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Sed0019282 (gene) of Chayote v1 genome

Gene IDSed0019282
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:31000795..31001358
RNA-Seq ExpressionSed0019282
SyntenySed0019282
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV66766.1 hypothetical protein CFOL_v3_10276 [Cephalotus follicularis]7.7e-0740Show/hide
Query:  LLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCT--LSEVENGAGASGASAFPGMNVDGFAAASMVNQTQKEDPSLS
        ++LC   + A R L GE+WL   E+  +  ++ R PV PSG NPC++IP +G GRCT  +    +      + AFP   V   AA+S+ N+TQK D S S
Subjt:  LLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCT--LSEVENGAGASGASAFPGMNVDGFAAASMVNQTQKEDPSLS

KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]1.2e-2056.52Show/hide
Query:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA
        MAF +++T  AF  + L +F+VS  R L G R         + +A+LR PVP S RNPCSFIP    GRCTLSEV++GA +   G+SAFPG+N DGFAAA
Subjt:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA

Query:  SMVNQTQKEDPSLSS
        SMVNQTQK+D SLSS
Subjt:  SMVNQTQKEDPSLSS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3068.1Show/hide
Query:  MAFYVMRT-AAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVEN----GAGASGASAFPGMNVDGF
        M F VM+T AAAF  +LLC+F+VSAARVLTGERW PV +R      MLR  VPPSGRNPCSFIP  G GRCTLSEVE+    G G  G+SAFPGMN DGF
Subjt:  MAFYVMRT-AAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVEN----GAGASGASAFPGMNVDGF

Query:  AAASMVNQTQKEDPSL
        +AA+MVN TQK+DPSL
Subjt:  AAASMVNQTQKEDPSL

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2165.22Show/hide
Query:  VSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAASMVNQTQKEDPSL
        +SAARV+TGERWLP P    + MAMLR  VP S RNPCSFIP    GRCTLSE ++GA A   G+SA  G+N DGFAAASM N+TQK+DPSL
Subjt:  VSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAASMVNQTQKEDPSL

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]4.0e-2460Show/hide
Query:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA
        MAF +M+T  AF  + L + ++SAARVL GERWLP    + +  AMLR PVP S RNPCSFIP    GRCTLSEV+ G  +   G+SAFPG+N DGFAAA
Subjt:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA

Query:  SMVNQTQKEDPSLSS
        S+VNQTQK+D S+SS
Subjt:  SMVNQTQKEDPSLSS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein2.0e-2460Show/hide
Query:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA
        MAF +M+T  AF  + L + ++SAARVL GERWLP    + +  AMLR PVP S RNPCSFIP    GRCTLSEV+ G  +   G+SAFPG+N DGFAAA
Subjt:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA

Query:  SMVNQTQKEDPSLSS
        S+VNQTQK+D S+SS
Subjt:  SMVNQTQKEDPSLSS

A0A1Q3BFG1 Uncharacterized protein3.7e-0740Show/hide
Query:  LLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCT--LSEVENGAGASGASAFPGMNVDGFAAASMVNQTQKEDPSLS
        ++LC   + A R L GE+WL   E+  +  ++ R PV PSG NPC++IP +G GRCT  +    +      + AFP   V   AA+S+ N+TQK D S S
Subjt:  LLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCT--LSEVENGAGASGASAFPGMNVDGFAAASMVNQTQKEDPSLS

A0A5A7VCY2 Uncharacterized protein5.9e-2156.52Show/hide
Query:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA
        MAF +++T  AF  + L +F+VS  R L G R         + +A+LR PVP S RNPCSFIP    GRCTLSEV++GA +   G+SAFPG+N DGFAAA
Subjt:  MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGA--SGASAFPGMNVDGFAAA

Query:  SMVNQTQKEDPSLSS
        SMVNQTQK+D SLSS
Subjt:  SMVNQTQKEDPSLSS

A0A5B6Z7Q1 Uncharacterized protein (Fragment)2.8e-0744.12Show/hide
Query:  LLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVE-NGAGA------SGASAFPGMNVDGFAAASMVNQTQKED
        +LC   +SA R L  E+WL   ++     ++ R PVP SG NPC++IP +G GRCTL+E E N AG       +  +AFP   V  FAAAS  N T+K+D
Subjt:  LLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVE-NGAGA------SGASAFPGMNVDGFAAASMVNQTQKED

Query:  PS
         S
Subjt:  PS

A0A6A4KR04 Uncharacterized protein (Fragment)3.1e-0641.38Show/hide
Query:  MAFYVMRTAAAFALLLL--CVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENG----AGASGASAFPGMNVDG
        M F+  +T   F +LLL  C  N+ A R L GE WL   +  ++  ++ R PV PSG NPC++IP    GRCTL+E E+      G +   AFPG+ V  
Subjt:  MAFYVMRTAAAFALLLL--CVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENG----AGASGASAFPGMNVDG

Query:  FAAASMVNQTQKEDPS
        FA AS  N ++K+D S
Subjt:  FAAASMVNQTQKEDPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTATGTTATGAGGACAGCGGCGGCGTTTGCTCTCCTTTTGCTCTGTGTTTTCAACGTATCCGCAGCTAGAGTCTTGACCGGAGAGCGGTGGCTGCCGGTACC
GGAGAGGGCGTCTATGTCCATGGCGATGCTGCGAGCCCCGGTTCCTCCTTCCGGTAGGAACCCGTGTTCGTTTATTCCTCGGCAAGGCCATGGACGCTGCACGTTGAGCG
AAGTGGAAAACGGTGCCGGTGCGAGCGGAGCCTCCGCCTTTCCCGGCATGAATGTTGATGGGTTTGCGGCGGCTTCCATGGTTAACCAAACCCAGAAGGAAGATCCTTCT
TTGAGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ACACAATTCACAATTCTATTCCTTTTTTTCATATGGCTTTTTATGTTATGAGGACAGCGGCGGCGTTTGCTCTCCTTTTGCTCTGTGTTTTCAACGTATCCGCAGCTAGA
GTCTTGACCGGAGAGCGGTGGCTGCCGGTACCGGAGAGGGCGTCTATGTCCATGGCGATGCTGCGAGCCCCGGTTCCTCCTTCCGGTAGGAACCCGTGTTCGTTTATTCC
TCGGCAAGGCCATGGACGCTGCACGTTGAGCGAAGTGGAAAACGGTGCCGGTGCGAGCGGAGCCTCCGCCTTTCCCGGCATGAATGTTGATGGGTTTGCGGCGGCTTCCA
TGGTTAACCAAACCCAGAAGGAAGATCCTTCTTTGAGCTCTTGAAACTCATGGTGGAATGGAATTGAGTTGAATCAATATTGAAGTTTTGTGTGTATAGTACTAATTCAT
ACATACATTTTTTTTTTCTTTTAATTATTTTTTTGTTCTATGGGTAAGACTCTTGGTGTTATTGGCCAAATTTGACCATTTTTTGCTTATTGAATCCCAAGGAATTAATG
AATGTGAATGCGAG
Protein sequenceShow/hide protein sequence
MAFYVMRTAAAFALLLLCVFNVSAARVLTGERWLPVPERASMSMAMLRAPVPPSGRNPCSFIPRQGHGRCTLSEVENGAGASGASAFPGMNVDGFAAASMVNQTQKEDPS
LSS