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Sed0019316 (gene) of Chayote v1 genome

Gene IDSed0019316
OrganismSechium edule (Chayote v1)
DescriptionBasic leucine zipper/W2 domain protein
Genome locationLG08:24908511..24908705
RNA-Seq ExpressionSed0019316
SyntenySed0019316
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588274.1 hypothetical protein SDJN03_16839, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1170.49Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAAILVTSVARMRMRDME  +II SDQQQQ+       + TD+
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

KAG7022194.1 hypothetical protein SDJN02_15924, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-1170.49Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAAILVTSVARMRMRDME  +II SDQQQQ+       + TD+
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

XP_022149993.1 uncharacterized protein LOC111018274 [Momordica charantia]4.5e-1291.49Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQ
        MARE NPGLKILWVW LGTAAILVTSVARMRMRDME  TIINSDQQQ
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQ

XP_022933307.1 uncharacterized protein LOC111440489 [Cucurbita moschata]8.4e-1170.49Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAAILVTSVARMRMRDME  +II SDQQQQ+       + TD+
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

XP_038878707.1 uncharacterized protein LOC120070883 [Benincasa hispida]8.4e-1178.57Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQ-----QQTSS
        MARE +PGLKILWVW LGTAAIL+TSVARMRMRDME   IINSDQQ     QQTSS
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQ-----QQTSS

TrEMBL top hitse value%identityAlignment
A0A5E4EDQ9 PREDICTED: Basic leucine zipper and W2 domain-containing3.5e-1063.93Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAA+LVTSV R R+RDME   ++N++QQQQ       A DTDT
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

A0A6J1D892 uncharacterized protein LOC1110182742.2e-1291.49Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQ
        MARE NPGLKILWVW LGTAAILVTSVARMRMRDME  TIINSDQQQ
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQ

A0A6J1EZE2 uncharacterized protein LOC1114404894.1e-1170.49Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAAILVTSVARMRMRDME  +II SDQQQQ+       + TD+
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

A0A6J5VBN1 Uncharacterized protein1.7e-0962.3Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAA+LVTSV R R+RDME   ++N++QQQQ       A DT+T
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

M5W1G1 Uncharacterized protein1.7e-0962.3Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT
        MARE +PGLKILWVW LGTAA+LVTSV R R+RDME   ++N++QQQ        A DTDT
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06010.1 unknown protein2.6e-1056.36Show/hide
Query:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAA
        M RE +PGLKILWVW +GTAAILVTSV R RM+DM+T+   N +Q  + +   +A
Subjt:  MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAGAGACGAACCCTGGCTTAAAGATTCTGTGGGTTTGGGCTCTTGGCACAGCCGCCATTCTCGTTACCAGCGTAGCTCGTATGAGAATGCGGGATATG
GAGACTGTTACTATTATCAACTCCGATCAACAACAACAAACCTCTTCCGCCGCCGCCGCCGCCGCCGACACCGACACATCACAGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAGAGACGAACCCTGGCTTAAAGATTCTGTGGGTTTGGGCTCTTGGCACAGCCGCCATTCTCGTTACCAGCGTAGCTCGTATGAGAATGCGGGATATG
GAGACTGTTACTATTATCAACTCCGATCAACAACAACAAACCTCTTCCGCCGCCGCCGCCGCCGCCGACACCGACACATCACAGGATTAG
Protein sequenceShow/hide protein sequence
MARETNPGLKILWVWALGTAAILVTSVARMRMRDMETVTIINSDQQQQTSSAAAAAADTDTSQD