| GenBank top hits | e value | %identity | Alignment |
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| KAG6594716.1 DNA-directed RNA polymerases IV and V subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | 5.4e-98 | 80.89 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKSSA KD ASLKGKDD LSKSKKGRKVQFD+ GSVDA N S+KFSGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP SFDRG+QYAKRANHYVNTESVRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVFALVPSLKSKRSKL+EPLN+VLSELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| XP_022926857.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita moschata] | 8.6e-96 | 79.27 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKSSA KD ASLKGKDD LSKSKKGRKVQFD+ GSVDA N S+KFSGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIP SFDRG+QYAKRANHYVNTE VRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVF+LVPSLKSKRSKL+EPLN+VL ELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| XP_023003382.1 DNA-directed RNA polymerases IV and V subunit 4-like [Cucurbita maxima] | 1.1e-98 | 81.3 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKS A KD ASLKGKDD LSKSKKGRKVQFD+ GSVDAH N SMKF GKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP SFDRG+QYAKRANHYVNTESVRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDTIDEVFALVPSLKSKRSKL+EPLN+VLSELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| XP_023517145.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita pepo subsp. pepo] | 3.5e-97 | 80.49 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKSSA KD ASLKGKDD LSKSKKGRKVQFD+ GSVDA N S+KFSGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIE ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP SFDRG+QYAKRANHYVNTESVRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVFALVPSLKSKRSKL+EPLN+VLSELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| XP_023517147.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 [Cucurbita pepo subsp. pepo] | 9.5e-95 | 78.86 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKSSA KD GKDD LSKSKKGRKVQFD+ GSVDA N S+KFSGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIE ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP SFDRG+QYAKRANHYVNTESVRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVFALVPSLKSKRSKL+EPLN+VLSELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 3.7e-92 | 77.64 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGFSV K+P KSSLKSSA KD ASLKGKDD LSK KKGRKVQFD+ GSVDA FSMK+SGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG N KAS KEPQ LELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIP SFDRG+QYAKRANHYVN ESVRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVFAL+PSLK KRSKLSEP+N+VLSELAK+KSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 7.4e-93 | 77.64 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGFSV KKP KSSLKSSA KD ASLKGKDD LSK KKGRKVQFD+ GSVDA +FSMK+SGKNGD+GKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG N KAS KEPQ LELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIP SFDRG+QYAKRANHYVN ESVRPVLETLKKYG++DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVFAL+PSLK+KRSKLSEPLN+VLSELAK+KSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| A0A6J1EGC4 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 | 1.1e-93 | 77.64 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKSSA KD GKDD LSKSKKGRKVQFD+ GSVDA N S+KFSGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIP SFDRG+QYAKRANHYVNTE VRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVF+LVPSLKSKRSKL+EPLN+VL ELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| A0A6J1EJD9 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 | 4.2e-96 | 79.27 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKSSA KD ASLKGKDD LSKSKKGRKVQFD+ GSVDA N S+KFSGKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQM LLSADPTIKIP SFDRG+QYAKRANHYVNTE VRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDT DEVF+LVPSLKSKRSKL+EPLN+VL ELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 5.3e-99 | 81.3 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
MSEKGEKGF V KKPGKSSLKS A KD ASLKGKDD LSKSKKGRKVQFD+ GSVDAH N SMKF GKNGDLGKGG
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFDSPGSVDAHTNFSMKFSGKNGDLGKGG
Query: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
KG+NG KAS KE QPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIP SFDRG+QYAKRANHYVNTESVRPVLETLKKYGV+DSE
Subjt: KGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSE
Query: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
ICVIANV PDTIDEVFALVPSLKSKRSKL+EPLN+VLSELAKLKSS
Subjt: ICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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| SwissProt top hits | e value | %identity | Alignment |
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| O48890 DNA-directed RNA polymerase II subunit 4 | 7.5e-18 | 35.77 | Show/hide |
Query: SAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSEICVIANVS
S +E ELKI E +K +CLM+CE + +L+ +Q+ +S DP ++ F++ +QY KR + Y N ++VR V E L ++ +++ E+CV+ N+
Subjt: SAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSEICVIANVS
Query: PDTIDEVFALVPSLKSK-RSKLSEPLNHVLSELAKLK
P+T++E A+VPSLK+K R+ E + +L++L+ +K
Subjt: PDTIDEVFALVPSLKSK-RSKLSEPLNHVLSELAKLK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 7.3e-05 | 32.1 | Show/hide |
Query: SFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSEICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLK
+F + + YA++ + Y N S++ V L K + + EI +AN+ P+ DE +L+PSLK + L +L EL+ L+
Subjt: SFDRGMQYAKRANHYVNTESVRPVLETLKKYGVSDSEICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 1.0e-35 | 42.23 | Show/hide |
Query: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFD--SPGSVDAHTNFS---MKFSGKNGD
MSEKG KG KSSLKS KDG GKD +K KKGRK+ FD +P + N S F
Subjt: MSEKGEKGFSVPKKPGKSSLKSSAPKDGSCSFSFTLNLFAQCIYLFFLVCCIASLKGKDDGLSKSKKGRKVQFD--SPGSVDAHTNFS---MKFSGKNGD
Query: LGKGGKGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYG
GK K +K S ELK +LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR + Y + HY N +SVR VLE LK YG
Subjt: LGKGGKGVNGAKASAPKEPQPLELKIEQELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPASFDRGMQYAKRANHYVNTESVRPVLETLKKYG
Query: VSDSEICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
+SD E+CVIAN S +++DEV A +PSLK+K+ +++PL L EL+KLK S
Subjt: VSDSEICVIANVSPDTIDEVFALVPSLKSKRSKLSEPLNHVLSELAKLKSS
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