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Sed0019234 (gene) of Chayote v1 genome

Gene IDSed0019234
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationLG10:8353443..8353954
RNA-Seq ExpressionSed0019234
SyntenySed0019234
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647605.1 hypothetical protein Csa_003512 [Cucumis sativus]1.6e-4687.96Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLLQP ASFRHILKRCSSFGKR+N  NE D LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH+MGI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LT+MIKIR
Subjt:  LTAMIKIR

KAG6594782.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]5.7e-4483.33Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLL P  SFRHIL+RCSSFG R N +NED  LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH++GI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LTAMI IR
Subjt:  LTAMIKIR

XP_008440807.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]4.7e-4687.04Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLLQP ASFRHILKRCSSFGKR+N  NE D LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH+MGI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LT+MIK R
Subjt:  LTAMIKIR

XP_022962631.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]5.7e-4483.33Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLL P  SFRHIL+RCSSFG R N +NED  LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH++GI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LTAMI IR
Subjt:  LTAMIKIR

XP_038883315.1 auxin-responsive protein SAUR50 [Benincasa hispida]1.0e-4587.04Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLLQP ASF+HILKRCSSFGKRSN  NE D LP DVPKGHF VYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGF+H+MGI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LTAMIKIR
Subjt:  LTAMIKIR

TrEMBL top hitse value%identityAlignment
A0A1S3B1Z6 auxin-induced protein 15A2.3e-4687.04Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLLQP ASFRHILKRCSSFGKR+N  NE D LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH+MGI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LT+MIK R
Subjt:  LTAMIKIR

A0A5D3CM97 Auxin-induced protein 15A2.3e-4687.04Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLLQP ASFRHILKRCSSFGKR+N  NE D LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH+MGI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LT+MIK R
Subjt:  LTAMIKIR

A0A6J1BXR8 auxin-responsive protein SAUR501.8e-4381.48Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I++ANLLQP ASFRHI+KRCSSFGKR+     +DSLP DVPKGHFAVYVG+NRSRYIVPISWL HPQFQSLLQ AEEEFGF+H+MG+ IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LTAMIKIR
Subjt:  LTAMIKIR

A0A6J1HDS8 auxin-responsive protein SAUR50-like2.8e-4483.33Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLL P  SFRHIL+RCSSFG R N +NED  LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH++GI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LTAMI IR
Subjt:  LTAMIKIR

A0A6J1KQN6 auxin-responsive protein SAUR50-like2.8e-4483.33Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M I+KANLL P  SFRHIL+RCSSFG R N +NED  LP DVPKGHFAVYVG+NRSRYIVPISWLAHPQFQSLLQRAEEEFGFNH++GI IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMIKIR
        LTAMI IR
Subjt:  LTAMIKIR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.1e-3463.46Show/hide
Query:  IRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLT
        ++K + L   A  + ILKRCSS GK++    ++D LP DVPKGHF VYVG+NRSRYIVPIS+L HP+FQSLLQRAEEEFGF+H+MG+ IPC+E+VF++LT
Subjt:  IRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLT

Query:  AMIK
        +MI+
Subjt:  AMIK

P0DKL1 Auxin-responsive protein SAUR507.6e-3162.14Show/hide
Query:  IRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLT
        IRK++      + + I+K+CSSFGK     N+D  LP+DVPKGHF VYVG+ R+RYIVPIS L HP FQ LLQR+EEEFGFNH+MGIIIPC+EV F S  
Subjt:  IRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLT

Query:  AMI
        +MI
Subjt:  AMI

P32295 Indole-3-acetic acid-induced protein ARG71.5e-1545.35Show/hide
Query:  RCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEM-GIIIPCEEVVFRSLTAMI
        R     K  +  NE  S   D PKG+ AVYVG+N  R+++P+S L  P FQ LL +AEEEFG++H M G+ IPC E +F+ +T+ +
Subjt:  RCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEM-GIIIPCEEVVFRSLTAMI

P33080 Auxin-induced protein X10A4.4e-1545.24Show/hide
Query:  RCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEM-GIIIPCEEVVFRSLTA
        R     K S   N+  S   +VPKG+  VYVGD   R+++P+S+L  P FQ LL +AEEEFG++H M G+ IPC+E  F ++T+
Subjt:  RCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEM-GIIIPCEEVVFRSLTA

