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Sed0018945 (gene) of Chayote v1 genome

Gene IDSed0018945
OrganismSechium edule (Chayote v1)
DescriptionDefensin-like protein 3
Genome locationLG04:44927725..44928030
RNA-Seq ExpressionSed0018945
SyntenySed0018945
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50469.1 defensin-like protein 3 [Citrullus lanatus]1.2e-1362.86Show/hide
Query:  EGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC
        E WRK  LTIV+FI L+LASGWMV E    GR CYR S SFKG CSS+ +C   CDG+C HG+CIC +PC
Subjt:  EGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC

KAA0062795.1 defensin-like protein 3 [Cucumis melo var. makuwa]8.2e-1052.05Show/hide
Query:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC
        M  EG RK  LT+V+ I+L++ASGWMV E    GRVC+R   + KGVCSS+ +C   CDG+C  G C+C +PC
Subjt:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC

KGN44293.1 hypothetical protein Csa_016568 [Cucumis sativus]2.0e-0848Show/hide
Query:  GWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DC------DGYCIHGACICPMPC
        GW+KLT    +F+ LA+ASGWM+ E A  G++C+++SRSFKG C S  EC   C      DG+C +G CIC + C
Subjt:  GWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DC------DGYCIHGACICPMPC

XP_031744629.1 defensin-1-like [Cucumis sativus]3.2e-1460.27Show/hide
Query:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC
        M  EGWRK  LT+V+FI+L+LASGWMV E    GRVCYR S   KGVCSS  +C   CDG+C HG C+C +PC
Subjt:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC

XP_038887289.1 defensin-like protein 2 [Benincasa hispida]5.6e-1153.16Show/hide
Query:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCD------GYCIHGACICPMPC
        MA EGWRK  LT+V+FI LALASGWMV E    G+ C+++S SF+G C+S  EC   CD      GYC +G CIC + C
Subjt:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCD------GYCIHGACICPMPC

TrEMBL top hitse value%identityAlignment
A0A0A0K447 Uncharacterized protein9.7e-0948Show/hide
Query:  GWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DC------DGYCIHGACICPMPC
        GW+KLT    +F+ LA+ASGWM+ E A  G++C+++SRSFKG C S  EC   C      DG+C +G CIC + C
Subjt:  GWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DC------DGYCIHGACICPMPC

A0A5A7V3H5 Defensin-like protein 35.0e-0541.25Show/hide
Query:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETECD--C-------DGYCIHGACICPMPC
        M  EG RKLT+ +++F+V   ASGWMV +    G  CY+ S +F+G C+S  EC   C       DG+C    CIC   C
Subjt:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETECD--C-------DGYCIHGACICPMPC

A0A5D3BCI9 Defensin-like protein 32.0e-0644.59Show/hide
Query:  WRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCD------GYCIHGACICPMPC
        W+K  LT V F+ L++ASGWM+ E    G++C+++S SFKG C+S  EC   CD      G C +G CIC + C
Subjt:  WRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCD------GYCIHGACICPMPC

A0A5D3BEY4 Defensin-like protein 33.9e-1052.05Show/hide
Query:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC
        M  EG RK  LT+V+ I+L++ASGWMV E    GRVC+R   + KGVCSS+ +C   CDG+C  G C+C +PC
Subjt:  MAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC

W5RQN1 Defensin-like protein 35.9e-1462.86Show/hide
Query:  EGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC
        E WRK  LTIV+FI L+LASGWMV E    GR CYR S SFKG CSS+ +C   CDG+C HG+CIC +PC
Subjt:  EGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETEC--DCDGYCIHGACICPMPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGGCGAGAGAAGGATGGAGAAAACTCACATTAACCATCGTGATGTTCATCGTGCTAGCCCTAGCTTCTGGATGGATGGTGACGGAGGCGGCCGGACCTGGAAG
GGTTTGTTACCGGCGGAGCCGGAGCTTCAAGGGAGTGTGTTCGTCGGAGACGGAATGCGATTGCGACGGATATTGCATCCATGGAGCTTGCATTTGTCCCATGCCTTGCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGGCGAGAGAAGGATGGAGAAAACTCACATTAACCATCGTGATGTTCATCGTGCTAGCCCTAGCTTCTGGATGGATGGTGACGGAGGCGGCCGGACCTGGAAG
GGTTTGTTACCGGCGGAGCCGGAGCTTCAAGGGAGTGTGTTCGTCGGAGACGGAATGCGATTGCGACGGATATTGCATCCATGGAGCTTGCATTTGTCCCATGCCTTGCT
AA
Protein sequenceShow/hide protein sequence
MKMAREGWRKLTLTIVMFIVLALASGWMVTEAAGPGRVCYRRSRSFKGVCSSETECDCDGYCIHGACICPMPC