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Sed0019078 (gene) of Chayote v1 genome

Gene IDSed0019078
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG08:8196934..8197801
RNA-Seq ExpressionSed0019078
SyntenySed0019078
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG73549.1 hypothetical protein EZV62_002128 [Acer yangbiense]1.6e-2136.26Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        ++ RV   GPW+F   L+ +     + +I +L F KA  W+QIH VP  CM   +AR L D++G +VEI  +    W G  ++++V ID+   L+  +R 
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  L-AVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLN-IDNGEILNS--YCYGEWLKAPFVKKNAPRSNDE
              +I++  L YE+LPDF F+   I H  KECL+ +   E L+     YG WLKAP  +K   R N +
Subjt:  L-AVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLN-IDNGEILNS--YCYGEWLKAPFVKKNAPRSNDE

XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]7.3e-2232.24Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        EK+R+++ GPW+FDR L+V++       + +  FT A  WVQIHN+P  CM  E+ + +G  IG + E++ D      G  +++R+ +++   L   + +
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKAPFVKKNA--PRSNDEGSGSESPKQEWQGN
           DG  +   + YEKLPDF F    I H  +ECL+   G+  +   YG W++A    + A   R  D G+G + P     G+
Subjt:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKAPFVKKNA--PRSNDEGSGSESPKQEWQGN

XP_015388532.1 uncharacterized protein LOC107178176 [Citrus sinensis]7.3e-2232.83Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        EK+R+++ GPW+FDR L+V+        + +  FT AP WVQIHN+P  CM  E+ + +G  IG + E+         G  ++IR+ +++ M L   + +
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKAPFVKKNA--PRSNDEGSGSESPKQEWQGNNGGR---RKGKGRSD
           DG  +   + YEKLPDF F    I H  +ECL+   G+  +   YG W++A    + A   R  D G+G + P     G+   +   RK  GR++
Subjt:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKAPFVKKNA--PRSNDEGSGSESPKQEWQGNNGGR---RKGKGRSD

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]9.5e-3036.63Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        EK RV+  GPW F++ L+V+ +    +  +++ F     W+QIHN+P  C++ E+A +LG ++G + EI+GD    W GP I++RV+ID+   L+ GI++
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNS-YCYGEWLKAPFVKKNAPRSNDE---GSGSESPKQEWQGNNGGRRKGKGRSDEPN
           DGK + CPL YEKLPDF +    I H  +EC         NS   YG+WL+A  +KK+     +E     G      +  G  GGR  G  R  + N
Subjt:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNS-YCYGEWLKAPFVKKNAPRSNDE---GSGSESPKQEWQGNNGGRRKGKGRSDEPN

Query:  WQ
        W+
Subjt:  WQ

XP_024045326.1 uncharacterized protein LOC112100347 [Citrus clementina]8.6e-2336.36Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        +K+RV+  GPW+FDR L+V+   K   ++ +  F+    WVQ+HNVP  CM +   R +G +IG + ++  D T +  G  I +R+ ID+   L+  +R+
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKA
           +G+ +V  ++YEKLPD+ F    I H  +EC     G+   S  YG WLKA
Subjt:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKA

TrEMBL top hitse value%identityAlignment
A0A5C7HTV0 CCHC-type domain-containing protein6.6e-2133.88Show/hide
Query:  GPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV-LAVDGKI
        GPW+FD+ L+V+   +    I ++ F +A  WVQIHN+P  CM   +A+ L ++IG ++EI  +    W G   +++V ID+   L+  +R+ L   G I
Subjt:  GPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV-LAVDGKI

Query:  VVCPLLYEKLPDFFFSYETIAHFTKECLNID-NGEIL--NSYCYGEWLKAPFVKKNAPRSNDEGSGSESPKQEWQGNNGGRRK
        VV  L YE+LP+F F+   I H   +C + +   E +   +  +G W++AP  +K   RS+ + SG  S +    G++ G RK
Subjt:  VVCPLLYEKLPDFFFSYETIAHFTKECLNID-NGEIL--NSYCYGEWLKAPFVKKNAPRSNDEGSGSESPKQEWQGNNGGRRK

A0A5C7IJL3 CCHC-type domain-containing protein1.3e-2132.38Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        ++ RV   GPW+FD+ L+V+   +    I +L+F KA  WVQIH++P  CM    A+ L ++IG ++EI  +    W G  ++++V ID+   L+  +R+
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  -LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNID-NGEIL--NSYCYGEWLKAPFVKKNAPRSNDEGSGSESPKQEWQGNNGGRRKGKGRSDEPN
         L   G +VV  L YE++P+F F+   + H   EC +I+   E +  N+  +G W++AP   K   +S+ + SG  S           R K  G S E  
Subjt:  -LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNID-NGEIL--NSYCYGEWLKAPFVKKNAPRSNDEGSGSESPKQEWQGNNGGRRKGKGRSDEPN

Query:  WQKKIAIKVG
         +  +AI++G
Subjt:  WQKKIAIKVG

A0A5C7IWT1 CCHC-type domain-containing protein7.9e-2236.26Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        ++ RV   GPW+F   L+ +     + +I +L F KA  W+QIH VP  CM   +AR L D++G +VEI  +    W G  ++++V ID+   L+  +R 
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  L-AVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLN-IDNGEILNS--YCYGEWLKAPFVKKNAPRSNDE
              +I++  L YE+LPDF F+   I H  KECL+ +   E L+     YG WLKAP  +K   R N +
Subjt:  L-AVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLN-IDNGEILNS--YCYGEWLKAPFVKKNAPRSNDE

