; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019252 (gene) of Chayote v1 genome

Gene IDSed0019252
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:14484883..14485599
RNA-Seq ExpressionSed0019252
SyntenySed0019252
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052904.1 hypothetical protein E6C27_scaffold344G00100 [Cucumis melo var. makuwa]1.2e-1654.47Show/hide
Query:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI
        M+ ITY+R++ R R    GFRL SRR SVSKL+ KF WL  IL     ++ R++  I KR  S+  S ++ A     RLRSFRRSNSFYAEAIADCLDFI
Subjt:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI

Query:  KRSSSSASLSADRPPSQ-PTVQF
        K SSSS S     PPS  PT  F
Subjt:  KRSSSSASLSADRPPSQ-PTVQF

KAE8637405.1 hypothetical protein CSA_023382 [Cucumis sativus]7.1e-1754.47Show/hide
Query:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI
        M+ ITY+R+  R+R    GFRL SRR SVSKLR KF WL  IL R R    R++  I K  TS+  S ++AA     +LRSFRRSNSFYAEAIADCLDFI
Subjt:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI

Query:  KRSSSSASLSADRPPSQ-PTVQF
        K +SS ++     PPS  PT  F
Subjt:  KRSSSSASLSADRPPSQ-PTVQF

KAG6596289.1 hypothetical protein SDJN03_09469, partial [Cucurbita argyrosperma subsp. sororia]9.9e-2759.71Show/hide
Query:  MEAITYQRMKPRRRSHG----TGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAA-------DRGECRLRSFRRSNSFY
        ME ITYQR+  RRRSHG     GF L+SRRFSVSKLR KF WL  IL R RR YS ++     RR   + + +TA+       DRGECRLRSFRRSNSFY
Subjt:  MEAITYQRMKPRRRSHG----TGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAA-------DRGECRLRSFRRSNSFY

Query:  AEAIADCLDFIKRSSSSASLSADRPPSQPTVQFLHPSST
        AEAIADCLDFIKRS    S+S+DR  SQP V+F  PS++
Subjt:  AEAIADCLDFIKRSSSSASLSADRPPSQPTVQFLHPSST

KAG7027838.1 hypothetical protein SDJN02_09015, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-2759.71Show/hide
Query:  MEAITYQRMKPRRRSHG----TGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAA-------DRGECRLRSFRRSNSFY
        ME ITYQR+  RRRSHG     GF L+SRRFSVSKLR KF WL  IL R RR YS ++     RR   + + +TA+       DRGECRLRSFRRSNSFY
Subjt:  MEAITYQRMKPRRRSHG----TGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAA-------DRGECRLRSFRRSNSFY

Query:  AEAIADCLDFIKRSSSSASLSADRPPSQPTVQFLHPSST
        AEAIADCLDFIKRS    S+S+DR  SQP V+F  PS++
Subjt:  AEAIADCLDFIKRSSSSASLSADRPPSQPTVQFLHPSST

XP_022158286.1 uncharacterized protein LOC111024807 [Momordica charantia]1.6e-1653.38Show/hide
Query:  MEAITYQRM----KPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGEC--RLRSFRRSNSFYAEAIA
        ME I+Y+R+      RR     GFRLNSRRFSVS+LR KF+ L  IL + RR       SI K R S A      A+   C  RLRSFRRSNSFYAEA+A
Subjt:  MEAITYQRM----KPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGEC--RLRSFRRSNSFYAEAIA

Query:  DCLDFIK-RSSSSASLSADRPPSQPTVQFLHPS
        DCLDFIK  +SSS S++ D    QP V+F HPS
Subjt:  DCLDFIK-RSSSSASLSADRPPSQPTVQFLHPS

TrEMBL top hitse value%identityAlignment
A0A0A0L3I7 Uncharacterized protein3.4e-1754.47Show/hide
Query:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI
        M+ ITY+R+  R+R    GFRL SRR SVSKLR KF WL  IL R R    R++  I K  TS+  S ++AA     +LRSFRRSNSFYAEAIADCLDFI
Subjt:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI

Query:  KRSSSSASLSADRPPSQ-PTVQF
        K +SS ++     PPS  PT  F
Subjt:  KRSSSSASLSADRPPSQ-PTVQF

A0A2N9J454 Uncharacterized protein6.1e-1450.45Show/hide
Query:  RRSHG-TGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINK------RRTSTASSRSTAAD----------RGECRLRSFRRSNSFYAEAIAD
        RR +G  GFRLN RRFSV +LR +F+ LF +L  CR  Y + L S+ K      RR++   + ST+            + +CRLRSF RSNSFYAEAIAD
Subjt:  RRSHG-TGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINK------RRTSTASSRSTAAD----------RGECRLRSFRRSNSFYAEAIAD

