CuGenDBv2

Gene ID	Sed0019209
Organism	Sechium edule (Chayote v1)
Description	Photosystem II protein D1
Genome location	Contig00297:193765..194820
RNA-Seq Expression	Sed0019209
Synteny	Sed0019209
Gene Ontology terms	GO:0009635 - response to herbicide (biological process) GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function) GO:0010242 - oxygen evolving activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000484 - Photosynthetic reaction centre, L/M IPR005867 - Photosystem II protein D1 IPR036854 - Photosystem II protein D1/D2 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

QXI84262.1 photosystem II protein D1 [Metagentiana gentilis]

1.2e-174

90.08

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

QXI89048.1 photosystem II protein D1 [Sinogentiana souliei]

2.1e-174

89.52

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRV+NTWADIINRANLGMEVMHERNAHNFPLDLAA+E+PSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

YP_009494858.1 photosystem II protein D1 [Gentiana caelestis]

1.2e-174

90.08

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

YP_009751886.1 photosystem II protein D1 [Cyclanthera pedata]

9.4e-175

90.37

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

YP_009972203.1 photosystem II protein D1 [Tripterospermum membranaceum]

1.6e-174

89.8

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRV+NTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

TrEMBL top hits

e value

%identity

Alignment

A0A5Q3A2Z8 Photosystem II protein D1

5.9e-175

90.08

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

A0A6C0W0Q9 Photosystem II protein D1

5.9e-175

90.08

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

A0A6H0ESP0 Photosystem II protein D1

4.5e-175

90.37

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

A0A7D7D807 Photosystem II protein D1

5.9e-175

90.08

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

A0A7S7AAC6 Photosystem II protein D1

5.9e-175

90.08

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

SwissProt top hits

e value

%identity

Alignment

A8SE40 Photosystem II protein D1

1.4e-176

89.8

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PS NG
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

P10510 Photosystem II protein D1

8.0e-177

89.8

Show/hide

Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

P12463 Photosystem II protein D1

8.0e-177

89.8

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Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

Q2QDA8 Photosystem II protein D1

4.7e-177

90.08

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Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

Q6ENJ7 Photosystem II protein D1

1.4e-176

89.52

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Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EVPS+NG
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

Arabidopsis top hits

e value

%identity

Alignment

ATCG00020.1 photosystem II reaction center protein A

3.7e-177

89.52

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Query:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
        MTAILERRES SLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Subjt:  MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA

Query:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-
        SVDEWLYNGGPYELI               WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFH+ 
Subjt:  SVDEWLYNGGPYELI---------------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-

Query:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF
                    AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF+   F
Subjt:  ------------AMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFS-KRF

Query:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING
        +FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PS NG
Subjt:  HFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

ATCG00270.1 photosystem II reaction center protein D

1.4e-22

26.28

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Query:  LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELI---------
        +++GW G+L+ P    A   +             G+    + S L G N ++ A+   + ++      +W          W   GG +  +         
Subjt:  LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELI---------

Query:  ------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-------------AMHGSLVTSSLI
              +EL+  + +RP+ A+A+S P+A   +VFLIYP+GQ  +      G++  F F++ FQ  HN  ++PFH+             A+HG+ V ++L 
Subjt:  ------WELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHI-------------AMHGSLVTSSLI

Query:  RETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFSKR
         E  +  +    +   Q EETY++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A + R
Subjt:  RETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFSKR

Sequences

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CDS sequence

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ATGACTGCAATTTTAGAGAGACGCGAAAGCGCAAGCCTATGGGGTCGTTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGAT
GATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATTGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACG
GAAACAATATTATTTCTGGTGCCATTATCCCTACTTCTGCAGCTATCGGGTTGCACTTTTACCCAATTTGGGAAGCTGCTTCCGTTGATGAATGGTTATACAATGGTGGT
CCTTATGAGCTAATTTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCC
AATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA
TTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTACAATATC
GTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT
CACCGCTTTAGGTATTAGCACCATGGCTTTCAGCAAACGGTTTCACTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACC
GTGCTAATCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAAGTTCCATCTATCAATGGATAA

mRNA sequence

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Protein sequence

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MTAILERRESASLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGG
PYELIWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHIAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNI
VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFSKRFHFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING

Sed0019209 (gene) of Chayote v1 genome