CuGenDBv2

Gene ID	Sed0018936
Organism	Sechium edule (Chayote v1)
Description	Plant/protein
Genome location	LG08:5140777..5141531
RNA-Seq Expression	Sed0018936
Synteny	Sed0018936
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589876.1 hypothetical protein SDJN03_15299, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-33

61.42

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MAT+L TF+P  IRA   S D      R+ +S+++++NWWAP+ GWSSEPDYIDSGNK++P+NLA G  +SDPE +SAR R     FTE+KARQLRLMT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLA+DF++R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

XP_011656185.1 uncharacterized protein LOC105435656 [Cucumis sativus]

1.1e-38

69.29

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MATNLLTF PAGIRA   S DRR D +RR+TS  +++NWWAP+ GWSSEPDYIDSGNKA+PQNLAGG+ + D E +S R R     FTEAKARQLR+MT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLASDF++R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

XP_016903293.1 PREDICTED: uncharacterized protein LOC103502747 [Cucumis melo]

1.5e-35

67.19

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDS-GNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMT
        MATNLLTF+PAGIRA   S DRR D  RR+  A+++ NWWAP+ GWSSEPDYIDS  NKA+PQNLAG A + D E +S R R     FTEAKARQLR+MT
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDS-GNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMT

Query:  KGTDSFHDAMYHSAIASRLASDFENRTD
          T+SFHD MYHSAIASRLASDF++R D
Subjt:  KGTDSFHDAMYHSAIASRLASDFENRTD

XP_022960569.1 uncharacterized protein LOC111461308 [Cucurbita moschata]

3.0e-33

60.63

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MATNL TF+P  IRA   S D   ++ +  +S+++++NWWAP+ GWSSEPDYIDSGNK++P+NLA G  +SDPE +S+R R     FTE+KARQLRLMT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLA+DF++R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

XP_038880363.1 uncharacterized protein LOC120072011 [Benincasa hispida]

1.7e-39

70.08

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MATNLLTF PAGIRA   S DRR D  RR+TS  +++NWWAP+ GWSSEPDYIDS NKA+PQ+LAGG  +SDPE +S RAR     FTEAKARQLR+MT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLASDF+ R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTN7 Uncharacterized protein

5.2e-39

69.29

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MATNLLTF PAGIRA   S DRR D +RR+TS  +++NWWAP+ GWSSEPDYIDSGNKA+PQNLAGG+ + D E +S R R     FTEAKARQLR+MT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLASDF++R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

A0A1S4E4Y4 uncharacterized protein LOC103502747

7.1e-36

67.19

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDS-GNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMT
        MATNLLTF+PAGIRA   S DRR D  RR+  A+++ NWWAP+ GWSSEPDYIDS  NKA+PQNLAG A + D E +S R R     FTEAKARQLR+MT
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDS-GNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMT

Query:  KGTDSFHDAMYHSAIASRLASDFENRTD
          T+SFHD MYHSAIASRLASDF++R D
Subjt:  KGTDSFHDAMYHSAIASRLASDFENRTD

A0A5D3CSV6 Uncharacterized protein

7.1e-36

67.19

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDS-GNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMT
        MATNLLTF+PAGIRA   S DRR D  RR+  A+++ NWWAP+ GWSSEPDYIDS  NKA+PQNLAG A + D E +S R R     FTEAKARQLR+MT
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDS-GNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMT

Query:  KGTDSFHDAMYHSAIASRLASDFENRTD
          T+SFHD MYHSAIASRLASDF++R D
Subjt:  KGTDSFHDAMYHSAIASRLASDFENRTD

A0A6J1HBD8 uncharacterized protein LOC111461308

1.5e-33

60.63

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MATNL TF+P  IRA   S D   ++ +  +S+++++NWWAP+ GWSSEPDYIDSGNK++P+NLA G  +SDPE +S+R R     FTE+KARQLRLMT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLA+DF++R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

A0A6J1JBM9 uncharacterized protein LOC111485309

8.1e-32

59.84

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK
        MATNL TF+P  IRA   S D       RR ++++++NWWAP+ GWSSEPDYIDS NK++P+  A G  +SDPE +SAR R     FTE+KARQLRLMT 
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARAR-----FTEAKARQLRLMTK

