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Sed0019170 (gene) of Chayote v1 genome

Gene IDSed0019170
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:6428495..6428689
RNA-Seq ExpressionSed0019170
SyntenySed0019170
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]3.0e-1679.66Show/hide
Query:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        L LLQ+QPN+AGR LHEK  MVR  E+ LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

KAG6582361.1 hypothetical protein SDJN03_22363, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1469.7Show/hide
Query:  IFLF-----LLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        +FLF     LL + PN+AGR LHE   MVR  E++LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  IFLF-----LLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1471.64Show/hide
Query:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVE----LKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        M   L LLQ+ PN AGR L EK  MVR RE+E    LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVE----LKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]6.0e-1777.78Show/hide
Query:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        M I L LLQ+QPN+AGR LHEK  MVR  E+ LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]3.0e-1679.66Show/hide
Query:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        L LLQ+QPN+AGR LHEK  MVR  E+ LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein2.9e-1777.78Show/hide
Query:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        M I L LLQ+QPN+AGR LHEK  MVR  E+ LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

A0A5A7U6N3 Putative transmembrane protein1.5e-1679.66Show/hide
Query:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        L LLQ+QPN+AGR LHEK  MVR  E+ LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

A0A5D3CZY7 Putative transmembrane protein1.5e-1679.66Show/hide
Query:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        L LLQ+QPN+AGR LHEK  MVR  E+ LKLQSLQRV VPPSGPSG TFIPGTNGPGCP
Subjt:  LFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

A0A5N6QYI5 Uncharacterized protein2.7e-0757.14Show/hide
Query:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        M++ LFLL VQ   A R LH         E +++LQSLQR DVPPSG SG T+IPGT GPGCP
Subjt:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

A0A5N6R1J5 Uncharacterized protein1.0e-0655.56Show/hide
Query:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP
        M++ LFLL VQ   A R LH         E +++LQSLQR +VPPSG SG T+IPGT GPGCP
Subjt:  MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATCTTTCTTTTTCTTTTGCAGGTTCAGCCAAACGTTGCTGGTAGGATTCTGCATGAGAAGGCATTAATGGTTAGAATAAGGGAGGTGGAGCTGAAGCTGCAGTC
GCTTCAGAGGGTTGACGTACCGCCCTCGGGCCCCTCCGGTTTGACCTTCATTCCCGGCACCAATGGCCCTGGCTGCCCCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCATCTTTCTTTTTCTTTTGCAGGTTCAGCCAAACGTTGCTGGTAGGATTCTGCATGAGAAGGCATTAATGGTTAGAATAAGGGAGGTGGAGCTGAAGCTGCAGTC
GCTTCAGAGGGTTGACGTACCGCCCTCGGGCCCCTCCGGTTTGACCTTCATTCCCGGCACCAATGGCCCTGGCTGCCCCCCTTAA
Protein sequenceShow/hide protein sequence
MVIFLFLLQVQPNVAGRILHEKALMVRIREVELKLQSLQRVDVPPSGPSGLTFIPGTNGPGCPP