CuGenDBv2

Gene ID	Sed0019097
Organism	Sechium edule (Chayote v1)
Description	Retrotransposon protein
Genome location	LG09:29316913..29318224
RNA-Seq Expression	Sed0019097
Synteny	Sed0019097
Gene Ontology terms	NA
InterPro domains	IPR027806 - Harbinger transposase-derived nuclease domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]

4.6e-120

56.66

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+SRHF  +L AVIR H+ L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR N  +V  GYYYL DAGYPN +GFLAPYRG+RYHL +WRG  N P    EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]

1.6e-120

56.92

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+SRHF  +L AVIR HD L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR N  +V  GYYYL DAGYPN +GFLAPYRG+RYHL +WRG  N P    EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

KAA0047510.1 retrotransposon protein [Cucumis melo var. makuwa]

5.1e-119

56.4

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CRE+TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+S HF  +L AVIR H+ L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR NG +V  GYYYL DAGYPN +GFLAPYRG+RYHL +W G  N P    EFFN  H SARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]

8.7e-119

56.4

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+SRHF  +L AVIR H+ L KK +P+   C D RWKWFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEG AADSR+LRD LSR N  +V  GYYYL DAGY N +GFLAPYRG+RYHL +WRG  N P    EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]

2.5e-118

55.87

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL C ++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHIL HDVKNRV++R F RSGET+SRHF  +L AVIR H+ L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR N  +V  GYYYL DAGYPN +GFLAPYRG+RYHL +WRG  N P    EFFN  HS ARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TWH8 Retrotransposon protein

2.5e-119

56.4

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CRE+TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+S HF  +L AVIR H+ L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR NG +V  GYYYL DAGYPN +GFLAPYRG+RYHL +W G  N P    EFFN  H SARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

A0A5A7TXW1 Retrotransposon protein

7.7e-121

56.92

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+SRHF  +L AVIR HD L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR N  +V  GYYYL DAGYPN +GFLAPYRG+RYHL +WRG  N P    EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

A0A5A7U476 Retrotransposon protein

4.2e-119

56.4

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+SRHF  +L AVIR H+ L KK +P+   C D RWKWFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEG AADSR+LRD LSR N  +V  GYYYL DAGY N +GFLAPYRG+RYHL +WRG  N P    EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

A0A5A7U9H2 Retrotransposon protein

1.2e-118

55.87

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL C ++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHIL HDVKNRV++R F RSGET+SRHF  +L AVIR H+ L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR N  +V  GYYYL DAGYPN +GFLAPYRG+RYHL +WRG  N P    EFFN  HS ARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

A0A5D3BDX0 Retrotransposon protein

2.2e-120

56.66

Show/hide

Query:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT +GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMF

Query:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC
        LHILAHDVKNRV++R F RSGET+SRHF  +L AVIR H+ L KK +P+   C D RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRD LSR N  +V  GYYYL DAGYPN +GFLAPYRG+RYHL +WRG  N P    EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRG-SNPPRNPGEFFNKAHSSARNIIERAFGALK

Query:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF
         RW ILR KS+YP++VQ + I ACCLLHNLI REM +    + + E D+T      DD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWTILRRKSFYPLKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMF

SwissProt top hits

e value

%identity

Alignment

B0BN95 Putative nuclease HARBI1

1.1e-10

Show/hide

Query:  LGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYH
        +GA+D  H+ ++ P     S+ NRKG+ + N LVVC   G  + V   W GS  D  VL +  LS      +    + L D+ +     FL  +     H
Subjt:  LGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYH

Query:  LSDWRGSNPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTIL---RRKSFYPLKVQVKIITACCLLHNL
        +        P  P E+ +N+AHS+  ++IE+    L  R+  L   +    Y  +    II ACC+LHN+
Subjt:  LSDWRGSNPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTIL---RRKSFYPLKVQVKIITACCLLHNL

Q17QR8 Putative nuclease HARBI1

1.4e-10

29.41

Show/hide

Query:  LGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYH
        +G +D  H+ ++ P     S+ NRKG+ + N L+VC   G  + V   W GS  D  VL +  LS      +    + L D+ +     FL  +     H
Subjt:  LGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYH

Query:  LSDWRGSNPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTIL---RRKSFYPLKVQVKIITACCLLHNL
        +        P  P E+ +N AHS+  ++IE+ F  L +R+  L   +    Y  +    II ACC+LHN+
Subjt:  LSDWRGSNPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTIL---RRKSFYPLKVQVKIITACCLLHNL

Q6AZB8 Putative nuclease HARBI1

9.1e-10

28.74

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Query:  NCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERY
        N  G +D  HI ++ P  + +S+ N+KG  + N  +VC   G  +     W GS  D    R V  ++N  +       L +    + +G+L      RY
Subjt:  NCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERY

Query:  HLSDWRGS--NPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTILRRKSFY----PLKVQVKIITACCLLHNL
         L  W  +    P +P ++ +N AH++   I++R F A++ R+  L     Y    P K    II ACC+LHN+
Subjt:  HLSDWRGS--NPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTILRRKSFY----PLKVQVKIITACCLLHNL

Q96MB7 Putative nuclease HARBI1

6.3e-11

29.41

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Query:  LGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYH
        +G +D  H+ ++ P     S+ NRKG+ + N L+VC   G  + V   W GS  D  VL +  LS      +    + L D+ +     FL  +     H
Subjt:  LGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYH

Query:  LSDWRGSNPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTIL---RRKSFYPLKVQVKIITACCLLHNL
        +        P  P E+ +N AHS+  ++IE+ F  L +R+  L   +    Y  +    II ACC+LHN+
Subjt:  LSDWRGSNPPRNPGEF-FNKAHSSARNIIERAFGALKNRWTIL---RRKSFYPLKVQVKIITACCLLHNL

Q9M2U3 Protein ALP1-like

5.9e-17

26.09

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Query:  RMNRSCFETLCDMLRTHSGLRGTDYID-------VEEMVAMFLHILAHDVKNRVVRRIFTRSGETVS----RHFQSILTAVIRCHDILYKKLEPIQPSCA
        +++R  F+ +C +++     +  ++ D       + + VA+ L  L       V+   F  +  TVS    R  +S+    I  H     KL+ I+    
Subjt:  RMNRSCFETLCDMLRTHSGLRGTDYID-------VEEMVAMFLHILAHDVKNRVVRRIFTRSGETVS----RHFQSILTAVIRCHDILYKKLEPIQPSCA

Query:  DSRWKWFENCLGALDGTHIELQVPV---ENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQ--VSHG-----------
          +     NC GA+D THI + +P     N+      K    T +  V  P   F+ V+AGW GS  D     DV+ +N+GF   V  G           
Subjt:  DSRWKWFENCLGALDGTHIELQVPV---ENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQ--VSHG-----------

Query:  ------YYYLCDAGYPNVDGFLAPYRGERYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQV-KIITACCLLHNLIC
               Y + D+G+P +   L PY+G+           P   P   FNK HS A    + A   LK+RW I+    + P + ++ +II  CCLLHN+I 
Subjt:  ------YYYLCDAGYPNVDGFLAPYRGERYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQV-KIITACCLLHNLIC

Query:  REMGSTIGLEILGENDATLYQE
             T+  + L +     Y++
Subjt:  REMGSTIGLEILGENDATLYQE

Arabidopsis top hits

e value

%identity

Alignment

AT1G43722.1 unknown protein

2.3e-40

37.88

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Query:  IRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMFLHILAHDVKNRVVRRIFTRSGETVSRHFQSILTA--VIRCHDI-------LYK
        ++Q   AC +  RM+  CF TLC+ML+T+  L+ T  I +EE VAMFL I  H+   R V   F R+ ETV R F+ +LTA  ++ C  I       LY+
Subjt:  IRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMFLHILAHDVKNRVVRRIFTRSGETVSRHFQSILTA--VIRCHDI-------LYK

Query:  KLEPIQPSCADSR-WKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHG-YYYL
          E +Q    D R W +F   +GA+DGTH+ ++V  + +  + NR    + N++ +C     F Y+  G  GS  D+ VL+     ++ F +     YYL
Subjt:  KLEPIQPSCADSR-WKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHG-YYYL

Query:  CDAGYPNVDGFLAPYRGE-----RYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNR
         D+GYPN  G LAPYR       RYH+S +     PRN  E FN+ H+S R++IER F   KN+
Subjt:  CDAGYPNVDGFLAPYRGE-----RYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNR

AT5G12010.1 unknown protein

6.4e-19

26.83

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Query:  RETTRMNRSCFETLCDMLRTHSGLRGT---DYIDVEEMVAMFLHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKL--EPIQPSCADS
        ++  RM++S FE +CD L +      T   + I V + VA+ +  LA     R+V + F   G  +S   + +L       D+L  K    P   S  + 
Subjt:  RETTRMNRSCFETLCDMLRTHSGLRGT---DYIDVEEMVAMFLHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKL--EPIQPSCADS

Query:  RWKW-----FENCLGALDGTHIELQVPVENRASF-------RNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVL--SRNNGFQVSHGYYYL
        R ++       N +G++  THI +  P  + AS+       RN+K   +  +  V  P G F  +  GW GS  D +VL   L   R N   +  G +  
Subjt:  RWKW-----FENCLGALDGTHIELQVPVENRASF-------RNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVL--SRNNGFQVSHGYYYL