Query:  GTDSFHDAMYHSAIASRLASDFENRTD
         T+SFHD MYHSAIASRLA+DF++R D
Subjt:  GTDSFHDAMYHSAIASRLASDFENRTD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G52720.1 unknown protein

2.3e-15

43.64

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Query:  IRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARARFTEAKARQLRLMTKGTDSFHDAMYHSAIASR
        IRAS+ S    PDQ R++++A     WWAP+ G  S+PDY++  +     N       S    +  R  FTE KA+QLR  T    +FHD MYHSAIASR
Subjt:  IRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARARFTEAKARQLRLMTKGTDSFHDAMYHSAIASR

Query:  LASDFENRTD
        LASD   R +
Subjt:  LASDFENRTD

AT3G15630.1 unknown protein

1.2e-14

43.97

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Query:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARARFTEAKARQLRLMTKGTDSF
        MAT +   + + IRAS+ S     D  R++    ++ +WWAP+ G SSEPDY++        NL     ++  E RS R   TE KA+QLR  T    +F
Subjt:  MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARARFTEAKARQLRLMTKGTDSF

Query:  HDAMYHSAIASRLASD
        HD MYHSAIASRLASD
Subjt:  HDAMYHSAIASRLASD

Sequences

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CDS sequence

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ATGGCGACCAACCTCCTCACTTTCTCCCCCGCCGGCATCCGCGCCTCCACCCCCTCCACCGACCGCCGCCCCGACCAGACTCGCCGGAGAACCTCCGCTGCCGCCGCCGC
TAACTGGTGGGCCCCGATCCTGGGCTGGTCCTCAGAGCCGGACTACATCGACTCCGGCAACAAGGCTGATCCTCAAAACCTCGCCGGCGGAGCTCCGGAGTCCGATCCGG
AGCCGAGATCGGCGAGGGCTCGGTTTACCGAGGCGAAGGCGCGGCAGCTCCGGCTGATGACGAAGGGAACGGATTCGTTTCACGACGCTATGTACCACTCGGCCATCGCA
TCTCGCCTCGCTTCCGACTTCGAAAATCGGACCGATTTCTGA

mRNA sequence

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AGGAAGCAAACAACCCCAATTCCTCTCTCTCTCTAAAAAAGCATTTTCCGATCATCTCTCTCTCTAAACATGGCGACCAACCTCCTCACTTTCTCCCCCGCCGGCATCCG
CGCCTCCACCCCCTCCACCGACCGCCGCCCCGACCAGACTCGCCGGAGAACCTCCGCTGCCGCCGCCGCTAACTGGTGGGCCCCGATCCTGGGCTGGTCCTCAGAGCCGG
ACTACATCGACTCCGGCAACAAGGCTGATCCTCAAAACCTCGCCGGCGGAGCTCCGGAGTCCGATCCGGAGCCGAGATCGGCGAGGGCTCGGTTTACCGAGGCGAAGGCG
CGGCAGCTCCGGCTGATGACGAAGGGAACGGATTCGTTTCACGACGCTATGTACCACTCGGCCATCGCATCTCGCCTCGCTTCCGACTTCGAAAATCGGACCGATTTCTG
ATCTCCGCCGGTACCGGCGGCCGCCGATCTATCTCTACTACTGCTTTTGTAATTATGTAGAATTGTATAAATTTAATTGCCAATTTCATGGATGATAAGTCGTAATTAAA
CTGTTTCTCTATCTGTTGTGTTTCTTTTTGGTTCTTTGTTTTGCCATTAGTTCTTAAATTTGTTAGATTAGTGACTGTATTAGTTTTCGTTTCGGGGCTGGAATGAATGA
ATTAATTTAACGGTGGATGAAGTATAAATTCACCATTGACGCGACACAAACAAATGGTGAAAGAACAAGTATTTAATAATAGATTAATTATAATT

Protein sequence

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MATNLLTFSPAGIRASTPSTDRRPDQTRRRTSAAAAANWWAPILGWSSEPDYIDSGNKADPQNLAGGAPESDPEPRSARARFTEAKARQLRLMTKGTDSFHDAMYHSAIA
SRLASDFENRTDF

Sed0018936 (gene) of Chayote v1 genome