A0A6J1D765 uncharacterized protein LOC1110179024.6e-3036.63Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        EK RV+  GPW F++ L+V+ +    +  +++ F     W+QIHN+P  C++ E+A +LG ++G + EI+GD    W GP I++RV+ID+   L+ GI++
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNS-YCYGEWLKAPFVKKNAPRSNDE---GSGSESPKQEWQGNNGGRRKGKGRSDEPN
           DGK + CPL YEKLPDF +    I H  +EC         NS   YG+WL+A  +KK+     +E     G      +  G  GGR  G  R  + N
Subjt:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNS-YCYGEWLKAPFVKKNAPRSNDE---GSGSESPKQEWQGNNGGRRKGKGRSDEPN

Query:  WQ
        W+
Subjt:  WQ

A0A6J1DVS4 uncharacterized protein LOC1110235553.9e-2136.84Show/hide
Query:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV
        EK RV   GPW FD+ L+++V     +  +++  +    WVQIH +   CMT ++A+ LG  +G + E+DG  + +W  P + +RV+I++L  L+ G++V
Subjt:  EKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRV

Query:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKE
           DGK + CPL YE+LPDF +    + H  +E
Subjt:  LAVDGKIVVCPLLYEKLPDFFFSYETIAHFTKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACAGAGGGTTATTTATGAGGGGCCTTGGTATTTTGATAGAGGATTAGTGGTCATTGTTAATCTCAAAGAAAATGATCATATTATTGAGTTGAAATTCACCAA
AGCACCTTCCTGGGTGCAAATTCACAATGTTCCAACCAATTGTATGACGATGGAGGTTGCAAGAGTATTGGGAGATGAAATAGGATCGATTGTGGAAATTGATGGGGATA
GAACCATCAATTGGACAGGGCCAGTTATTCAAATCAGAGTGGAAATAGATCTACTAATGTCATTGCAATGTGGTATTCGTGTCCTCGCAGTCGATGGAAAGATAGTGGTA
TGTCCCCTATTATATGAAAAACTTCCTGATTTTTTCTTTTCTTACGAAACTATTGCACACTTTACGAAAGAATGCTTAAATATTGATAATGGAGAAATTTTAAACTCTTA
TTGCTATGGTGAATGGCTTAAGGCCCCATTTGTTAAAAAGAATGCTCCAAGATCCAATGATGAAGGAAGTGGGAGTGAAAGTCCTAAGCAAGAATGGCAAGGAAATAATG
GGGGAAGGCGTAAAGGAAAGGGACGTAGTGATGAGCCTAATTGGCAGAAAAAAATTGCTATAAAGGTTGGTGATAAGGAGAAAGCAGAGCTGGAGAATATTACTAAACAA
CTTATCATTACCAATTTAACTAGCAAGAGAGATTTGCTTACAGAATTAGATATAGAGGCTAAATGTTCAGCAGTTACTAATGCTCAAGAAAATAGGGCAGTTAGTGTTAT
GAACAAAGAGAGATCTCACAAAATGGTAGAAGATGAAGTGTTAGAGGAAAAAAGACTTACTGATATTCAAACTAATGACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAACAGAGGGTTATTTATGAGGGGCCTTGGTATTTTGATAGAGGATTAGTGGTCATTGTTAATCTCAAAGAAAATGATCATATTATTGAGTTGAAATTCACCAA
AGCACCTTCCTGGGTGCAAATTCACAATGTTCCAACCAATTGTATGACGATGGAGGTTGCAAGAGTATTGGGAGATGAAATAGGATCGATTGTGGAAATTGATGGGGATA
GAACCATCAATTGGACAGGGCCAGTTATTCAAATCAGAGTGGAAATAGATCTACTAATGTCATTGCAATGTGGTATTCGTGTCCTCGCAGTCGATGGAAAGATAGTGGTA
TGTCCCCTATTATATGAAAAACTTCCTGATTTTTTCTTTTCTTACGAAACTATTGCACACTTTACGAAAGAATGCTTAAATATTGATAATGGAGAAATTTTAAACTCTTA
TTGCTATGGTGAATGGCTTAAGGCCCCATTTGTTAAAAAGAATGCTCCAAGATCCAATGATGAAGGAAGTGGGAGTGAAAGTCCTAAGCAAGAATGGCAAGGAAATAATG
GGGGAAGGCGTAAAGGAAAGGGACGTAGTGATGAGCCTAATTGGCAGAAAAAAATTGCTATAAAGGTTGGTGATAAGGAGAAAGCAGAGCTGGAGAATATTACTAAACAA
CTTATCATTACCAATTTAACTAGCAAGAGAGATTTGCTTACAGAATTAGATATAGAGGCTAAATGTTCAGCAGTTACTAATGCTCAAGAAAATAGGGCAGTTAGTGTTAT
GAACAAAGAGAGATCTCACAAAATGGTAGAAGATGAAGTGTTAGAGGAAAAAAGACTTACTGATATTCAAACTAATGACATTTAA
Protein sequenceShow/hide protein sequence
MEKQRVIYEGPWYFDRGLVVIVNLKENDHIIELKFTKAPSWVQIHNVPTNCMTMEVARVLGDEIGSIVEIDGDRTINWTGPVIQIRVEIDLLMSLQCGIRVLAVDGKIVV
CPLLYEKLPDFFFSYETIAHFTKECLNIDNGEILNSYCYGEWLKAPFVKKNAPRSNDEGSGSESPKQEWQGNNGGRRKGKGRSDEPNWQKKIAIKVGDKEKAELENITKQ
LIITNLTSKRDLLTELDIEAKCSAVTNAQENRAVSVMNKERSHKMVEDEVLEEKRLTDIQTNDI