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Sed0018890 (gene) of Chayote v1 genome

Gene IDSed0018890
OrganismSechium edule (Chayote v1)
DescriptionBRCT domain-containing protein
Genome locationLG13:2837580..2850010
RNA-Seq ExpressionSed0018890
SyntenySed0018890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOX94920.1 Uncharacterized protein TCM_004519 [Theobroma cacao]1.0e-0568.42Show/hide
Query:  NSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIF
        +++E   G+WSSGMILALGARGPEF+SRNAP F F +F
Subjt:  NSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIF

KAF8083918.1 hypothetical protein N665_0746s0020 [Sinapis alba]6.5e-0581.25Show/hide
Query:  NSYEGHLGIWSSGMILALGARGPEFNSRNAPS
        N     LGIWSSGMILALGARGPEF+SRNAPS
Subjt:  NSYEGHLGIWSSGMILALGARGPEFNSRNAPS

KAF9665928.1 hypothetical protein SADUNF_Sadunf16G0175700 [Salix dunnii]3.8e-0562.22Show/hide
Query:  SYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIFNFKLQNSI
        S+E  +GIWSSGMILALGARGPEF+SRNAP      F     N+I
Subjt:  SYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIFNFKLQNSI

KAF9675796.1 hypothetical protein SADUNF_Sadunf09G0070100 [Salix dunnii]1.1e-0489.29Show/hide
Query:  HLGIWSSGMILALGARGPEFNSRNAPSF
        +LGIWSSGMILALGARGPEF+SRNAP F
Subjt:  HLGIWSSGMILALGARGPEFNSRNAPSF

KAG6762591.1 hypothetical protein POTOM_033102 [Populus tomentosa]3.8e-0565.31Show/hide
Query:  TECNIEGQNSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPF-IIFNF
        T+C+    N Y   LGIWSSGMILALGARGPEF+SRNAP F   I+F F
Subjt:  TECNIEGQNSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPF-IIFNF

TrEMBL top hitse value%identityAlignment
A0A061DQC8 Uncharacterized protein4.9e-0668.42Show/hide
Query:  NSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIF
        +++E   G+WSSGMILALGARGPEF+SRNAP F F +F
Subjt:  NSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIF

A0A2C9VIU6 Uncharacterized protein (Fragment)7.0e-0578.12Show/hide
Query:  LGIWSSGMILALGARGPEFNSRNAPSFPFIIF
        +GIWSSGMILALGARGPEF+SRNAP+  F  F
Subjt:  LGIWSSGMILALGARGPEFNSRNAPSFPFIIF

A0A3P6B491 Uncharacterized protein9.1e-0580.65Show/hide
Query:  NSYEGHLGIWSSGMILALGARGPEFNSRNAP
        N  +  LGIWSSGMILALGARGPEF+SRNAP
Subjt:  NSYEGHLGIWSSGMILALGARGPEFNSRNAP

A0A3P6BFV3 Uncharacterized protein2.0e-0475.76Show/hide
Query:  GHLGIWSSGMILALGARGPEFNSRNAPSFPFII
        G +GIWSSGMILALGARGPEF+SRNAP   F++
Subjt:  GHLGIWSSGMILALGARGPEFNSRNAPSFPFII

A0A6N2LY30 Uncharacterized protein1.2e-0489.29Show/hide
Query:  GIWSSGMILALGARGPEFNSRNAPSFPF
        GIWSSGMILALGARGPEF+SRNAP F F
Subjt:  GIWSSGMILALGARGPEFNSRNAPSFPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACGGAATGTAACATAGAAGGACAAAATTCATATGAAGGACATTTAGGCATTTGGTCTAGTGGTATGATTCTTGCTTTGGGTGCGAGAGGTCCCGAGTTCAATTC
TCGGAATGCCCCAAGTTTTCCATTTATCATTTTCAACTTTAAACTTCAAAATTCCATATTTTTTTATACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACGGAATGTAACATAGAAGGACAAAATTCATATGAAGGACATTTAGGCATTTGGTCTAGTGGTATGATTCTTGCTTTGGGTGCGAGAGGTCCCGAGTTCAATTC
TCGGAATGCCCCAAGTTTTCCATTTATCATTTTCAACTTTAAACTTCAAAATTCCATATTTTTTTATACATAA
Protein sequenceShow/hide protein sequence
MTTECNIEGQNSYEGHLGIWSSGMILALGARGPEFNSRNAPSFPFIIFNFKLQNSIFFYT