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Sed0019228 (gene) of Chayote v1 genome

Gene IDSed0019228
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG09:33318457..33325987
RNA-Seq ExpressionSed0019228
SyntenySed0019228
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136676.1 uncharacterized protein LOC111008328 [Momordica charantia]9.9e-0546.15Show/hide
Query:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQV-LKMTENEKQ
        +VWAYETIS+LS  VA  LND +IPR+L W  ++S +F +LE+++F  +     V L+ T+ E+Q
Subjt:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQV-LKMTENEKQ

XP_022156879.1 putative F-box protein At4g17565 [Momordica charantia]5.8e-0542.86Show/hide
Query:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF-ACMMDVKQVLKMTENEKQAIDAI
        KVW YETIS+LS+ VA  L+D  IPR+L W  ++S  F +L   +F      VK+ L++T+ ++Q +D I
Subjt:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF-ACMMDVKQVLKMTENEKQAIDAI

XP_022157020.1 uncharacterized protein LOC111023847 [Momordica charantia]9.9e-0538.55Show/hide
Query:  FKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSP---KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF
        + LKN + D +         D         Y  P   +VWAYETIS+LS  VA  LND +IPR+L W  ++S +F +LE+++F
Subjt:  FKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSP---KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF

TrEMBL top hitse value%identityAlignment
A0A6J1C463 uncharacterized protein LOC1110083284.8e-0546.15Show/hide
Query:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQV-LKMTENEKQ
        +VWAYETIS+LS  VA  LND +IPR+L W  ++S +F +LE+++F  +     V L+ T+ E+Q
Subjt:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQV-LKMTENEKQ

A0A6J1DRZ7 uncharacterized protein LOC1110238474.8e-0538.55Show/hide
Query:  FKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSP---KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF
        + LKN + D +         D         Y  P   +VWAYETIS+LS  VA  LND +IPR+L W  ++S +F +LE+++F
Subjt:  FKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSP---KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF

A0A6J1DUW8 putative F-box protein At4g175652.8e-0542.86Show/hide
Query:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF-ACMMDVKQVLKMTENEKQAIDAI
        KVW YETIS+LS+ VA  L+D  IPR+L W  ++S  F +L   +F      VK+ L++T+ ++Q +D I
Subjt:  KVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIF-ACMMDVKQVLKMTENEKQAIDAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACTTGAACTTTGCGAAAGATTTCAAGCTGAAGAACGAAGTGGTTGATACGATTGTTAGAACAACAAACTCAGAGCTGTATGATGGTGAAGTACCTGCCTTGAC
AGAAGGTTATTCTAGCCCTAAGGTTTGGGCATATGAAACTATATCATCTTTGAGTATTCATGTTGCCAAAATGTTAAATGATACTTCAATCCCACGCATTCTTCCGTGGT
TTTCTTCACACTCGCCTTCATTTGGGATTCTTGAAAAGAAGATTTTTGCATGCATGATGGATGTTAAACAAGTGCTCAAGATGACTGAAAATGAAAAGCAAGCCATTGAT
GCAATTAAGAGTTTGATATCTTCCCCACCTTTTTTTAGGCACAATATGGCTCATCAAGAAGAAATGGAGCATCTAGAAGTAGAGCCTAGAGAAGAACCCATTGTGGATGA
TGAGTCCTCTTCCTTTTATGGGAAGGATGAAACTCCCAAGAAAAAAAGGAGGATAAAACCAAAACATAAATTGAGGTTGAAGTTATTCAAGCATATTTACTTCAAGTGCA
CAAAGAAAACTAGGATAAAAGTTTTAGAAGATGACATGAAATGCCTAAAGGAGGACATGAAATGTCTAAAGGAGAACATGTTATCCACCCTCTTAAGTATGGAGAAGCAT
TTTCGTAAGGATCAGGAGGTGGATGATGAGCAAGATCTAGACCATATTCAGTTTGGTGGCTTAAACATCAATCCCTTAGAAGAGGTGAAAGAAGCAAATAACATTGGAGA
AACATTCATGGAAGGGCTAAATGAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACTTGAACTTTGCGAAAGATTTCAAGCTGAAGAACGAAGTGGTTGATACGATTGTTAGAACAACAAACTCAGAGCTGTATGATGGTGAAGTACCTGCCTTGAC
AGAAGGTTATTCTAGCCCTAAGGTTTGGGCATATGAAACTATATCATCTTTGAGTATTCATGTTGCCAAAATGTTAAATGATACTTCAATCCCACGCATTCTTCCGTGGT
TTTCTTCACACTCGCCTTCATTTGGGATTCTTGAAAAGAAGATTTTTGCATGCATGATGGATGTTAAACAAGTGCTCAAGATGACTGAAAATGAAAAGCAAGCCATTGAT
GCAATTAAGAGTTTGATATCTTCCCCACCTTTTTTTAGGCACAATATGGCTCATCAAGAAGAAATGGAGCATCTAGAAGTAGAGCCTAGAGAAGAACCCATTGTGGATGA
TGAGTCCTCTTCCTTTTATGGGAAGGATGAAACTCCCAAGAAAAAAAGGAGGATAAAACCAAAACATAAATTGAGGTTGAAGTTATTCAAGCATATTTACTTCAAGTGCA
CAAAGAAAACTAGGATAAAAGTTTTAGAAGATGACATGAAATGCCTAAAGGAGGACATGAAATGTCTAAAGGAGAACATGTTATCCACCCTCTTAAGTATGGAGAAGCAT
TTTCGTAAGGATCAGGAGGTGGATGATGAGCAAGATCTAGACCATATTCAGTTTGGTGGCTTAAACATCAATCCCTTAGAAGAGGTGAAAGAAGCAAATAACATTGGAGA
AACATTCATGGAAGGGCTAAATGAAACTTAA
Protein sequenceShow/hide protein sequence
MNNLNFAKDFKLKNEVVDTIVRTTNSELYDGEVPALTEGYSSPKVWAYETISSLSIHVAKMLNDTSIPRILPWFSSHSPSFGILEKKIFACMMDVKQVLKMTENEKQAID
AIKSLISSPPFFRHNMAHQEEMEHLEVEPREEPIVDDESSSFYGKDETPKKKRRIKPKHKLRLKLFKHIYFKCTKKTRIKVLEDDMKCLKEDMKCLKENMLSTLLSMEKH
FRKDQEVDDEQDLDHIQFGGLNINPLEEVKEANNIGETFMEGLNET