; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019301 (gene) of Chayote v1 genome

Gene IDSed0019301
OrganismSechium edule (Chayote v1)
DescriptionLYR motif-containing protein 4
Genome locationLG08:1455021..1455293
RNA-Seq ExpressionSed0019301
SyntenySed0019301
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453246.1 PREDICTED: LYR motif-containing protein 4 [Cucumis melo]1.4e-3282.22Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MA P+RS++LSLLRSLIRT+RQFCDYNIREYAKRR VDGFR +RNLSDPSSIS+AYADGKAQLEVA+RQS +YSL+APKVKSIME H  N
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

XP_011660289.1 LYR motif-containing protein 4 [Cucumis sativus]7.9e-3181.11Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MA+P+RS++LSLLRSLIRTAR F DYNIREYAKRRAVDGFR +RNLSDP SIS+AYADGKAQLEVA+RQS VYSL+ PKVKSIME H  N
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

XP_022134602.1 LYR motif-containing protein 4-like [Momordica charantia]1.4e-3282.22Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MATP+R+++LSLLRSL+RTAR FCDYN+REYAKRRAVDGFR +RNLSDPSSIS+AYADG+AQLEVARRQSTVYS FAPKVKSIM+ H  N
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

XP_022932898.1 LYR motif-containing protein 4 [Cucurbita moschata]5.3e-3587.78Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MATP+RS+SLSLLRSL+RTAR FCDYNIREYAKRRAVDGFR +RNLSDPSSI  AYADGKAQLEVA+RQSTVYSLF+PKVKSIME HHTN
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

XP_038879775.1 LYR motif-containing protein 4-like [Benincasa hispida]1.2e-3181.11Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        M  P+RS++LSLLRS +RTAR FCDYNIREYAKRRAVDGFR +RNLSDP SIS+AYADGKAQLEVA+RQS VYSL+APKVKSIME H TN
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

TrEMBL top hitse value%identityAlignment
A0A1S3BV74 LYR motif-containing protein 47.0e-3382.22Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MA P+RS++LSLLRSLIRT+RQFCDYNIREYAKRR VDGFR +RNLSDPSSIS+AYADGKAQLEVA+RQS +YSL+APKVKSIME H  N
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

A0A5A7UTC8 LYR motif-containing protein 47.0e-3382.22Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MA P+RS++LSLLRSLIRT+RQFCDYNIREYAKRR VDGFR +RNLSDPSSIS+AYADGKAQLEVA+RQS +YSL+APKVKSIME H  N
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

A0A6J1C021 LYR motif-containing protein 4-like7.0e-3382.22Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MATP+R+++LSLLRSL+RTAR FCDYN+REYAKRRAVDGFR +RNLSDPSSIS+AYADG+AQLEVARRQSTVYS FAPKVKSIM+ H  N
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

A0A6J1F322 LYR motif-containing protein 42.6e-3587.78Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MATP+RS+SLSLLRSL+RTAR FCDYNIREYAKRRAVDGFR +RNLSDPSSI  AYADGKAQLEVA+RQSTVYSLF+PKVKSIME HHTN
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

A0A6J1IC29 LYR motif-containing protein 42.6e-3587.78Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN
        MATP+RS+SLSLLRSL+RTAR FCDYNIREYAKRRAVDGFR +RNLSDPSSI  AYADGKAQLEVA+RQSTVYSLF+PKVKSIME HHTN
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN

SwissProt top hitse value%identityAlignment
B5X5U9 LYR motif-containing protein 4A3.1e-0634.12Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIME
        MA  SR+Q +SL R LI+ +++F  YN R YA RR  D FR + ++ +P ++       +  L V RRQ ++  ++  + ++I+E
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIME

O46098 Protein bcn922.0e-0535.62Show/hide
Query:  SRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFA
        +R Q+++L R+L+R + +   YN R YA R+  D FR +R+  D + I    A+G+  LE+ RRQ  +  L++
Subjt:  SRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFA

P82116 Protein bcn922.9e-0434.72Show/hide
Query:  SRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLF
        +R Q+++L R+L+R + +   YN R YA R+  D FR ++ + D + I      GK  LE+ RRQ  +  L+
Subjt:  SRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLF

Q6Q560 Protein ISD117.0e-0635.62Show/hide
Query:  PSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLF
        P+R Q LSL +  I+ A QF +YN REY   +    FR++ N  DP  +   + + K  L V +RQS +  ++
Subjt:  PSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLF

Q8K215 LYR motif-containing protein 41.5e-0841.56Show/hide
Query:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFA
        MA  SR+Q L L R+++R ++ F  YN R YA RR  D FR ++N+ DP  I A     K  LE+ RRQ  +  L++
Subjt:  MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein3.9e-2058.54Show/hide
Query:  SRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEV
        S S+ LSL R+L+R  RQF DYNIREY+KRR +DGFR ++NL+DPS ++ AYA+ K QL VA R   VY  + PK K+IMEV
Subjt:  SRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTCCATCGAGATCGCAATCCCTTTCGCTTCTCCGCTCTCTGATCCGCACAGCGCGCCAATTCTGCGACTACAACATCAGAGAGTACGCCAAGCGACGCGCCGT
CGACGGATTCCGCCGCCACCGGAACCTTTCCGATCCCTCCTCCATCTCCGCCGCCTACGCCGACGGCAAAGCTCAGCTCGAAGTTGCCAGAAGACAGTCCACCGTCTACT
CCCTCTTCGCGCCCAAGGTGAAGAGCATCATGGAGGTTCATCACACCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTCCATCGAGATCGCAATCCCTTTCGCTTCTCCGCTCTCTGATCCGCACAGCGCGCCAATTCTGCGACTACAACATCAGAGAGTACGCCAAGCGACGCGCCGT
CGACGGATTCCGCCGCCACCGGAACCTTTCCGATCCCTCCTCCATCTCCGCCGCCTACGCCGACGGCAAAGCTCAGCTCGAAGTTGCCAGAAGACAGTCCACCGTCTACT
CCCTCTTCGCGCCCAAGGTGAAGAGCATCATGGAGGTTCATCACACCAACTGA
Protein sequenceShow/hide protein sequence
MATPSRSQSLSLLRSLIRTARQFCDYNIREYAKRRAVDGFRRHRNLSDPSSISAAYADGKAQLEVARRQSTVYSLFAPKVKSIMEVHHTN