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Sed0018902 (gene) of Chayote v1 genome

Gene IDSed0018902
OrganismSechium edule (Chayote v1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Genome locationLG11:17116890..17138660
RNA-Seq ExpressionSed0018902
SyntenySed0018902
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR000297 - Peptidyl-prolyl cis-trans isomerase, PpiC-type
IPR043323 - Peptidyl-prolyl cis-trans isomerase PIN4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8021441.1 hypothetical protein BT93_G1775 [Corymbia citriodora subsp. variegata]2.9e-3865.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK+KDAG KGKGK K  GG  G+D++GSKGKGK GK  SDGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQ+VAFSTPV ATSAPFKSTHGYHIILSEGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

XP_008465730.1 PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucumis melo]1.0e-3865.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK KDAG KGKGKAK   GG+GADES SKGKGK GK A+DGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQ+VAF+T V ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

XP_022156307.1 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 isoform X3 [Momordica charantia]1.7e-3865.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK KDAG KGKGKAK     AGADES SKGKGK GK A+DGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAFST + ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

XP_022946573.1 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucurbita moschata]6.5e-3864.9Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK+KDAG KGKGK K     +GADES SKGKGK GK ASDGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAFST + ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

XP_022999389.1 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Cucurbita maxima]2.2e-3865.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK+KDAG KGKGKAK     +GADES SKGKGK GK ASDGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAFST + ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

TrEMBL top hitse value%identityAlignment
A0A1S3CPJ7 Peptidyl-prolyl cis-trans isomerase4.8e-3965.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK KDAG KGKGKAK   GG+GADES SKGKGK GK A+DGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQ+VAF+T V ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

A0A5C7H413 Peptidyl-prolyl cis-trans isomerase4.1e-3864.9Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSKSKDAG KGKGK   GGG    DE+ SKGKGKGGK A+DGLGTCTYV                                     K+AAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQ+VAF+TPV ATSAPFKSTHGYHIILSEGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

A0A6J1DRP8 Peptidyl-prolyl cis-trans isomerase8.3e-3965.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK KDAG KGKGKAK     AGADES SKGKGK GK A+DGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAFST + ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

A0A6J1G492 Peptidyl-prolyl cis-trans isomerase3.1e-3864.9Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK+KDAG KGKGK K     +GADES SKGKGK GK ASDGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAFST + ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

A0A6J1KGY7 Peptidyl-prolyl cis-trans isomerase1.1e-3865.56Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKDSK+KDAG KGKGKAK     +GADES SKGKGK GK ASDGLGTCTYV                                     KLAAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAFST + ATSAPFKSTHGYHIIL EGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

SwissProt top hitse value%identityAlignment
A6QPY8 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 43.9e-0936.43Show/hide
Query:  KGKAKPGGGGAGADESGSKG---KGKGGKGASDGL---------------------GTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTP
        KGK+  G GG G   SGS+    K +G KG  + +                         + ++AA+YSE    ++GGDLGW  RG M GPFQ+ AF+ P
Subjt:  KGKAKPGGGGAGADESGSKG---KGKGGKGASDGL---------------------GTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTP

Query:  VAA------TSAPFKSTHGYHIILSEGRK
        ++       T  P K+  GYHII+ EGRK
Subjt:  VAA------TSAPFKSTHGYHIILSEGRK

B5KFL3 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 42.0e-1039.84Show/hide
Query:  KGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGT----C-----------------TYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPV
        KGKG  K G GG G   S S+GK +G KG    +      C                  + ++AA+YSE    ++GGDLGW  RG M GPFQ+ AF+ PV
Subjt:  KGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGT----C-----------------TYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPV

Query:  AA------TSAPFKSTHGYHIILSEGRK
        ++      T  P K+  GYHII+ EGRK
Subjt:  AA------TSAPFKSTHGYHIILSEGRK

Q503Y7 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 49.5e-0837.3Show/hide
Query:  KDAGSKG-KGKAKPGGGGAGADESGSKG-------------KGKGGKGASDGLGTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVAA
        K  G KG KG A  G G +   E   KG              GK  +          + ++AA+YSE    ++GGDLGW  RG M GPFQD AF+ P++ 
Subjt:  KDAGSKG-KGKAKPGGGGAGADESGSKG-------------KGKGGKGASDGLGTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVAA

Query:  ------TSAPFKSTHGYHIILSEGRK
              T  P K+  GYHII+ EG+K
Subjt:  ------TSAPFKSTHGYHIILSEGRK

Q9CWW6 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 43.9e-0936.72Show/hide
Query:  GSKGKGKAKPGGGGAGADESGSKGKGKGGKG------------------ASDGLGT-CTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPV
        G  G GK   GG  +G+D +  K +G  G G                  A + L +   + ++A +YSE    ++GGDLGW  RG M GPFQ+ AF+ PV
Subjt:  GSKGKGKAKPGGGGAGADESGSKGKGKGGKG------------------ASDGLGT-CTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPV

Query:  AA------TSAPFKSTHGYHIILSEGRK
        +       T  P K+  GYHII+ EGRK
Subjt:  AA------TSAPFKSTHGYHIILSEGRK

Q9Y237 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 45.9e-1038.28Show/hide
Query:  GSKGKGKAKPGGGGAGADESGSKGKGKGGKG------------------ASDGLGT-CTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPV
        G  G GKA  GG  +G+D +  K +G  G G                  A + L +   + ++AA+YSE    ++GGDLGW  RG M GPFQ+ AF+ PV
Subjt:  GSKGKGKAKPGGGGAGADESGSKGKGKGGKG------------------ASDGLGT-CTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPV

Query:  AA------TSAPFKSTHGYHIILSEGRK
        +       T  P K+  GYHII+ EGRK
Subjt:  AA------TSAPFKSTHGYHIILSEGRK

Arabidopsis top hitse value%identityAlignment
AT1G26550.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein2.9e-3659.6Show/hide
Query:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS
        MGKD+K   AG KGKGK       +G++E+ SKGKGK GK A+DGLGTCTYV                                     K+AAEYSECPS
Subjt:  MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYV-------------------------------------KLAAEYSECPS

Query:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN
        GKKGGDLGWFPRGKMAGPFQDVAF+TPV  TSAPFKSTHGYHIILSEGRKN
Subjt:  GKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSEGRKN

AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 11.4e-0637.7Show/hide
Query:  GTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHII
        G   + ++A   S+C S K+GGDLG F RG+M  PF++  ++  V   S    +  G HII
Subjt:  GTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHII

AT5G19370.1 rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein7.7e-0558.82Show/hide
Query:  LAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAF
        LAAEYS CPS K GG LGW   G+M   F++ AF
Subjt:  LAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAAGACTCGAAGTCAAAGGACGCGGGTAGCAAAGGGAAGGGGAAGGCGAAGCCAGGCGGCGGCGGCGCCGGGGCTGATGAAAGCGGTTCGAAAGGGAAAGGAAA
GGGCGGAAAAGGTGCTTCCGATGGGCTCGGCACTTGCACTTACGTTAAATTAGCTGCTGAGTACTCAGAGTGTCCATCGGGGAAGAAAGGTGGGGACCTTGGATGGTTCC
CTCGTGGAAAGATGGCTGGCCCATTTCAGGATGTTGCATTCAGCACTCCGGTTGCAGCGACCAGTGCTCCTTTCAAGTCAACGCATGGGTACCATATTATCTTGTCTGAA
GGAAGAAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAAGACTCGAAGTCAAAGGACGCGGGTAGCAAAGGGAAGGGGAAGGCGAAGCCAGGCGGCGGCGGCGCCGGGGCTGATGAAAGCGGTTCGAAAGGGAAAGGAAA
GGGCGGAAAAGGTGCTTCCGATGGGCTCGGCACTTGCACTTACGTTAAATTAGCTGCTGAGTACTCAGAGTGTCCATCGGGGAAGAAAGGTGGGGACCTTGGATGGTTCC
CTCGTGGAAAGATGGCTGGCCCATTTCAGGATGTTGCATTCAGCACTCCGGTTGCAGCGACCAGTGCTCCTTTCAAGTCAACGCATGGGTACCATATTATCTTGTCTGAA
GGAAGAAAGAATTAG
Protein sequenceShow/hide protein sequence
MGKDSKSKDAGSKGKGKAKPGGGGAGADESGSKGKGKGGKGASDGLGTCTYVKLAAEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPVAATSAPFKSTHGYHIILSE
GRKN