; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019100 (gene) of Chayote v1 genome

Gene IDSed0019100
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent Clp protease adapter protein ClpS
Genome locationLG07:36066976..36069732
RNA-Seq ExpressionSed0019100
SyntenySed0019100
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030163 - protein catabolic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR003769 - Adaptor protein ClpS, core
IPR014719 - Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
IPR022935 - ATP-dependent Clp protease adaptor protein ClpS


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446565.1 PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X1 [Cucumis melo]6.9e-7891.88Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLA+SPN VFNPKPGDRSS+C+GLC N GAS++KSA TAGRGGGLLERPV+EKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

XP_011655763.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Cucumis sativus]5.3e-7893.12Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPN VFNPKPGDRSSVC+GLC N GAS++KSA TAGRGGGLLERPV+EKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAE HCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

XP_022150471.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Momordica charantia]2.6e-7791.88Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPN VFNP+PGD++ VCRGLCS+LGA+I+KSATTAG+GGGLLERPV+EKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

XP_022968529.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like [Cucurbita maxima]2.4e-7591.93Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGR-GGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        MEIAI GKLALSPN VFNPKPGDRSSVC+GLCS L AS++KSATTAGR GGGLLERPV+EKATPGRESEFDLRRSRK TPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGR-GGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        LMKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

XP_038891525.1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X2 [Benincasa hispida]5.3e-7893.12Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPN VFNPKPGDRSSVC+GLCSN GAS++KSA TAGRGGGLLERPV+EKATPGRESEFDLR+SRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

TrEMBL top hitse value%identityAlignment
A0A0A0KWD9 ClpS domain-containing protein2.6e-7893.12Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPN VFNPKPGDRSSVC+GLC N GAS++KSA TAGRGGGLLERPV+EKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAE HCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

A0A1S3BG61 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like isoform X13.3e-7891.88Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLA+SPN VFNPKPGDRSS+C+GLC N GAS++KSA TAGRGGGLLERPV+EKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

A0A5A7STJ9 ATP-dependent Clp protease adapter protein CLPS13.3e-7891.88Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLA+SPN VFNPKPGDRSS+C+GLC N GAS++KSA TAGRGGGLLERPV+EKATPGRESEFD+RRSRKMTPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

A0A6J1DBL1 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic1.3e-7791.88Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL
        MEIAI GKLALSPN VFNP+PGD++ VCRGLCS+LGA+I+KSATTAG+GGGLLERPV+EKATPGRESEFDLRRSRK TPPYRVILHNDDFNKREYVVQVL
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVL

Query:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  MKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

A0A6J1HZX0 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like1.2e-7591.93Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGR-GGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        MEIAI GKLALSPN VFNPKPGDRSSVC+GLCS L AS++KSATTAGR GGGLLERPV+EKATPGRESEFDLRRSRK TPPYRVILHNDDFN+REYVVQV
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGR-GGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC
        LMKVIPGMTLDNAVNIMQEAH NGLSLVIICAQADAEEHCMQLRGNGLLSSIEPA SGGCC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC

SwissProt top hitse value%identityAlignment
A0A2K3CNL6 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic4.3e-2249.09Show/hide
Query:  GGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLS
        GG+++ P     T  ++    + RS+K  P Y+V+LHND++NKREYVV+VL+KV+  +T+D+AV  MQEAH  G++LV+ C Q +AE +C  LR NGL S
Subjt:  GGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLS

Query:  SIEPATSGGC
        +IEP   GGC
Subjt:  SIEPATSGGC

Q31QE7 ATP-dependent Clp protease adapter protein ClpS2.6e-1959.49Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL SSIEP
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP

Q3AUR5 ATP-dependent Clp protease adapter protein ClpS3.3e-1443.62Show/hide
Query:  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP
        +PG  +  D    R RK +P Y+V+LHND  N  EYV+  L +V+P ++  +A+ +M EAH  G+ LVI+C    AE +C  L+  GL SSIEP
Subjt:  TPGRESEFDL--RRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEP

Q5N3U1 ATP-dependent Clp protease adapter protein ClpS1.2e-1657.53Show/hide
Query:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGL
        RK+ P YRV+LHNDDFN  EYVV VLM+ +P +T   AV+IM EAH NG  LVI C    AE +C QL+ +GL
Subjt:  RKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGL

Q9SX29 ATP-dependent Clp protease adapter protein CLPS1, chloroplastic2.6e-5969.38Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTA-GRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AI G+LAL+P+ +FN K GD+  V +G C N    +  S + A G+GGG+L++P++EK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTA-GRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGC
        LMKVIPGMT+DNAVNIMQEAH NGL++VI+CAQADAE+HCMQLRGNGLLSS+EP   GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGC

Arabidopsis top hitse value%identityAlignment
AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein1.8e-6069.38Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTA-GRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AI G+LAL+P+ +FN K GD+  V +G C N    +  S + A G+GGG+L++P++EK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTA-GRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGC
        LMKVIPGMT+DNAVNIMQEAH NGL++VI+CAQADAE+HCMQLRGNGLLSS+EP   GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGC

AT1G68660.2 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein4.7e-4053.75Show/hide
Query:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTA-GRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV
        ME AI G+LAL+P+ +FN K GD+  V +G C N    +  S + A G+GGG+L++P++EK TPGRESEFDLR+S+K+ PPYRVILHND+FNKREYVVQV
Subjt:  MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTA-GRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQV

Query:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGC
        LMK                              ADAE+HCMQLRGNGLLSS+EP   GGC
Subjt:  LMKVIPGMTLDNAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCGATTTCTGGGAAGTTAGCTCTCTCGCCCAACCCTGTCTTCAACCCCAAACCAGGGGACAGAAGTTCTGTGTGTAGAGGGCTATGCTCGAACTTAGGCGC
ATCGATTATTAAATCGGCCACAACAGCAGGTAGAGGAGGCGGGTTGTTGGAGAGGCCTGTTGTCGAGAAAGCTACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGAT
CGAGGAAAATGACGCCACCATACCGTGTCATCCTGCATAATGACGATTTCAATAAACGAGAATACGTCGTTCAAGTCCTGATGAAAGTCATCCCTGGAATGACGCTCGAT
AATGCAGTTAACATCATGCAAGAAGCTCACTACAATGGCTTGTCGCTGGTGATCATTTGTGCTCAGGCTGATGCTGAAGAACATTGCATGCAGCTCAGAGGCAATGGACT
GTTAAGTTCAATTGAACCTGCTACTAGTGGTGGATGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
GCCCAGTTAACTTTCTATCACCAAAACGACGTCTTTTTAGTTCTCCTCTTTTCCCAGTCCCCCTTTCTGAAAACGAATCAGTCCACTCCCAATTTTTCATTTTCTCCATC
TTCAACTTTCAAATCTTTACAAGAATCAGAACAATTGATTCTTCAAATCGGAACAGATTTTCCGTTTCAGGTTGACGAGAAGAAAATCAATGGAGATTGCGATTTCTGGG
AAGTTAGCTCTCTCGCCCAACCCTGTCTTCAACCCCAAACCAGGGGACAGAAGTTCTGTGTGTAGAGGGCTATGCTCGAACTTAGGCGCATCGATTATTAAATCGGCCAC
AACAGCAGGTAGAGGAGGCGGGTTGTTGGAGAGGCCTGTTGTCGAGAAAGCTACTCCTGGAAGAGAATCTGAGTTTGATTTGAGGAGATCGAGGAAAATGACGCCACCAT
ACCGTGTCATCCTGCATAATGACGATTTCAATAAACGAGAATACGTCGTTCAAGTCCTGATGAAAGTCATCCCTGGAATGACGCTCGATAATGCAGTTAACATCATGCAA
GAAGCTCACTACAATGGCTTGTCGCTGGTGATCATTTGTGCTCAGGCTGATGCTGAAGAACATTGCATGCAGCTCAGAGGCAATGGACTGTTAAGTTCAATTGAACCTGC
TACTAGTGGTGGATGCTGCTAAAAGCCTTTTCATCACTGGATTGGATTATAGTTTTATATTGTAGTCAAGCTATAGTCTTTACAAACTTAAGGCATGAATATGGGTTGGG
ATTAAAAAAAAGAAGAAAATGAAATGAAACTGTTTTTGAAGTTAAGAAATCAAATAGATTAAATGAATATTTGTTTA
Protein sequenceShow/hide protein sequence
MEIAISGKLALSPNPVFNPKPGDRSSVCRGLCSNLGASIIKSATTAGRGGGLLERPVVEKATPGRESEFDLRRSRKMTPPYRVILHNDDFNKREYVVQVLMKVIPGMTLD
NAVNIMQEAHYNGLSLVIICAQADAEEHCMQLRGNGLLSSIEPATSGGCC