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Sed0019249 (gene) of Chayote v1 genome

Gene IDSed0019249
OrganismSechium edule (Chayote v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationLG05:33325875..33326251
RNA-Seq ExpressionSed0019249
SyntenySed0019249
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3270.19Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL
        MKL  ENLTGSLFY EV+D ATV DLR+ ISSQ+ LPSDRL+F+P  + GR IS  DD  SLVDFG+RDGS IY+FF PLDD+  DDLDAR+LFF CPDL
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]2.7e-3069.16Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISS---QEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFT-
        MKL ++NLTGSLF+ EVEDDATV DLR+ I++   Q  LPS RLIFIP  NP R IS+ DD ISLVDFG+RDGSHIYIFF PL DDDGDD++AR+ FFT 
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISS---QEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]5.5e-2862.61Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEK--LPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDD-----GDDLD----
        MKLA+ENLTGSLF+ +V+DDATV DL++ IS+     LPSDRLIFI  DNPGRPIS+ DD  SLVD GV+DGSHIYIFF+PLD +D     GDD D    
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEK--LPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDD-----GDDLD----

Query:  ARKLFFTCPDLLLFE
        +R  FFTC ++LLF+
Subjt:  ARKLFFTCPDLLLFE

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]4.8e-3269.23Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL
        MKL  ENLTGSLFY EV+D ATV DLR+ ISSQ+ LPSDRL+F+P  + GR IS  DD  SLVDFG+RDGS IY+FF PLD++  DDLDAR+LFF CPDL
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]3.0e-3473.08Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL
        MKL  ENLTGSLFY EV+D ATV DLR+ ISSQ+ LPSDRL+F+P  + GR IS  DD ISLVDFG+RDGS IYIFF PLDDD GDD+DAR+LFF CPDL
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein1.3e-3069.16Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISS---QEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFT-
        MKL ++NLTGSLF+ EVEDDATV DLR+ I++   Q  LPS RLIFIP  NP R IS+ DD ISLVDFG+RDGSHIYIFF PL DDDGDD++AR+ FFT 
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISS---QEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFT-

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

A0A2P5F648 Ubiquitin domain containing protein2.3e-1955.56Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPD
        MK+ +ENLTG+LFY +V +DATV DL+  I +QEKLPSDRLI I   N  RPI+      SLVD GV DGSHIY+FF PLDD       +    FT PD
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPD

A0A6J1C3E5 uncharacterized protein LOC1110078942.7e-2862.61Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEK--LPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDD-----GDDLD----
        MKLA+ENLTGSLF+ +V+DDATV DL++ IS+     LPSDRLIFI  DNPGRPIS+ DD  SLVD GV+DGSHIYIFF+PLD +D     GDD D    
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEK--LPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDD-----GDDLD----

Query:  ARKLFFTCPDLLLFE
        +R  FFTC ++LLF+
Subjt:  ARKLFFTCPDLLLFE

A0A6J1ERN4 uncharacterized protein LOC1114370932.3e-3269.23Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL
        MKL  ENLTGSLFY EV+D ATV DLR+ ISSQ+ LPSDRL+F+P  + GR IS  DD  SLVDFG+RDGS IY+FF PLD++  DDLDAR+LFF CPDL
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

A0A6J1JPI4 uncharacterized protein LOC1114865611.5e-3473.08Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL
        MKL  ENLTGSLFY EV+D ATV DLR+ ISSQ+ LPSDRL+F+P  + GR IS  DD ISLVDFG+RDGS IYIFF PLDDD GDD+DAR+LFF CPDL
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDL

Query:  LLFE
        LLF+
Subjt:  LLFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein9.5e-1039.74Show/hide
Query:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRP-ISECDDQISLVDFGVRDGSHIYIFF
        MK+++E +TG+    +V +DATV  ++  I+ + KLP  RLI +  D   R  + E +D + L D GV + SHIY+FF
Subjt:  MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRP-ISECDDQISLVDFGVRDGSHIYIFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTAGCGATCGAAAACTTGACTGGTTCTCTGTTCTACGCTGAGGTTGAAGACGATGCCACGGTGTTTGATCTTAGAAGTTCGATCAGTTCCCAAGAGAAGCTCCC
TTCTGACCGTCTGATCTTCATTCCGGCTGACAATCCTGGCCGTCCGATCTCTGAGTGCGATGACCAAATCTCGCTCGTTGATTTTGGGGTCCGGGATGGGTCCCACATCT
ACATCTTTTTCTATCCGTTGGATGACGATGATGGCGATGATCTTGATGCCCGGAAGCTCTTCTTTACCTGTCCTGACCTTCTTCTCTTCGAGTAG
mRNA sequenceShow/hide mRNA sequence
TCTTAATTTTAAAAAACTTAAAAAAAAACGACAATGAAATTAGCGATCGAAAACTTGACTGGTTCTCTGTTCTACGCTGAGGTTGAAGACGATGCCACGGTGTTTGATCT
TAGAAGTTCGATCAGTTCCCAAGAGAAGCTCCCTTCTGACCGTCTGATCTTCATTCCGGCTGACAATCCTGGCCGTCCGATCTCTGAGTGCGATGACCAAATCTCGCTCG
TTGATTTTGGGGTCCGGGATGGGTCCCACATCTACATCTTTTTCTATCCGTTGGATGACGATGATGGCGATGATCTTGATGCCCGGAAGCTCTTCTTTACCTGTCCTGAC
CTTCTTCTCTTCGAGTAGCCGCTTATGGAGTTTTGAGCAAAATTAGG
Protein sequenceShow/hide protein sequence
MKLAIENLTGSLFYAEVEDDATVFDLRSSISSQEKLPSDRLIFIPADNPGRPISECDDQISLVDFGVRDGSHIYIFFYPLDDDDGDDLDARKLFFTCPDLLLFE