CuGenDBv2

Gene ID	Sed0018904
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor LEP-like
Genome location	LG02:46917840..46918310
RNA-Seq Expression	Sed0018904
Synteny	Sed0018904
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581971.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia]

7.0e-59

78.12

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE
        MRGSKARTNFVYSDMPHGSSVT+I+SPDDSQLFP  P PTPTSL QTQPNHL F L  DPFT + FPGNDWLPD D     SYQPVTAFMDTGIPH D+E
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE

Query:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        LPPLPPDASSSY+D ATM DWS +SSSSS+ G+DSNA  PPFPDT +D FGFGSSS YFY
Subjt:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

KAG7018390.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.5e-58

77.5

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE
        MRGSKARTNFVYSDMPHGSSVT+I+SPDDSQLFP  P PTPTSL QTQPNHL F L  DPFT + FPGNDWLPD D     SYQPVTAFM+TGIPH D+E
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE

Query:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        LPPLPPDASSSY+D ATM DWS +SSSSS+ G+DSNA  PPFPD  +DAFGFGSSS YFY
Subjt:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

XP_022980062.1 ethylene-responsive transcription factor LEP-like [Cucurbita maxima]

9.1e-59

78.12

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE
        MRGSKARTNFVYSDMPHGSSVT+I+SPDDSQLFP  P PTPTSL QTQPNHL F L  DPFT + FPGNDWLPD+D     SYQPVTAFMDTGIPH D+E
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE

Query:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        LPPLPPDASSSY D ATM DWS +SSSSS+ G+DSNA  PPFPDT +D+FGFGSSS YFY
Subjt:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

XP_023528971.1 ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]

2.7e-58

77.5

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE
        MRGSKARTNFVYSDMPHGSSVT+I+SPDDSQLFP  P PTPTSL QTQPNHL F L  DPFT + FPGNDWLPD D     SYQPVTAFMDTGIPH ++E
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE

Query:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        LPPLPPDASSSY+D ATM DWS +SSSSS+ G+DSN   PPFPDT +DAFGFGSSS YFY
Subjt:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

XP_038877958.1 ethylene-responsive transcription factor LEP-like [Benincasa hispida]

2.4e-59

78.26

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQ-TQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSEL
        MRGSKARTNFVYSDMPHGSSVTSI+SPD+SQL+PP PTPTSL+  +QPNHL F L  DPF+TS FPGNDWLPD     T+SYQPVTAFMDTGIPHDD+EL
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQ-TQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSEL

Query:  PPLPPDASSSYHDSATMFDWSTA--SSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        PPLPPDASSSY+D ATM DWSTA  SSSSS+  +DSNA  PPFPDT +DAFGFGSSS YFY
Subjt:  PPLPPDASSSYHDSATMFDWSTA--SSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYM7 AP2/ERF domain-containing protein

8.1e-53

74.84

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELPPL
        MRGSKARTNFVYSDMPHGSSVTSI+SPD+SQL+PP P       TQPNHL F  DPFTTS FPGNDWLPD+D     SYQPVTAFMD GI +DD+ELPPL
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELPPL

Query:  PPDASSSYHDSATMFDWSTASSS--SSYTGYDSNAAFPPFPDTG-SDAFGFGSSSTYFY
        PPDASSSY+D A M DWSTASSS  SS+ G++SNA FP FPDT  SD FGFGSSSTYFY
Subjt:  PPDASSSYHDSATMFDWSTASSS--SSYTGYDSNAAFPPFPDTG-SDAFGFGSSSTYFY

A0A1S3BXG1 ethylene-responsive transcription factor LEP-like

3.0e-55

76.58

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELPPL
        MRGSKARTNFVYSDMPHGSSVTSI+SPD+SQL+PP PT      +QPNHL F  DPFTTS FPGNDWLPD+D     SYQPVTAFMD GI HDD+ELPPL
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELPPL

Query:  PPDASSSYHD-SATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSD-AFGFGSSSTYFY
        PPDASSSY+D +A M DWSTASSSSS+ G++SNA FPPFPDT SD +FGFGSSSTYFY
Subjt:  PPDASSSYHD-SATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSD-AFGFGSSSTYFY

A0A6J1DVR8 ethylene-responsive transcription factor LEP-like

8.7e-39

62.5

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDS--QLFPPIPTPTSLSQTQPNHLGFNL-DPFTTSPFPGNDWLPDADFSS----TSSYQPVTAFMDTGIPHD
        MRGSKARTNFVYSDMPHGSS+TSI+SPD+S     PPIPTP     TQ + L F L DPF TSPFPGN+WL ++DF       S+YQPVTAFMDTG+P  
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDS--QLFPPIPTPTSLSQTQPNHLGFNL-DPFTTSPFPGNDWLPDADFSS----TSSYQPVTAFMDTGIPHD

Query:  DS-ELPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAA-FPPFPDTGSDAFGF---GSSSTYFY
        DS ELPPLPPDASSSY++ A M              YDSNAA  PPFPDT +D +GF   GSSSTYFY
Subjt:  DS-ELPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAA-FPPFPDTGSDAFGF---GSSSTYFY

