; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0018891 (gene) of Chayote v1 genome

Gene IDSed0018891
OrganismSechium edule (Chayote v1)
DescriptionCtenidin-3-like
Genome locationLG14:22841435..22842100
RNA-Seq ExpressionSed0018891
SyntenySed0018891
Gene Ontology termsGO:0007218 - neuropeptide signaling pathway (biological process)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13106.1 ctenidin-3-like [Cucumis melo var. makuwa]2.8e-4475.59Show/hide
Query:  VSTFLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSS
        V  FLIAIL+LSPS S         F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR  +VCKEKGPC+NKKVTCPAKCFSS S
Subjt:  VSTFLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSS

Query:  RSGKGFGGGGGGGGCSIDCTKKCIGYC
        RSGKG+GGGGGGGGC+IDC KKCIGYC
Subjt:  RSGKGFGGGGGGGGCSIDCTKKCIGYC

XP_022926656.1 neuropeptide-like protein 31 [Cucurbita moschata]3.6e-4775.57Show/hide
Query:  MAVSTFLIAILILSPSFS-----------FAGMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCF
        MA+ST L+A+L+LSP+FS           F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR ++VCKEKGPCYNKKVTCPAKCF
Subjt:  MAVSTFLIAILILSPSFS-----------FAGMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCF

Query:  SSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC
        SS SRSGKGFGGGGGGGGC+IDCTKKCIGYC
Subjt:  SSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC

XP_023003427.1 eggshell protein-like [Cucurbita maxima]5.2e-4675.38Show/hide
Query:  MAVSTFLIAILILSPSFSFA----------GMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFS
        MA+ST L+ + +LSP+FSFA          GMF+P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR ++VCKEKGPCYNKKVTCPAKCFS
Subjt:  MAVSTFLIAILILSPSFSFA----------GMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFS

Query:  SSSRSGKGFGGGGGGGGCSIDCTKKCIGYC
        S SRSGKGFGGGGGGGGC+IDCTKKCIGYC
Subjt:  SSSRSGKGFGGGGGGGGCSIDCTKKCIGYC

XP_023517828.1 cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]2.3e-4674.81Show/hide
Query:  MAVSTFLIAILILSPSFS-----------FAGMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCF
        MA+S  L+A+L+LSP FS           F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR ++VCKEKGPCYNKKVTCPAKCF
Subjt:  MAVSTFLIAILILSPSFS-----------FAGMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCF

Query:  SSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC
        SS SRSGKGFGGGGGGGGC+IDCTKKCIGYC
Subjt:  SSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC

XP_023543509.1 ATP-dependent RNA helicase A [Cucurbita pepo subsp. pepo]2.2e-4476.86Show/hide
Query:  MAVSTFLIAILILSPSFSF-AGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGF
        + +S  L+A+L+LSPS S  AGMF+P  GFD +P + KGWDKG  GGGYGGGYG PKGGYGKGGIIR ++VCKEKGPCYNKKVTCPAKCFSS SRSGKGF
Subjt:  MAVSTFLIAILILSPSFSF-AGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGF

Query:  GGGGGGGGCSIDCTKKCIGYC
        GGGGGGGGC+IDC+KKCIGYC
Subjt:  GGGGGGGGCSIDCTKKCIGYC

TrEMBL top hitse value%identityAlignment
A0A1S3AZW7 ctenidin-3-like1.8e-4476.61Show/hide
Query:  FLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSG
        FLIAIL+LSPS S         F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR  +VCKEKGPC+NKKVTCPAKCFSS SRSG
Subjt:  FLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSG

Query:  KGFGGGGGGGGCSIDCTKKCIGYC
        KG+GGGGGGGGC+IDC KKCIGYC
Subjt:  KGFGGGGGGGGCSIDCTKKCIGYC

A0A5A7UGS4 Ctenidin-3-like1.8e-4476.61Show/hide
Query:  FLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSG
        FLIAIL+LSPS S         F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR  +VCKEKGPC+NKKVTCPAKCFSS SRSG
Subjt:  FLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSG

Query:  KGFGGGGGGGGCSIDCTKKCIGYC
        KG+GGGGGGGGC+IDC KKCIGYC
Subjt:  KGFGGGGGGGGCSIDCTKKCIGYC

A0A5D3CRS6 Ctenidin-3-like1.4e-4475.59Show/hide
Query:  VSTFLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSS
        V  FLIAIL+LSPS S         F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR  +VCKEKGPC+NKKVTCPAKCFSS S
Subjt:  VSTFLIAILILSPSFS---------FAGMFDPDNGFDGVPNYGKGWDKGF-GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSS

Query:  RSGKGFGGGGGGGGCSIDCTKKCIGYC
        RSGKG+GGGGGGGGC+IDC KKCIGYC
Subjt:  RSGKGFGGGGGGGGCSIDCTKKCIGYC

A0A6J1EFI3 neuropeptide-like protein 311.7e-4775.57Show/hide
Query:  MAVSTFLIAILILSPSFS-----------FAGMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCF
        MA+ST L+A+L+LSP+FS           F GMF P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR ++VCKEKGPCYNKKVTCPAKCF
Subjt:  MAVSTFLIAILILSPSFS-----------FAGMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCF

Query:  SSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC
        SS SRSGKGFGGGGGGGGC+IDCTKKCIGYC
Subjt:  SSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC

A0A6J1KMH9 eggshell protein-like2.5e-4675.38Show/hide
Query:  MAVSTFLIAILILSPSFSFA----------GMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFS
        MA+ST L+ + +LSP+FSFA          GMF+P NGFD +P +GKGWDKG  GGGYGGGYG PKGGYGKGGIIR ++VCKEKGPCYNKKVTCPAKCFS
Subjt:  MAVSTFLIAILILSPSFSFA----------GMFDPDNGFDGVPNYGKGWDKG-FGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFS

Query:  SSSRSGKGFGGGGGGGGCSIDCTKKCIGYC
        S SRSGKGFGGGGGGGGC+IDCTKKCIGYC
Subjt:  SSSRSGKGFGGGGGGGGCSIDCTKKCIGYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)9.8e-1951.49Show/hide
Query:  NYGKGWDKGF---------------GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGFGGGGGGGGCSIDCTKKCIGY
        NY KG+  G                G G GG Y +  GGY KG  +R +++C+EKG CY KK+TCPAKCF S SR GKG+  GGGGGGC+IDC KKC+ Y
Subjt:  NYGKGWDKGF---------------GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGFGGGGGGGGCSIDCTKKCIGY

Query:  C
        C
Subjt:  C

AT4G21620.1 glycine-rich protein3.2e-3054.84Show/hide
Query:  VSTFLIAILILSPSFSFAGMFDPDNGFDGVPNYG--KGWDKGF-----GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSG
        +++ LI IL+ +   +     +   GF GVP  G   G+  GF     GGGYGGG+G P GG+GKGG++R ++ CKEKGPC  KK+ CPAKCF S SRSG
Subjt:  VSTFLIAILILSPSFSFAGMFDPDNGFDGVPNYG--KGWDKGF-----GGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSG

Query:  KGFGGGGGGGGCSIDCTKKCIGYC
        KG+GGGGGGGGC++DC KKCI YC
Subjt:  KGFGGGGGGGGCSIDCTKKCIGYC

AT4G21620.2 glycine-rich protein5.9e-2471.88Show/hide
Query:  GGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC
        GG+GKGG++R ++ CKEKGPC  KK+ CPAKCF S SRSGKG+GGGGGGGGC++DC KKCI YC
Subjt:  GGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGFGGGGGGGGCSIDCTKKCIGYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTCCACTTTTCTCATAGCCATTCTCATTCTCTCGCCCTCCTTCTCCTTTGCCGGCATGTTCGACCCCGATAACGGGTTCGACGGCGTACCCAACTACGGAAA
GGGCTGGGACAAAGGCTTTGGTGGGGGATACGGTGGTGGCTACGGCGACCCGAAAGGCGGCTACGGGAAGGGCGGGATCATAAGGACCAGTTTGGTGTGTAAAGAGAAGG
GTCCTTGTTACAACAAGAAAGTGACTTGTCCAGCTAAGTGCTTCTCTTCCTCTAGCCGATCAGGAAAAGGGTTCGGTGGCGGCGGTGGCGGGGGCGGCTGCTCCATTGAC
TGTACTAAGAAATGTATCGGCTACTGTTAG
mRNA sequenceShow/hide mRNA sequence
CATCTTTATAACCACTTCTTTCACTTTCCCAGTCCACAAACAAAAATGGCTGTTTCCACTTTTCTCATAGCCATTCTCATTCTCTCGCCCTCCTTCTCCTTTGCCGGCAT
GTTCGACCCCGATAACGGGTTCGACGGCGTACCCAACTACGGAAAGGGCTGGGACAAAGGCTTTGGTGGGGGATACGGTGGTGGCTACGGCGACCCGAAAGGCGGCTACG
GGAAGGGCGGGATCATAAGGACCAGTTTGGTGTGTAAAGAGAAGGGTCCTTGTTACAACAAGAAAGTGACTTGTCCAGCTAAGTGCTTCTCTTCCTCTAGCCGATCAGGA
AAAGGGTTCGGTGGCGGCGGTGGCGGGGGCGGCTGCTCCATTGACTGTACTAAGAAATGTATCGGCTACTGTTAGAGGTCGCTGGTAGTATCTATAATGCTGCAGGTTTA
CTAGACTCATATATGAAGTATTGTAATATAATTATAAGTGATGTTGTGTAATGTTGTTGTATGTGTTTATTTTTTTGTTAATTTTCAAATTATGGTTTTTCTCCAACTCT
TTGGAATTGGGGGTTTCTAATTATGAATATGCTGTGAGAACTTTAATAATTCTGTGTTAAATTGGTTGGGAATGTTGCTTGGTTTTGAATTTTGATACAACTAATTATCA
TTGAGG
Protein sequenceShow/hide protein sequence
MAVSTFLIAILILSPSFSFAGMFDPDNGFDGVPNYGKGWDKGFGGGYGGGYGDPKGGYGKGGIIRTSLVCKEKGPCYNKKVTCPAKCFSSSSRSGKGFGGGGGGGGCSID
CTKKCIGYC