; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019083 (gene) of Chayote v1 genome

Gene IDSed0019083
OrganismSechium edule (Chayote v1)
DescriptionLarge proline-rich protein bag6-B isoform X1
Genome locationLG01:18295515..18298365
RNA-Seq ExpressionSed0019083
SyntenySed0019083
Gene Ontology termsGO:0030433 - ubiquitin-dependent ERAD pathway (biological process)
GO:0071818 - BAT3 complex (cellular component)
GO:0031593 - polyubiquitin modification-dependent protein binding (molecular function)
GO:0051787 - misfolded protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037937.1 hypothetical protein SDJN02_01570 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-6679.33Show/hide
Query:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG
        MNRFERAI    S  GG  PR ELPTNPQDLQTP+SL IVLRNAQ LLS+YAI SLP I ERFEQ+GSSTDPMVRGQ+QEEL+QVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN
        SSILTL LEQSTID +DL QR+ STNSPMDVFRAV+ESSAQVSG +SEDIADELCS +TLAEEYL IL++DI RRL+ N
Subjt:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN

XP_022982322.1 uncharacterized protein LOC111481190 isoform X1 [Cucurbita maxima]8.1e-6779.33Show/hide
Query:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG
        MNRFERAI    S  GGV PR ELPTNPQDLQTP+SL IVLRNAQ LLSDYAI SLP I ERFEQ+GSSTDPMVRGQ+QEEL+QVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN
        SSILTL LEQSTID +DL QR+ STNSPMDVFRAV+ESSAQVSG ++EDIADELCS + LAEEYL IL++DI RRL+ N
Subjt:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN

XP_022982323.1 uncharacterized protein LOC111481190 isoform X2 [Cucurbita maxima]3.1e-6679.21Show/hide
Query:  MNRFERAISH---IGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGS
        MNRFERAIS      GV PR ELPTNPQDLQTP+SL IVLRNAQ LLSDYAI SLP I ERFEQ+GSSTDPMVRGQ+QEEL+QVGLRMQ FGALLLDLGS
Subjt:  MNRFERAISH---IGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGS

Query:  SILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN
        SILTL LEQSTID +DL QR+ STNSPMDVFRAV+ESSAQVSG ++EDIADELCS + LAEEYL IL++DI RRL+ N
Subjt:  SILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN

XP_023525663.1 uncharacterized protein LOC111789201 isoform X2 [Cucurbita pepo subsp. pepo]3.1e-6678.77Show/hide
Query:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG
        MNRFERAI    S  GG  PR ELPTNPQDLQTP+SL IVLRNAQ LLS+YAI SLP I ERFEQ+GSSTDPMVRGQ+QEEL+QVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN
        SSILTL LEQSTID +DL QR+ STNSPMDVFRAV+ESSAQVSG ++EDIADELCS +TLAEEYL IL++DI RRL+ N
Subjt:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN

XP_038899964.1 uncharacterized protein LOC120087140 isoform X1 [Benincasa hispida]2.9e-7281.92Show/hide
Query:  MNRFERAISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSIL
        MNRFERAIS  GG  PR ELPTNPQ+LQTPESLGIVLRNAQRLLSDYAISSLP I ERFEQ+GSSTDP VRGQ+QEEL+Q+GLRMQ FGALLLDLGSSIL
Subjt:  MNRFERAISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSIL

Query:  TLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSE
        TLRLEQSTIDL+DL QRV+STN PMDVFRAV+ESSA++SG+S +D+A ELC+DETLAEEYLE+  SDINRRL++NSE
Subjt:  TLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSE

TrEMBL top hitse value%identityAlignment
A0A1S3BV17 uncharacterized protein LOC103493795 isoform X13.3e-6675.27Show/hide
Query:  MNRFERA--ISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSS
        MNRFERA  IS  GG  PR ELPTNPQ+LQ+PESL IVLRNAQ+LLSDYAI SLP I ERFEQ+GSS+DP VRGQ+QEEL+QVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQE
        ILTLRLEQST+DL+DL +RV+STN PMDVFRAV+ESSA++SG+S+ DIA+ LC+ ++LAEEYLEIL SDI RRL++NSE ++
Subjt:  ILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQE

A0A5A7VE91 Large proline-rich protein bag6-B isoform X13.3e-6675.27Show/hide
Query:  MNRFERA--ISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSS
        MNRFERA  IS  GG  PR ELPTNPQ+LQ+PESL IVLRNAQ+LLSDYAI SLP I ERFEQ+GSS+DP VRGQ+QEEL+QVGLRMQ FGALLLDLGSS
Subjt:  MNRFERA--ISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSS

Query:  ILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQE
        ILTLRLEQST+DL+DL +RV+STN PMDVFRAV+ESSA++SG+S+ DIA+ LC+ ++LAEEYLEIL SDI RRL++NSE ++
Subjt:  ILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQE

A0A6J1IFG5 uncharacterized protein LOC111476470 isoform X13.3e-6676.11Show/hide
Query:  MNRFERAISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSIL
        MNRFERAIS  GG     ELPTNPQ LQT +SLGIVLRNAQ+LL DYA SSLP I ERFE+ GSSTDP VRGQ+QEEL+QVGLRMQ FGALLLDLG+SIL
Subjt:  MNRFERAISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSIL

Query:  TLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQE
         LRLEQSTID++D+ +RVI +NSPMDVFRAV+ESSAQ+SG+SSEDIA+ELCS +TLA+EYLE+L+SDINRRL+ NSE Q+
Subjt:  TLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQE