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 108.9e-3264.29Show/hide
Query:  ASFRHILKRCSSFGKRSNV----FNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLTAMIK
        AS + I+KRCSS  K  NV    +N++D LP DVPKGHF VYVG NRSRYIVPISWL H +FQ+LL+ AEEEFGF+H+MG+ IPC+EV FRSL +M +
Subjt:  ASFRHILKRCSSFGKRSNV----FNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLTAMIK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family4.0e-3563.89Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKR-SNVFNEDDS-LPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVF
        M ++KAN L   A  + ILKRCSS GK+ SNV+ ED++  P +VPKGHF VYVG+NR RY+VPIS+L  P+FQ LLQ+AEEEFGF+H+MG+ IPCEEVVF
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKR-SNVFNEDDS-LPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVF

Query:  RSLTAMIK
        RSLT+M++
Subjt:  RSLTAMIK

AT2G18010.1 SAUR-like auxin-responsive protein family6.3e-3364.29Show/hide
Query:  ASFRHILKRCSSFGKRSNV----FNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLTAMIK
        AS + I+KRCSS  K  NV    +N++D LP DVPKGHF VYVG NRSRYIVPISWL H +FQ+LL+ AEEEFGF+H+MG+ IPC+EV FRSL +M +
Subjt:  ASFRHILKRCSSFGKRSNV----FNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLTAMIK

AT2G21220.1 SAUR-like auxin-responsive protein family8.8e-3564.76Show/hide
Query:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS
        M +++++ L   A  + ILKRCSS  K  N   ++D LP DVPKGHF VYVG+ RSRYIVPIS+L HP+F+SLLQ+AEEEFGFNH+MG+ IPCEEVVFRS
Subjt:  MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRS

Query:  LTAMI
        LT+MI
Subjt:  LTAMI

AT4G34760.1 SAUR-like auxin-responsive protein family8.0e-3663.46Show/hide
Query:  IRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLT
        ++K + L   A  + ILKRCSS GK++    ++D LP DVPKGHF VYVG+NRSRYIVPIS+L HP+FQSLLQRAEEEFGF+H+MG+ IPC+E+VF++LT
Subjt:  IRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLT

Query:  AMIK
        +MI+
Subjt:  AMIK

AT4G36110.1 SAUR-like auxin-responsive protein family2.4e-3262.04Show/hide
Query:  MPIRKAN--LLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVF
        M I+K+N   L   AS + ILKRCSS GK+    N+ +   +DVPKGHF VYVG +RSRY+VPISWL H +FQSLLQ AEEEFGF HEMG+ IPC+EVVF
Subjt:  MPIRKAN--LLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVF

Query:  RSLTAMIK
        RSL +M +
Subjt:  RSLTAMIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATCAGGAAGGCTAATCTACTTCAGCCACCAGCCTCCTTCAGACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAACGTCTTCAACGAAGACGACAG
CCTCCCCAGCGACGTCCCGAAAGGCCACTTCGCCGTCTATGTCGGAGACAACCGAAGCCGATACATCGTGCCGATATCGTGGCTGGCTCATCCGCAGTTCCAGAGCCTGC
TGCAGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGAAATGGGAATCATTATCCCTTGCGAAGAGGTCGTTTTTCGATCCTTAACGGCCATGATCAAGATCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTATCAGGAAGGCTAATCTACTTCAGCCACCAGCCTCCTTCAGACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAACGTCTTCAACGAAGACGACAG
CCTCCCCAGCGACGTCCCGAAAGGCCACTTCGCCGTCTATGTCGGAGACAACCGAAGCCGATACATCGTGCCGATATCGTGGCTGGCTCATCCGCAGTTCCAGAGCCTGC
TGCAGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGAAATGGGAATCATTATCCCTTGCGAAGAGGTCGTTTTTCGATCCTTAACGGCCATGATCAAGATCAGATGATAA
ACACAGTGGATTCCTTTTTTTTTTCTTCTTCTTCTTCTCAAATTGGTGTTTGGATATTAATTGGAGAAAGGAGTTGGAAGGAGCCAAATTTGCCCTCCTCCTGTCTACGT
ATAATCTTCGAACCATGTCGATATATATTCTATATTGACTATTTTTAAGTGTCGTAGATCATTAAAACTGTG
Protein sequenceShow/hide protein sequence
MPIRKANLLQPPASFRHILKRCSSFGKRSNVFNEDDSLPSDVPKGHFAVYVGDNRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHEMGIIIPCEEVVFRSLTAMIKIR