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Sed0019035 (gene) of Chayote v1 genome

Gene IDSed0019035
OrganismSechium edule (Chayote v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: Rib s in 87 species: Archae - 0; Bacteria - 746; Metazoa - 33; Fungi - 46; Plants - 57; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Genome locationLG01:12672087..12674653
RNA-Seq ExpressionSed0019035
SyntenySed0019035
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584340.1 hypothetical protein SDJN03_20272, partial [Cucurbita argyrosperma subsp. sororia]9.6e-4366.67Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK
        ++F   +RR+ IS  LQTLRSG L+  F +  S QSRCYSS +DKYNGLNSTS + KDSLVDDD+S EELKRKID FY+GD +SLP++FEAILKRKLSGK
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK

Query:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI
        H +ADDELMKEIRQ+MPG+VEDF DEEYDSDL  E  E+DE ++  S    S+EEDRR+
Subjt:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI

KAG7019929.1 hypothetical protein SDJN02_18896, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-4266.04Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK
        ++F   +RR+ IS  LQTLRSG L+  F +  S QSRCYSS +DKYNGLNST+ + KDSLVDDD+S EELKRKID FY+GD +SLP++FEAILKRKLSGK
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK

Query:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI
        H +ADDELMKEIRQ+MPG+VEDF DEEYDSDL  E  E+DE ++  S    S+EEDRR+
Subjt:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI

XP_022137035.1 uncharacterized protein LOC111008596 [Momordica charantia]1.1e-4365.62Show/hide
Query:  RSLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSG
        R++FNV+AR + IS  LQT  SG    RF + +S Q RCYSS++DKYNGLNST+NQ   S+VDDDVSTEELKRKID FY+GD +SLPS+FEAILKRKLSG
Subjt:  RSLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSG

Query:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVE---YSSDANDSDEEDR
        KHE ADDELMKEIRQ+MPGQ+EDF D+E  SDL+  +ETDE ++   ++ D++DS+EEDR
Subjt:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVE---YSSDANDSDEEDR

XP_022924024.1 uncharacterized protein LOC111431572 [Cucurbita moschata]2.8e-4266.04Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK
        ++F   +RR+ IS  LQTLRSG L+  F +  S QSRCYSS +DKYNGLNST+ + KDSLVDDDVS EELKRKID FY+GD +SLP++FEAILKRKLSGK
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK

Query:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI
        H +ADDELMKEIRQ++PG+VEDF DEEYDSDL  E  E+DE ++  S    S+EEDRR+
Subjt:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI

XP_023519890.1 uncharacterized protein LOC111783221 [Cucurbita pepo subsp. pepo]9.6e-4366.67Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK
        ++F V +RR+ IS  LQTLRSG L+  F +  + QSRCYS+ +DKYNGLNST+ + KDSLVDDDVS EELKRKID FY+GD +SLP++FEAILKRKLSGK
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK

Query:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI
        H +ADDELMKEIRQ+MPG+VEDF DEEYDSDL  E  ETDE +E     + S+EEDRR+
Subjt:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI

TrEMBL top hitse value%identityAlignment
A0A1S3CEX3 uncharacterized protein LOC1034999291.0e-3764.15Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQ-GDADSLPSLFEAILKRKLSG
        ++FNV +R + +S  L+T RS  L+     FS F  RCYSS +DKYN LNST N  KDSLVDDDVSTEELKRKID FY+ GDADSLP +FEAILKRKLSG
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQ-GDADSLPSLFEAILKRKLSG

Query:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVEYSSDANDSDEEDRRI
        KHE+ADDELMKEIRQ+MPG++EDF  EEYDS+L     TD+       A+DS+EED+RI
Subjt:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVEYSSDANDSDEEDRRI

A0A5D3BIA4 Uncharacterized protein1.0e-3764.15Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQ-GDADSLPSLFEAILKRKLSG
        ++FNV +R + +S  L+T RS  L+     FS F  RCYSS +DKYN LNST N  KDSLVDDDVSTEELKRKID FY+ GDADSLP +FEAILKRKLSG
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQ-GDADSLPSLFEAILKRKLSG

Query:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVEYSSDANDSDEEDRRI
        KHE+ADDELMKEIRQ+MPG++EDF  EEYDS+L     TD+       A+DS+EED+RI
Subjt:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVEYSSDANDSDEEDRRI

A0A6J1C5J6 uncharacterized protein LOC1110085965.5e-4465.62Show/hide
Query:  RSLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSG
        R++FNV+AR + IS  LQT  SG    RF + +S Q RCYSS++DKYNGLNST+NQ   S+VDDDVSTEELKRKID FY+GD +SLPS+FEAILKRKLSG
Subjt:  RSLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSG

Query:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVE---YSSDANDSDEEDR
        KHE ADDELMKEIRQ+MPGQ+EDF D+E  SDL+  +ETDE ++   ++ D++DS+EEDR
Subjt:  KHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVE---YSSDANDSDEEDR

A0A6J1E804 uncharacterized protein LOC1114315721.4e-4266.04Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK
        ++F   +RR+ IS  LQTLRSG L+  F +  S QSRCYSS +DKYNGLNST+ + KDSLVDDDVS EELKRKID FY+GD +SLP++FEAILKRKLSGK
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK

Query:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI
        H +ADDELMKEIRQ++PG+VEDF DEEYDSDL  E  E+DE ++  S    S+EEDRR+
Subjt:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDRRI

A0A6J1KP40 uncharacterized protein LOC1114952368.2e-4065.61Show/hide
Query:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK
        ++F   +RR+ I   LQTLRSG L+  F +  S QSRCYSS +DKYNGLNST+ + KDSLVDD VS EELKRKID FY+GD +SLP++FEAILKRKLSGK
Subjt:  SLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGK

Query:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDR
        H +ADDELMKEI Q+MPG+VEDF DEEYDSDL  +  ETDE +E  S    S+EEDR
Subjt:  HEEADDELMKEIRQQMPGQVEDFTDEEYDSDLD-ESKETDEGVEYSSDANDSDEEDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73770.1 FUNCTIONS IN: molecular_function unknown8.2e-0833.9Show/hide
Query:  YSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKE
        +SSESD   G  +          ++ +S EELK++I +F   G+ D++P LFEA++ RKLSGKH+++DDE+M  +R+          D + D + D   +
Subjt:  YSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKE

Query:  TDEGVEYSSDANDSDEED
        + +    S D  D D  D
Subjt:  TDEGVEYSSDANDSDEED

AT1G73770.2 FUNCTIONS IN: molecular_function unknown8.2e-0833.9Show/hide
Query:  YSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKE
        +SSESD   G  +          ++ +S EELK++I +F   G+ D++P LFEA++ RKLSGKH+++DDE+M  +R+          D + D + D   +
Subjt:  YSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTDEEYDSDLDESKE

Query:  TDEGVEYSSDANDSDEED
        + +    S D  D D  D
Subjt:  TDEGVEYSSDANDSDEED

AT3G18240.1 Ribosomal protein S24/S35, mitochondrial1.0e-1038.14Show/hide
Query:  RFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTD
        RFF   S ++   + ES      + T +  K  LV +DVS +ELK +I+ ++ +G+ D+LP + EA+L+R+L  KH E DDEL+++I + +P + +D  D
Subjt:  RFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTD

Query:  EEYDSDLDESKETDEGVE
        E+++SD +E+  TDE +E
Subjt:  EEYDSDLDESKETDEGVE

AT3G18240.2 Ribosomal protein S24/S35, mitochondrial1.0e-1038.14Show/hide
Query:  RFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTD
        RFF   S ++   + ES      + T +  K  LV +DVS +ELK +I+ ++ +G+ D+LP + EA+L+R+L  KH E DDEL+++I + +P + +D  D
Subjt:  RFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFY-QGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTD

Query:  EEYDSDLDESKETDEGVE
        E+++SD +E+  TDE +E
Subjt:  EEYDSDLDESKETDEGVE

AT4G21460.1 Ribosomal protein S24/S35, mitochondrial9.4e-1240.68Show/hide
Query:  RFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKID-NFYQGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTD
        RFF   S ++   ++ES      + T +  K  LV +DVS +ELK +ID +F +G+ D+LP + EA+L+R+L  KH E DDELM++I + +P + +D  D
Subjt:  RFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKID-NFYQGDADSLPSLFEAILKRKLSGKHEEADDELMKEIRQQMPGQVEDFTD

Query:  EEYDSDLDESKETDEGVE
        E+++SD +E+  TDE +E
Subjt:  EEYDSDLDESKETDEGVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTAAACCCTAGATCTCTGTTCAATGTCCATGCTCGGAGGATCTACATCTCTTCTTCCCTTCAAACCTTGCGCTCCGGTTCCTTAGTGGATCGATTTTTCCTTTT
TTCTTCGTTCCAATCGCGATGTTACTCATCTGAGAGTGATAAGTACAATGGATTGAACTCAACCTCGAATCAGATCAAGGATTCTCTCGTCGACGATGATGTCAGTACCG
AAGAGCTAAAGAGGAAGATAGATAACTTTTATCAGGGTGATGCTGATTCATTACCGTCACTGTTTGAAGCAATTTTGAAGAGAAAGCTATCGGGTAAACACGAAGAAGCC
GATGATGAGCTGATGAAAGAAATTCGGCAACAAATGCCGGGGCAGGTTGAAGATTTTACGGATGAAGAATACGATTCAGATTTAGATGAGTCGAAGGAGACTGATGAAGG
AGTGGAGTATTCCAGTGATGCCAATGATTCAGATGAAGAAGATAGAAGAATATAA
mRNA sequenceShow/hide mRNA sequence
GTAAGGTCATAAACCCTGAGAAAATGAGGCTAAACCCTAGATCTCTGTTCAATGTCCATGCTCGGAGGATCTACATCTCTTCTTCCCTTCAAACCTTGCGCTCCGGTTCC
TTAGTGGATCGATTTTTCCTTTTTTCTTCGTTCCAATCGCGATGTTACTCATCTGAGAGTGATAAGTACAATGGATTGAACTCAACCTCGAATCAGATCAAGGATTCTCT
CGTCGACGATGATGTCAGTACCGAAGAGCTAAAGAGGAAGATAGATAACTTTTATCAGGGTGATGCTGATTCATTACCGTCACTGTTTGAAGCAATTTTGAAGAGAAAGC
TATCGGGTAAACACGAAGAAGCCGATGATGAGCTGATGAAAGAAATTCGGCAACAAATGCCGGGGCAGGTTGAAGATTTTACGGATGAAGAATACGATTCAGATTTAGAT
GAGTCGAAGGAGACTGATGAAGGAGTGGAGTATTCCAGTGATGCCAATGATTCAGATGAAGAAGATAGAAGAATATAAGTTATAAGAATATAAGAGTATTTAAGGTGGAA
TTATTCAAATTTTAATCCGAACATATTAGGTGATAATGGTTGGTATATGTGAACTTGAACACCAAACAAGTGGAAATGGAAATTGATTCATGGAATTGTATGCATTATAT
AATTCTTAGG
Protein sequenceShow/hide protein sequence
MRLNPRSLFNVHARRIYISSSLQTLRSGSLVDRFFLFSSFQSRCYSSESDKYNGLNSTSNQIKDSLVDDDVSTEELKRKIDNFYQGDADSLPSLFEAILKRKLSGKHEEA
DDELMKEIRQQMPGQVEDFTDEEYDSDLDESKETDEGVEYSSDANDSDEEDRRI