Query:  CLDFIKRSSSS
        CL+FIKRSS S
Subjt:  CLDFIKRSSSS

A0A5A7UC85 Uncharacterized protein5.8e-1754.47Show/hide
Query:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI
        M+ ITY+R++ R R    GFRL SRR SVSKL+ KF WL  IL     ++ R++  I KR  S+  S ++ A     RLRSFRRSNSFYAEAIADCLDFI
Subjt:  MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFI

Query:  KRSSSSASLSADRPPSQ-PTVQF
        K SSSS S     PPS  PT  F
Subjt:  KRSSSSASLSADRPPSQ-PTVQF

A0A6J1E0I4 uncharacterized protein LOC1110248077.6e-1753.38Show/hide
Query:  MEAITYQRM----KPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGEC--RLRSFRRSNSFYAEAIA
        ME I+Y+R+      RR     GFRLNSRRFSVS+LR KF+ L  IL + RR       SI K R S A      A+   C  RLRSFRRSNSFYAEA+A
Subjt:  MEAITYQRM----KPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGEC--RLRSFRRSNSFYAEAIA

Query:  DCLDFIK-RSSSSASLSADRPPSQPTVQFLHPS
        DCLDFIK  +SSS S++ D    QP V+F HPS
Subjt:  DCLDFIK-RSSSSASLSADRPPSQPTVQFLHPS

B9SRA4 Uncharacterized protein3.0e-1348.57Show/hide
Query:  RRSH---GTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKR-------RTSTASSRSTAAD-RGECRLRSFRRSNSFYAEAIADCLDFIK
        RR H   G GFRLN +RFSV +LR +FV+LF +L+R +  Y   + S+ +        + +T+S RS   +   +CR+R+F RSNSFY+EAIADCL+FIK
Subjt:  RRSH---GTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKR-------RTSTASSRSTAAD-RGECRLRSFRRSNSFYAEAIADCLDFIK

Query:  RSSSS
        RSS S
Subjt:  RSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGATCACATACCAGAGGATGAAGCCCCGGCGGCGGTCCCACGGCACCGGCTTCCGCCTCAACTCGAGAAGATTCAGCGTCTCCAAGCTGCGGCCCAAGTTCGT
GTGGCTCTTCACCATCTTAACCCGATGCCGCCGCTTCTATTCCCGGACCTTGAGCTCCATCAACAAGCGCCGGACATCCACTGCTTCTTCGAGATCCACCGCCGCCGATC
GAGGCGAGTGCAGGCTCAGATCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGACTGCTTGGATTTCATCAAGAGATCATCATCATCCGCCTCTCTTTCT
GCTGATCGCCCGCCCAGTCAACCCACCGTTCAATTTCTTCACCCTTCTTCTACCTAA
mRNA sequenceShow/hide mRNA sequence
GTCAATTGTTATATAATTAATTATTTAATAATTTATAAATAATTATATTTAGACATTCATTTAAAGTATTTAAAATGGGATATATTTGTTTAATAATTATTAAAAAAAAA
ATAGACATTTTTCGTAGTTGTCCTATTTTGTGAATTTCCCACGACTTTCGATTGGGCATATAAATAAAGAAAAAAATTTGCGGTGTGGAGTTGAGTTTCAAGTTTCAGCC
ATTTCAAACCAAAAATGGAGGCGATCACATACCAGAGGATGAAGCCCCGGCGGCGGTCCCACGGCACCGGCTTCCGCCTCAACTCGAGAAGATTCAGCGTCTCCAAGCTG
CGGCCCAAGTTCGTGTGGCTCTTCACCATCTTAACCCGATGCCGCCGCTTCTATTCCCGGACCTTGAGCTCCATCAACAAGCGCCGGACATCCACTGCTTCTTCGAGATC
CACCGCCGCCGATCGAGGCGAGTGCAGGCTCAGATCCTTCCGCCGCTCCAACTCTTTCTACGCCGAAGCCATTGCCGACTGCTTGGATTTCATCAAGAGATCATCATCAT
CCGCCTCTCTTTCTGCTGATCGCCCGCCCAGTCAACCCACCGTTCAATTTCTTCACCCTTCTTCTACCTAACATTTTGTTTATAAAAAAACATTGTTCATAAATATTTCT
CTTTCCTATTATATTTGTTGTTGTTTTGTTTGTTTGTCTGTAAGATTCAAAATGGCA
Protein sequenceShow/hide protein sequence
MEAITYQRMKPRRRSHGTGFRLNSRRFSVSKLRPKFVWLFTILTRCRRFYSRTLSSINKRRTSTASSRSTAADRGECRLRSFRRSNSFYAEAIADCLDFIKRSSSSASLS
ADRPPSQPTVQFLHPSST