; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019167 (gene) of Chayote v1 genome

Gene IDSed0019167
OrganismSechium edule (Chayote v1)
Descriptionpumilio homolog 12-like
Genome locationLG07:9597747..9601141
RNA-Seq ExpressionSed0019167
SyntenySed0019167
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001313 - Pumilio RNA-binding repeat
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR033133 - Pumilio homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAG5112150.1 Oidioi.mRNA.OKI2018_I69.chr2.g6395.t1.cds [Oikopleura dioica]4.7e-1021.17Show/hide
Query:  LQRQWINRNDSDRNSSNNSIVTGADQ-VMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSEL
        +Q++    N SDR    N I++ + Q ++D   + ++      G    ++ ++   + + L   +Q     R  Q +       Q   ++ E  + +   
Subjt:  LQRQWINRNDSDRNSSNNSIVTGADQ-VMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSEL

Query:  AMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKR
             G   +Q VI        E I++     +  L  H  G   V+ +   C E Q   +++   + K ++ L+   + YGN +IQH+++       + 
Subjt:  AMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKR

Query:  IVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIV
        I+ A+MGR   L+ ++F S V+ KC+    ++E  +++EE   +   L  + +D F +YV+   L+     G     Q++V+ +   VS ++  +YG  +
Subjt:  IVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIV

Query:  IQKINEL
        + K+ ++
Subjt:  IQKINEL

CBY18164.1 unnamed protein product [Oikopleura dioica]1.4e-0921.17Show/hide
Query:  LQRQWINRNDSDRNSSNNSIVTGADQ-VMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSEL
        +Q++    N SDR    N I++ + Q ++D   + ++      G    ++ ++   + + L   +Q     R  Q +       Q   ++ E  + +   
Subjt:  LQRQWINRNDSDRNSSNNSIVTGADQ-VMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSEL

Query:  AMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKR
             G   +Q +I        E I++     +  L  H  G   V+ +   C E Q   +++   + K ++ L+   + YGN +IQH+++       + 
Subjt:  AMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKR

Query:  IVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIV
        I+ A+MGR   L+ ++F S V+ KC+    ++E   ++EE   S   L  + +D F +YV+   L+     G     Q++V+ +   VS ++  +YG  +
Subjt:  IVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIV

Query:  IQKINEL
        + K+ ++
Subjt:  IQKINEL

GFQ01610.1 putative pumilio homolog 8 chloroplastic [Phtheirospermum japonicum]7.3e-1130.41Show/hide
Query:  LMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELV
        L +H +G   +     +    Q + +LDS+    +    ++C++ YGN ++Q+V++ N   V  RI + L G+F  LA  + GS  V KC+    Q+ L+
Subjt:  LMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELV

Query:  SIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
        S++EE   S Q    LA+  FG+YV+  AL     +G I+ Y  LV ++      +   + G  VI+ IN+
Subjt:  SIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

XP_012093203.1 pumilio homolog 12 [Jatropha curcas]8.1e-1034.48Show/hide
Query:  VLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYV
        V + ++    N+ LV+  + YGN ++Q V+D NI      ++E L G F  L+MN++GS VV KCL+ C +    +I+EE  + S   + + +D FG+YV
Subjt:  VLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYV

Query:  LVCALEHVYYRGTIQH
        +  AL  +  +G + H
Subjt:  LVCALEHVYYRGTIQH

XP_022149262.1 pumilio homolog 12-like [Momordica charantia]1.4e-1726.01Show/hide
Query:  SNHNPNSSSSNYRGLPRSSTQP-LQRQWINRNDSDRNSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVST
        SN   N  +     LP S+  P L  Q  + +  D N   N+IV GA+  + S+      S    GN    + L  P  +  L          R  Q ST
Subjt:  SNHNPNSSSSNYRGLPRSSTQP-LQRQWINRNDSDRNSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVST

Query:  NRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVIC
          +   Q    L +  D VS  A++  GC +LQ  +  E +   ++ I+  V  DLPILM+H  GSAF + LF SCD+ Q++ +L SV++  E+ F+ +C
Subjt:  NRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVIC

Query:  NNYY------------------------------------------------------------------------------------------------
        ++YY                                                                                                
Subjt:  NNYY------------------------------------------------------------------------------------------------

Query:  ----------------GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCAL
                        GN ++Q  I + I  V + I E L GRF DL+ +  GS VV KCLR CE SE+  IVEE   +   +  + +D FG++V+  AL
Subjt:  ----------------GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCAL

Query:  EHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINELNRKS
        E ++ RG ++ Y  LVK I      + N  YG  V  KI +L+ ++
Subjt:  EHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINELNRKS

TrEMBL top hitse value%identityAlignment
A0A183BLU7 PUM-HD domain-containing protein6.0e-1123.83Show/hide
Query:  RFHQVSTNRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKEN
        RF +         +  +L+ E    V  LA+   GC  +++ + + D   +  I+  + A + +L +H  GS  +R +   C E Q   VL+ +      
Subjt:  RFHQVSTNRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKEN

Query:  DFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYR
        + L +  + YG+ +I+HVI+  +    + IV +L      L+++++GS V+   L +C + +   ++E+       L  L  D +G YV+   LEH    
Subjt:  DFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYR

Query:  GTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
        G  +  +R+V+++   ++ +    YG  VI+++ E
Subjt:  GTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

A0A183C2L7 Uncharacterized protein4.2e-1223.97Show/hide
Query:  NSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVI
        +SS+ S  +G      + R ++LN    R N I+  +L + +  +      Q+    RF Q         +  +L+ E    +  LA+   G   +Q+ +
Subjt:  NSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVI

Query:  AAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAM
         + D   +  I+  ++A + +L +H  GS  +R +   C E Q   VL+ +      + L +  + YG  +IQHV++  +    +RIV  L      L  
Subjt:  AAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAM

Query:  NQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
        +++GS V+   +++    +  SIV    +  + ++ L  D +G++V+   LEH    G  +  +R+V+ +   V  +  D YG+ VIQ + E
Subjt:  NQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

A0A183CID6 Uncharacterized protein2.3e-1025.29Show/hide
Query:  IPEQNRTLYGEIQETIAERFHQVSTNRT--------PNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAF
        +PE    +   +QE +         NR            Q + +L + HD +  L     G   ++ V        RE IL  +  D+  L +H  G+  
Subjt:  IPEQNRTLYGEIQETIAERFHQVSTNRT--------PNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAF

Query:  VRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSS
        +  +   C E Q   VL+ +     ++ L +  + YGN +IQHV++  +    +RI   L G     A ++FG +V+ KCL      +  ++++      
Subjt:  VRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSS

Query:  QQLIGLAR----DYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQ
         Q +  AR    D FGH+V    +E  +  GT     RLV A+   V  +    YG  VIQ
Subjt:  QQLIGLAR----DYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQ

A0A6J1D7G3 pumilio homolog 12-like6.7e-1826.01Show/hide
Query:  SNHNPNSSSSNYRGLPRSSTQP-LQRQWINRNDSDRNSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVST
        SN   N  +     LP S+  P L  Q  + +  D N   N+IV GA+  + S+      S    GN    + L  P  +  L          R  Q ST
Subjt:  SNHNPNSSSSNYRGLPRSSTQP-LQRQWINRNDSDRNSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVST

Query:  NRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVIC
          +   Q    L +  D VS  A++  GC +LQ  +  E +   ++ I+  V  DLPILM+H  GSAF + LF SCD+ Q++ +L SV++  E+ F+ +C
Subjt:  NRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAE-DGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVIC

Query:  NNYY------------------------------------------------------------------------------------------------
        ++YY                                                                                                
Subjt:  NNYY------------------------------------------------------------------------------------------------

Query:  ----------------GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCAL
                        GN ++Q  I + I  V + I E L GRF DL+ +  GS VV KCLR CE SE+  IVEE   +   +  + +D FG++V+  AL
Subjt:  ----------------GNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCAL

Query:  EHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINELNRKS
        E ++ RG ++ Y  LVK I      + N  YG  V  KI +L+ ++
Subjt:  EHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINELNRKS

E4X3G0 PUM-HD domain-containing protein6.7e-1021.17Show/hide
Query:  LQRQWINRNDSDRNSSNNSIVTGADQ-VMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSEL
        +Q++    N SDR    N I++ + Q ++D   + ++      G    ++ ++   + + L   +Q     R  Q +       Q   ++ E  + +   
Subjt:  LQRQWINRNDSDRNSSNNSIVTGADQ-VMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQETIAERFHQVSTNRTPNVQNQELLTEQHDRVSEL

Query:  AMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKR
             G   +Q +I        E I++     +  L  H  G   V+ +   C E Q   +++   + K ++ L+   + YGN +IQH+++       + 
Subjt:  AMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKR

Query:  IVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIV
        I+ A+MGR   L+ ++F S V+ KC+    ++E   ++EE   S   L  + +D F +YV+   L+     G     Q++V+ +   VS ++  +YG  +
Subjt:  IVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIV

Query:  IQKINEL
        + K+ ++
Subjt:  IQKINEL

SwissProt top hitse value%identityAlignment
O74438 Meiotic coiled-coil protein 22.3e-0724Show/hide
Query:  GSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEF
        GS  V+ +F +C E      ++ ++   +     I    +GN ++QH+++       KR+++AL+ R  + +++QF S V+ K +++  ++ +   +++ 
Subjt:  GSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEF

Query:  TN-----SSQQLIGLARDYFGHYVL
        TN     + Q LI +A D +G+Y++
Subjt:  TN-----SSQQLIGLARDYFGHYVL

Q09829 Pumilio domain-containing protein C4G8.03c2.2e-1023.89Show/hide
Query:  TPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNY
        T N Q   LL      ++ LA    G   LQ  IA       E +   +  +L  L  +  G   ++      +      +++S++       L++  N 
Subjt:  TPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNY

Query:  YGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQR-
        YGN L+QHV++ NI+  T+RI+E   G  C L++ +F S  + +C+R    S    +++EF  S   +  L  D + +YV+        +       Q+ 
Subjt:  YGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQR-

Query:  -LVKAIIFAVSKVQNDSYGTIVIQKI
         ++++I   + K+QN  +G  ++ K+
Subjt:  -LVKAIIFAVSKVQNDSYGTIVIQKI

Q10238 Meiotic PUF family protein 13.9e-0728.36Show/hide
Query:  VHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSI
        V  +GS  V+ +F +C E    T LD ++    N   +IC   +GN +IQH+I+   E   +RI+ +L+      + N++ S VV + LR C  +     
Subjt:  VHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSI

Query:  VEEFTNSSQQ-----LIGLARDYFGHYVLVCALE
        V+E T    +     L  +A + +G+Y++   L+
Subjt:  VEEFTNSSQQ-----LIGLARDYFGHYVLVCALE

Q9C5E7 Pumilio homolog 6, chloroplastic3.0e-0722.86Show/hide
Query:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL
        L +H  G   ++ L   C  +HQ   + + +L        V+  + YGN + QHV++       +RI   L G    L++++F S V+ KCL    + E 
Subjt:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL

Query:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
          I++E      S   L+ + +D +G+YV    ++ ++   T      L   +    S ++  +YG  ++ ++ +
Subjt:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

Q9FIE9 Putative pumilio homolog 166.7e-0728.85Show/hide
Query:  DSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLV
        D +L    N+ L++ N+ YGN ++QHV+       T+ I + L G   +L+  ++GS +V + L   +      +++     ++ LI LAR  +G++V+ 
Subjt:  DSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLV

Query:  CALE
         ALE
Subjt:  CALE

Arabidopsis top hitse value%identityAlignment
AT2G29190.1 pumilio 23.1e-0721.83Show/hide
Query:  QNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSC-DEHQMNTVLDSVLVRKENDFLVICNNYYGN
        Q  +++ E    V        G   +Q  I        E I++    ++  L  H  G   ++ +   C D    + V+D ++    +   ++  + YGN
Subjt:  QNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSC-DEHQMNTVLDSVLVRKENDFLVICNNYYGN

