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Sed0019145 (gene) of Chayote v1 genome

Gene IDSed0019145
OrganismSechium edule (Chayote v1)
DescriptionB3 domain-containing protein
Genome locationLG10:4283875..4284923
RNA-Seq ExpressionSed0019145
SyntenySed0019145
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034345.1 hypothetical protein SDJN02_04072, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2754.97Show/hide
Query:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTHNPTTHH--------PKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDDDD-
        M  L++Y     KG YPPMSPRLSFS DFV++H+ T  H        P +S SD  DFEFSA  NP +   M AAD+LFF GKLLPTLRDELLL DDDD 
Subjt:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTHNPTTHH--------PKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDDDD-

Query:  -----MSPKASPPKWKHFFGLKRS-VDGRCTAA-----TSQGKIPKLALDD
               P    PKWK F  LKRS VDGRCT        +QGK+PKLAL D
Subjt:  -----MSPKASPPKWKHFFGLKRS-VDGRCTAA-----TSQGKIPKLALDD

TYK12894.1 uncharacterized protein E5676_scaffold255G004880 [Cucumis melo var. makuwa]1.4e-2754.55Show/hide
Query:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD
        M  L+TY      KGQ+PPMSPRLSFS DFV++ N   PT        PK+  +   S DFEFS   NP +   M AAD+LFF GKLLPTLRDELL+ DD
Subjt:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD

Query:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN
        +D++   PK+  PKWK F  LKRS VDGRCTA         +QGKIPKLAL DN
Subjt:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN

XP_008441107.1 PREDICTED: uncharacterized protein LOC103485334 [Cucumis melo]9.2e-2753.9Show/hide
Query:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD
        M  L+TY      KGQ+PPMSPRLSFS DFV++ N   PT        PK+  +   S DFEFS   NP +   M AAD+LFF GKLLPTL DELL+ DD
Subjt:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD

Query:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN
        +D++   PK+  PKWK F  LKRS VDGRCTA         +QGKIPKLAL DN
Subjt:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN

XP_023544728.1 uncharacterized protein LOC111804229 [Cucurbita pepo subsp. pepo]2.4e-2754.49Show/hide
Query:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTHNPT-----TH-------HPKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGD
        M  L++Y     KG YPPMSPRLSFS DFV++H+PT     TH        P +S SD  DFEFSA  NP +   M AAD+LFF GKLLPTLRDELLL D
Subjt:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTHNPT-----TH-------HPKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGD

Query:  DDD-------MSPKASPPKWKHFFGLKRS-VDGRCTAA-----TSQGKIPKLALDD
        DDD         P    PKWK F  LKRS VDGRCT        +QGK+PKLAL D
Subjt:  DDD-------MSPKASPPKWKHFFGLKRS-VDGRCTAA-----TSQGKIPKLALDD

XP_038882319.1 uncharacterized protein LOC120073563 [Benincasa hispida]1.1e-2754.61Show/hide
Query:  MGYLETY----TKGQYPPMSPRLSFSKDFVQ-THNPTTHH----------PKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD
        M  L+TY     KGQYPPMSPRLSFS DFV+ +H+P+  +          P    + S DFEFSA  NP +   M AAD+LFF GKLLPTLRDELLL DD
Subjt:  MGYLETY----TKGQYPPMSPRLSFSKDFVQ-THNPTTHH----------PKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD

Query:  DDMSPKASP---PKWKHFFGLKRS-VDGRCTA-----ATSQGKIPKLALDDN
        DD      P   P+WK F  LKRS VDGRCTA        QGKIPKL L DN
Subjt:  DDMSPKASP---PKWKHFFGLKRS-VDGRCTA-----ATSQGKIPKLALDDN

TrEMBL top hitse value%identityAlignment
A0A0A0KIB7 Uncharacterized protein9.9e-2753.55Show/hide
Query:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD
        M  L+TY      KGQ+PPMSPRLSFS DFV++ N   PT+       PK+  +   S DFEFS   NP +   M AAD+LFF GKLLPTLRDELL+ DD
Subjt:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD

Query:  DD----MSPKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN
        D+    + PK   PKWK F  LKRS VDGRCTA         +Q KIPKLAL DN
Subjt:  DD----MSPKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN

A0A1S3B2N0 uncharacterized protein LOC1034853344.5e-2753.9Show/hide
Query:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD
        M  L+TY      KGQ+PPMSPRLSFS DFV++ N   PT        PK+  +   S DFEFS   NP +   M AAD+LFF GKLLPTL DELL+ DD
Subjt:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD

Query:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN
        +D++   PK+  PKWK F  LKRS VDGRCTA         +QGKIPKLAL DN
Subjt:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN

A0A5D3CPD3 Uncharacterized protein6.9e-2854.55Show/hide
Query:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD
        M  L+TY      KGQ+PPMSPRLSFS DFV++ N   PT        PK+  +   S DFEFS   NP +   M AAD+LFF GKLLPTLRDELL+ DD
Subjt:  MGYLETY-----TKGQYPPMSPRLSFSKDFVQTHN---PTT-----HHPKM--SHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDD

Query:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN
        +D++   PK+  PKWK F  LKRS VDGRCTA         +QGKIPKLAL DN
Subjt:  DDMS---PKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDDN

A0A6J1GEJ6 uncharacterized protein LOC1114534529.9e-2753.85Show/hide
Query:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTH-----NPTTH-------HPKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGD
        M  L++Y     KG YPPMSPRLSFS DFV++H     N  TH        P +S SD  DFEFSA  NP +   M AAD+LFF GKLLPTLRDELLL D
Subjt:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTH-----NPTTH-------HPKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGD

Query:  DDD-------MSPKASPPKWKHFFGLKRS-VDGRCTAA-----TSQGKIPKLALDD
        DDD         P    PKWK F  LKRS VDGRCT        +QGK+PKLAL D
Subjt:  DDD-------MSPKASPPKWKHFFGLKRS-VDGRCTAA-----TSQGKIPKLALDD

A0A6J1IL61 uncharacterized protein LOC1114780329.9e-2752.26Show/hide
Query:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTHNPTTHHPKMSH--------SDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDDDD-
        M  L++Y     KG YPPMSPRLSFS DFV++H+ T  +  +S         S S DFEFSA  NP +   M AAD+LFF GKLLPTLRDELLL DDDD 
Subjt:  MGYLETY----TKGQYPPMSPRLSFSKDFVQTHNPTTHHPKMSH--------SDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDDDD-

Query:  -------MSPKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDD
                 P    PKWK F  LKRS VDGRCT          +QGK+PKLAL D
Subjt:  -------MSPKASPPKWKHFFGLKRS-VDGRCTAA-------TSQGKIPKLALDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66800.1 unknown protein2.4e-0934.53Show/hide
Query:  MGYLETYTK--GQYPPMSPRLSFSKDFVQTHNPTTHHPK---------MSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLP---------TLRDEL
        M  LE Y    G   PMSPR+SFS DFV+    TT   +          S S S +FEFS     +    M  AD+LF  GKLLP         TLR+EL
Subjt:  MGYLETYTK--GQYPPMSPRLSFSKDFVQTHNPTTHHPK---------MSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLP---------TLRDEL

Query:  LLGDDDDMSPKASPPKWKHFFGLKRSVDGRCTAATSQGK
        L+ +D++  P+ +     + F LK  +    ++++S  K
Subjt:  LLGDDDDMSPKASPPKWKHFFGLKRSVDGRCTAATSQGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTATTTGGAAACGTACACTAAGGGACAGTACCCTCCAATGAGCCCAAGACTGTCCTTCTCCAAGGACTTCGTCCAAACCCATAACCCCACAACTCATCATCCAAA
AATGAGCCACTCAGACTCGAAGGACTTCGAATTCTCCGCACCCATCAACCCCCTTGACCAACCGCCCATGGCCGCCGCCGACAAGCTCTTCTTCAACGGAAAATTGCTGC
CCACTCTCCGGGACGAGCTTCTCCTCGGCGACGATGACGACATGTCGCCCAAAGCCTCCCCCCCCAAATGGAAGCATTTTTTTGGCCTTAAGAGATCGGTCGATGGGCGC
TGCACTGCCGCTACTAGTCAAGGCAAAATCCCCAAATTAGCACTCGACGATAACCCCCAAATTCCCACTTCCCGATCTTTTGGAATCGAGAGACAGAGAAAAAAAAAAAA
GAGAATGAACACAAAAAGAGGAAAGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTATTTGGAAACGTACACTAAGGGACAGTACCCTCCAATGAGCCCAAGACTGTCCTTCTCCAAGGACTTCGTCCAAACCCATAACCCCACAACTCATCATCCAAA
AATGAGCCACTCAGACTCGAAGGACTTCGAATTCTCCGCACCCATCAACCCCCTTGACCAACCGCCCATGGCCGCCGCCGACAAGCTCTTCTTCAACGGAAAATTGCTGC
CCACTCTCCGGGACGAGCTTCTCCTCGGCGACGATGACGACATGTCGCCCAAAGCCTCCCCCCCCAAATGGAAGCATTTTTTTGGCCTTAAGAGATCGGTCGATGGGCGC
TGCACTGCCGCTACTAGTCAAGGCAAAATCCCCAAATTAGCACTCGACGATAACCCCCAAATTCCCACTTCCCGATCTTTTGGAATCGAGAGACAGAGAAAAAAAAAAAA
GAGAATGAACACAAAAAGAGGAAAGTATTAA
Protein sequenceShow/hide protein sequence
MGYLETYTKGQYPPMSPRLSFSKDFVQTHNPTTHHPKMSHSDSKDFEFSAPINPLDQPPMAAADKLFFNGKLLPTLRDELLLGDDDDMSPKASPPKWKHFFGLKRSVDGR
CTAATSQGKIPKLALDDNPQIPTSRSFGIERQRKKKKRMNTKRGKY