A0A6J1IWC0 uncharacterized protein LOC111481190 isoform X13.9e-6779.33Show/hide
Query:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG
        MNRFERAI    S  GGV PR ELPTNPQDLQTP+SL IVLRNAQ LLSDYAI SLP I ERFEQ+GSSTDPMVRGQ+QEEL+QVGLRMQ FGALLLDLG
Subjt:  MNRFERAI----SHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLG

Query:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN
        SSILTL LEQSTID +DL QR+ STNSPMDVFRAV+ESSAQVSG ++EDIADELCS + LAEEYL IL++DI RRL+ N
Subjt:  SSILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN

A0A6J1J4J7 uncharacterized protein LOC111481190 isoform X21.5e-6679.21Show/hide
Query:  MNRFERAISH---IGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGS
        MNRFERAIS      GV PR ELPTNPQDLQTP+SL IVLRNAQ LLSDYAI SLP I ERFEQ+GSSTDPMVRGQ+QEEL+QVGLRMQ FGALLLDLGS
Subjt:  MNRFERAISH---IGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGS

Query:  SILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN
        SILTL LEQSTID +DL QR+ STNSPMDVFRAV+ESSAQVSG ++EDIADELCS + LAEEYL IL++DI RRL+ N
Subjt:  SILTLRLEQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENN

SwissProt top hitse value%identityAlignment
D5LXJ0 Ubiquitin-like domain-containing protein CIP733.7e-0631.82Show/hide
Query:  LPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSILTLRLEQS
        L + P+ L +P SL  VL + +R++ + A   L  +  + E +    DP+ R   Q   ++ G+   + GA LL+LG + +TLRL Q+
Subjt:  LPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSILTLRLEQS

Arabidopsis top hitse value%identityAlignment
AT5G42220.1 Ubiquitin-like superfamily protein6.2e-2552.99Show/hide
Query:  MNRFERAISHIG----------GVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGA
        +NR E+A+S  G          G +PR ELP N +   TPE+L +VLRNAQ LLS   +SSL  I  R EQ+GSS+DP +R Q+Q E +QVGL MQH GA
Subjt:  MNRFERAISHIG----------GVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGA

Query:  LLLDLGSSILTLRLEQS
        LLL+LG +ILTLR+  S
Subjt:  LLLDLGSSILTLRLEQS

AT5G42220.1 Ubiquitin-like superfamily protein1.3e-0635.14Show/hide
Query:  EQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSEL
        + S ++++ + Q +  ++ P DVFRA++E++A     S +++ +ELC DE L++EY E+L  DI  RL+++  L
Subjt:  EQSTIDLEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGGTTCGAGCGTGCAATATCTCACATTGGTGGAGTTCAACCAAGGTTGGAACTACCCACCAATCCTCAAGATTTGCAAACTCCTGAATCTTTGGGCATTGTTTT
GCGAAATGCACAACGGCTACTAAGTGATTATGCTATATCTTCACTACCGTGCATTATTGAGCGATTTGAGCAAAATGGCTCTTCAACTGATCCCATGGTGAGGGGTCAAA
TGCAAGAAGAATTAATACAAGTAGGACTTAGGATGCAACATTTTGGAGCCCTTCTTCTCGATCTTGGTAGTTCAATCTTGACGCTTCGTTTGGAACAGTCAACGATTGAC
CTGGAAGATCTAACTCAAAGGGTTATATCTACAAATTCTCCTATGGATGTGTTTCGTGCTGTTATTGAGAGTTCAGCTCAAGTTTCTGGCACTAGTAGTGAAGATATTGC
AGATGAGCTATGTAGCGATGAGACACTGGCTGAGGAATATTTAGAGATATTAACAAGTGATATAAACCGACGTTTAGAAAACAATTCAGAACTACAGGAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGGTTCGAGCGTGCAATATCTCACATTGGTGGAGTTCAACCAAGGTTGGAACTACCCACCAATCCTCAAGATTTGCAAACTCCTGAATCTTTGGGCATTGTTTT
GCGAAATGCACAACGGCTACTAAGTGATTATGCTATATCTTCACTACCGTGCATTATTGAGCGATTTGAGCAAAATGGCTCTTCAACTGATCCCATGGTGAGGGGTCAAA
TGCAAGAAGAATTAATACAAGTAGGACTTAGGATGCAACATTTTGGAGCCCTTCTTCTCGATCTTGGTAGTTCAATCTTGACGCTTCGTTTGGAACAGTCAACGATTGAC
CTGGAAGATCTAACTCAAAGGGTTATATCTACAAATTCTCCTATGGATGTGTTTCGTGCTGTTATTGAGAGTTCAGCTCAAGTTTCTGGCACTAGTAGTGAAGATATTGC
AGATGAGCTATGTAGCGATGAGACACTGGCTGAGGAATATTTAGAGATATTAACAAGTGATATAAACCGACGTTTAGAAAACAATTCAGAACTACAGGAAAAATAA
Protein sequenceShow/hide protein sequence
MNRFERAISHIGGVQPRLELPTNPQDLQTPESLGIVLRNAQRLLSDYAISSLPCIIERFEQNGSSTDPMVRGQMQEELIQVGLRMQHFGALLLDLGSSILTLRLEQSTID
LEDLTQRVISTNSPMDVFRAVIESSAQVSGTSSEDIADELCSDETLAEEYLEILTSDINRRLENNSELQEK