Query:  DLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEF---TNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQR-
         +IQHV++         I++ L G+   ++  +F S VV KCL      E   +V E    T+ ++ L  + +D F +YV+   LE      T    QR 
Subjt:  DLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEF---TNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQR-

Query:  -LVKAIIFAVSKVQNDSYGTIVIQKINEL
         ++  I   ++ ++  +YG  ++ ++ +L
Subjt:  -LVKAIIFAVSKVQNDSYGTIVIQKINEL

AT4G25880.1 pumilio 62.1e-0822.86Show/hide
Query:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL
        L +H  G   ++ L   C  +HQ   + + +L        V+  + YGN + QHV++       +RI   L G    L++++F S V+ KCL    + E 
Subjt:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL

Query:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
          I++E      S   L+ + +D +G+YV    ++ ++   T      L   +    S ++  +YG  ++ ++ +
Subjt:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

AT4G25880.2 pumilio 62.1e-0822.86Show/hide
Query:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL
        L +H  G   ++ L   C  +HQ   + + +L        V+  + YGN + QHV++       +RI   L G    L++++F S V+ KCL    + E 
Subjt:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL

Query:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
          I++E      S   L+ + +D +G+YV    ++ ++   T      L   +    S ++  +YG  ++ ++ +
Subjt:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

AT4G25880.3 pumilio 62.1e-0822.86Show/hide
Query:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL
        L +H  G   ++ L   C  +HQ   + + +L        V+  + YGN + QHV++       +RI   L G    L++++F S V+ KCL    + E 
Subjt:  LMVHNIGSAFVRALFLSCD-EHQMNTVLDSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSEL

Query:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE
          I++E      S   L+ + +D +G+YV    ++ ++   T      L   +    S ++  +YG  ++ ++ +
Subjt:  VSIVEEFT---NSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAVSKVQNDSYGTIVIQKINE

AT5G59280.1 pumilio 164.7e-0828.85Show/hide
Query:  DSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLV
        D +L    N+ L++ N+ YGN ++QHV+       T+ I + L G   +L+  ++GS +V + L   +      +++     ++ LI LAR  +G++V+ 
Subjt:  DSVLVRKENDFLVICNNYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLV

Query:  CALE
         ALE
Subjt:  CALE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACATCAACAGAACTATAATCAAAATCAAAATCAAAATCAAAATCAAAATGAGCAGAGATCTAATCACAATCCAAACTCCTCCTCCAGTAATTATCGAGGATTACC
TCGATCGTCGACGCAACCGCTCCAGAGACAATGGATCAACCGGAACGATTCAGATCGAAATTCAAGCAATAACAGCATCGTAACCGGAGCCGATCAGGTCATGGATTCAG
TGCGAGATCGAATGCTGAATTCACTTGCGATTCGAGGAAACCTCATCTCGCGACGCGATCTGTTGATTCCAGAGCAAAACCGAACGCTGTATGGCGAGATTCAAGAAACC
ATAGCCGAGCGATTCCATCAGGTTAGTACAAATCGAACGCCGAATGTTCAGAATCAAGAACTCCTAACCGAGCAACACGATCGCGTGTCGGAGTTGGCGATGACGACCGG
AGGATGCGAGTATCTCCAGAGTGTGATTGCGGCGGAGGACGGCGGAGTGAGAGAGGCGATTCTTGCGATAGTGGCGGCGGATCTTCCGATTCTGATGGTACATAACATCG
GATCTGCATTTGTGAGGGCGTTGTTCTTATCTTGCGATGAACACCAAATGAACACAGTTTTGGACTCGGTTTTGGTTCGAAAGGAAAACGACTTTCTTGTTATTTGCAAT
AATTACTACGGGAACGATTTGATTCAACATGTGATTGATGCAAACATTGAAGGTGTGACAAAACGCATAGTGGAAGCATTGATGGGGAGATTTTGTGACTTAGCAATGAA
TCAGTTTGGAAGCATTGTGGTGCATAAGTGCTTGAGGAACTGTGAACAAAGTGAACTTGTGAGCATTGTTGAAGAATTCACAAACTCATCTCAACAACTTATTGGTCTTG
CTCGAGATTATTTTGGACATTATGTTCTTGTATGTGCACTTGAGCACGTCTATTACCGAGGGACTATACAACATTATCAGAGATTGGTGAAAGCCATCATCTTTGCTGTT
TCAAAGGTCCAAAACGACTCATATGGGACAATAGTCATCCAAAAAATTAATGAACTTAATCGCAAGTCCCCCTTCCAATATCCACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACATCAACAGAACTATAATCAAAATCAAAATCAAAATCAAAATCAAAATGAGCAGAGATCTAATCACAATCCAAACTCCTCCTCCAGTAATTATCGAGGATTACC
TCGATCGTCGACGCAACCGCTCCAGAGACAATGGATCAACCGGAACGATTCAGATCGAAATTCAAGCAATAACAGCATCGTAACCGGAGCCGATCAGGTCATGGATTCAG
TGCGAGATCGAATGCTGAATTCACTTGCGATTCGAGGAAACCTCATCTCGCGACGCGATCTGTTGATTCCAGAGCAAAACCGAACGCTGTATGGCGAGATTCAAGAAACC
ATAGCCGAGCGATTCCATCAGGTTAGTACAAATCGAACGCCGAATGTTCAGAATCAAGAACTCCTAACCGAGCAACACGATCGCGTGTCGGAGTTGGCGATGACGACCGG
AGGATGCGAGTATCTCCAGAGTGTGATTGCGGCGGAGGACGGCGGAGTGAGAGAGGCGATTCTTGCGATAGTGGCGGCGGATCTTCCGATTCTGATGGTACATAACATCG
GATCTGCATTTGTGAGGGCGTTGTTCTTATCTTGCGATGAACACCAAATGAACACAGTTTTGGACTCGGTTTTGGTTCGAAAGGAAAACGACTTTCTTGTTATTTGCAAT
AATTACTACGGGAACGATTTGATTCAACATGTGATTGATGCAAACATTGAAGGTGTGACAAAACGCATAGTGGAAGCATTGATGGGGAGATTTTGTGACTTAGCAATGAA
TCAGTTTGGAAGCATTGTGGTGCATAAGTGCTTGAGGAACTGTGAACAAAGTGAACTTGTGAGCATTGTTGAAGAATTCACAAACTCATCTCAACAACTTATTGGTCTTG
CTCGAGATTATTTTGGACATTATGTTCTTGTATGTGCACTTGAGCACGTCTATTACCGAGGGACTATACAACATTATCAGAGATTGGTGAAAGCCATCATCTTTGCTGTT
TCAAAGGTCCAAAACGACTCATATGGGACAATAGTCATCCAAAAAATTAATGAACTTAATCGCAAGTCCCCCTTCCAATATCCACAGTGA
Protein sequenceShow/hide protein sequence
MEHQQNYNQNQNQNQNQNEQRSNHNPNSSSSNYRGLPRSSTQPLQRQWINRNDSDRNSSNNSIVTGADQVMDSVRDRMLNSLAIRGNLISRRDLLIPEQNRTLYGEIQET
IAERFHQVSTNRTPNVQNQELLTEQHDRVSELAMTTGGCEYLQSVIAAEDGGVREAILAIVAADLPILMVHNIGSAFVRALFLSCDEHQMNTVLDSVLVRKENDFLVICN
NYYGNDLIQHVIDANIEGVTKRIVEALMGRFCDLAMNQFGSIVVHKCLRNCEQSELVSIVEEFTNSSQQLIGLARDYFGHYVLVCALEHVYYRGTIQHYQRLVKAIIFAV
SKVQNDSYGTIVIQKINELNRKSPFQYPQ