Query:  CDAGYPNVDGFLAPYRGERYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQVKIITACCLLHNL
           G+P +D  L PY  +    +              FN+  S  + + + AFG LK RW  L++++   L+    ++ ACC+LHN+
Subjt:  CDAGYPNVDGFLAPYRGERYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQVKIITACCLLHNL

AT5G28950.1 unknown protein

2.7e-17

52.7

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Query:  WKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNN
        + +F++C+GA+D THI   V  +   SFRNRKG I+ N+L  C    EF+YVL+GWEGSA DS+VL D L+RN+
Subjt:  WKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNN

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

1.0e-24

44.7

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Query:  FIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRGS-NPPRNPGEFFNKAHSSARNIIERAFGALKNRWTI
        FIYVL+GWEGSA DSRVL D L +          +YL D G+ N   FLAP+RG RYHL ++ G    P  P E FN  H S RN+IER FG  K+R+ I
Subjt:  FIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRGS-NPPRNPGEFFNKAHSSARNIIERAFGALKNRWTI

Query:  LRRKSFYPLKVQVKIITACCLLHNLICREMGS
         +    +  K Q  ++  C  LHN + +E  S
Subjt:  LRRKSFYPLKVQVKIITACCLLHNLICREMGS

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

4.7e-54

40.37

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Query:  CRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMFLHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKW
        C E  RM++  F  LCD+L+T   LR T+ I +E  +A+FL I+ H+++ R V+ +F  SGET+SRHF ++L AVI      ++          ++   +
Subjt:  CRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMFLHILAHDVKNRVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKW

Query:  FENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGE
        F++C+G +D  HI + V V+ +  FRN  G++T NVL   +    F YVLAGWEGSA+D +VL   L+R N  QV  G YY+ D  YPN+ GF+APY G 
Subjt:  FENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGE

Query:  RYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQVKIITACCLLHNLI
                 +N      E FN+ H      I R FGALK R+ IL     YPL+ QVK++ A C LHN +
Subjt:  RYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQVKIITACCLLHNLI

Sequences

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CDS sequence

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ATGGATCCTGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCGAATCTTGTAATGAACTACAACCCTAGGACAAAAAACTA
TAGCTCTTTCTTTAGACACCATTTTCGCCAAATGACCTTTTTCTCGATGATAAGACAAAGCGATTTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAA
CTTTGTGCGACATGCTAAGGACCCACAGTGGTCTTCGAGGTACAGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCTTGGCTCATGATGTTAAGAAC
CGTGTCGTTCGAAGAATATTTACAAGATCCGGCGAAACAGTGTCGCGACACTTTCAATCTATCCTTACTGCTGTTATTCGTTGTCATGACATTTTGTACAAGAAACTTGA
ACCTATCCAACCATCATGCGCCGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGCATTAGATGGTACTCATATAGAGTTACAAGTCCCAGTTGAAAATCGTGCCT
CCTTTAGAAATAGGAAGGGTATCATCACAACGAATGTTCTTGTTGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCT
AGAGTTCTTAGGGATGTTTTATCCCGTAACAATGGATTTCAAGTCTCTCATGGATACTATTACCTTTGTGATGCGGGTTATCCAAATGTTGATGGGTTCTTAGCTCCCTA
TAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACGGAATCCGGGAGAGTTTTTTAATAAAGCACACTCCTCGGCACGAAATATAATAGAAAGAG
CATTCGGTGCATTAAAAAACCGCTGGACTATTCTGCGGCGCAAGTCTTTCTATCCTCTGAAAGTACAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATA
TGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAAAACGATGCCACACTCTACCAAGAAGAAATGGATGATACCCCGACGATTAATTTCGTCGAGACATC
GCCTCTTTGGACCACATTTCGAGATTTCATGGCCCAAAGAATGTTTGACGCAACCCAAAACTAG

mRNA sequence

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Protein sequence

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MDPDKTIAVLTILYTWQNQFLLLANLVMNYNPRTKNYSSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHSGLRGTDYIDVEEMVAMFLHILAHDVKN
RVVRRIFTRSGETVSRHFQSILTAVIRCHDILYKKLEPIQPSCADSRWKWFENCLGALDGTHIELQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADS
RVLRDVLSRNNGFQVSHGYYYLCDAGYPNVDGFLAPYRGERYHLSDWRGSNPPRNPGEFFNKAHSSARNIIERAFGALKNRWTILRRKSFYPLKVQVKIITACCLLHNLI
CREMGSTIGLEILGENDATLYQEEMDDTPTINFVETSPLWTTFRDFMAQRMFDATQN

Sed0019097 (gene) of Chayote v1 genome