A0A6J1GVK2 ethylene-responsive transcription factor LEP-like

1.1e-57

76.88

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLS--QTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE
        MRGSKARTNFVYSDMPHGSSVT+I+SPDDSQLFPP PTPT  S  QTQPNHL F L  DPFT + FPGNDWLPD D     SYQPVTAFMDTGIPH D+E
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLS--QTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE

Query:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        LPPLPPDASSSY+D ATM DWS +SSSSS+ G+DSNA  PPFPD  +DAFGF SSS YFY
Subjt:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

A0A6J1IQE0 ethylene-responsive transcription factor LEP-like

4.4e-59

78.12

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE
        MRGSKARTNFVYSDMPHGSSVT+I+SPDDSQLFP  P PTPTSL QTQPNHL F L  DPFT + FPGNDWLPD+D     SYQPVTAFMDTGIPH D+E
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFP--PIPTPTSLSQTQPNHLGFNL--DPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSE

Query:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY
        LPPLPPDASSSY D ATM DWS +SSSSS+ G+DSNA  PPFPDT +D+FGFGSSS YFY
Subjt:  LPPLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

SwissProt top hits

e value

%identity

Alignment

Q9FZ90 Ethylene-responsive transcription factor ERF087

1.3e-07

35.67

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQ-----LFPPIPTPTSLSQTQPNHLGFNLDPFTTS-------PFPGNDWLPDADFSSTSSYQPVTAFMDT
        +RG  ARTNFVYSDMP GSSVTS +SPD+SQ     LF P   P+ L  T  N+   N    +T+        F  N W  +A+      YQ +T    +
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQ-----LFPPIPTPTSLSQTQPNHLGFNLDPFTTS-------PFPGNDWLPDADFSSTSSYQPVTAFMDT

Query:  GIPHDDSELPPLPPDA--SSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGS-SSTYFY
           H D ELPPLPP     +      T   W+ A +S     ++ +          S   GF S  ST+FY
Subjt:  GIPHDDSELPPLPPDA--SSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGS-SSTYFY

Q9M644 Ethylene-responsive transcription factor LEP

1.6e-10

39.22

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPF--PGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELP
        MRG++ARTNFVYSDMP  SSVTSI+SPDD    PP P P S +      + FN    T SP   P  D +    F  + S        D+      +ELP
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPF--PGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELP

Query:  PLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFG-FGS
        PLP D S+S + S   + W+    SS Y      +  PP  D+    F  FGS
Subjt:  PLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFG-FGS

Arabidopsis top hits

e value

%identity

Alignment

AT1G28160.1 Integrase-type DNA-binding superfamily protein

9.2e-09

35.67

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQ-----LFPPIPTPTSLSQTQPNHLGFNLDPFTTS-------PFPGNDWLPDADFSSTSSYQPVTAFMDT
        +RG  ARTNFVYSDMP GSSVTS +SPD+SQ     LF P   P+ L  T  N+   N    +T+        F  N W  +A+      YQ +T    +
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQ-----LFPPIPTPTSLSQTQPNHLGFNLDPFTTS-------PFPGNDWLPDADFSSTSSYQPVTAFMDT

Query:  GIPHDDSELPPLPPDA--SSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGS-SSTYFY
           H D ELPPLPP     +      T   W+ A +S     ++ +          S   GF S  ST+FY
Subjt:  GIPHDDSELPPLPPDA--SSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGS-SSTYFY

AT5G13910.1 Integrase-type DNA-binding superfamily protein

1.2e-11

39.22

Show/hide

Query:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPF--PGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELP
        MRG++ARTNFVYSDMP  SSVTSI+SPDD    PP P P S +      + FN    T SP   P  D +    F  + S        D+      +ELP
Subjt:  MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPF--PGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELP

Query:  PLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFG-FGS
        PLP D S+S + S   + W+    SS Y      +  PP  D+    F  FGS
Subjt:  PLPPDASSSYHDSATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFG-FGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTGGCTCCAAGGCTCGCACCAACTTTGTCTACTCGGACATGCCACATGGCTCCTCGGTCACTTCCATCATGTCTCCGGATGACTCCCAACTCTTCCCTCCAATTCC
AACCCCAACCTCCCTTTCCCAAACCCAACCCAATCACCTTGGCTTTAATCTCGACCCTTTCACCACTAGCCCATTCCCTGGCAACGATTGGCTCCCCGATGCCGATTTCT
CCTCGACCTCCTCCTACCAGCCTGTTACCGCCTTCATGGATACCGGCATCCCACATGACGACTCCGAGCTCCCTCCGCTCCCACCTGATGCTTCTTCCTCCTACCATGAC
TCGGCCACCATGTTTGATTGGTCCACTGCCTCCTCCTCTTCCTCTTACACGGGGTATGATTCCAACGCGGCTTTCCCGCCCTTCCCCGACACGGGTAGTGACGCCTTCGG
CTTCGGTTCCTCTTCGACCTATTTCTATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRGSKARTNFVYSDMPHGSSVTSIMSPDDSQLFPPIPTPTSLSQTQPNHLGFNLDPFTTSPFPGNDWLPDADFSSTSSYQPVTAFMDTGIPHDDSELPPLPPDASSSYHD
SATMFDWSTASSSSSYTGYDSNAAFPPFPDTGSDAFGFGSSSTYFY

Sed0018904 (gene) of Chayote v1 genome