATTTGGAGTGCGGGTGCTGATGCTCCTAA
AGCATCAATTCTAAATAAAGAGGTCAAGTCTACTAATGTAGTTGGTGTCAATATTCTCAAGGAAGGTGCAGATCCAAAAACCATGGCTGATTCCGAGTACCTTGATTGGC
TGCGGCGTTTAATCGATAAACATCAAGCTTTAAGTGAATTACAAAGGAAGAATGTCGAAACTCTTCCCTACGACGATCTCAAACGCTTTGTTAAATTGGATAATCGGACA
AGGATTATGGAAAACAACTCTATTAAGGAAAAGAATTGA
Protein sequenceShow/hide protein sequence
MVVSQIRLFRRSLVNSKDLIELTNCANIWSAGADAPKASILNKEVKSTNVVGVNILKEGADPKTMADSEYLDWLRRLIDKHQALSELQRKNVETLPYDDLKRFVKLDNRT
RIMENNSIKEKN