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Sed0019318 (gene) of Chayote v1 genome

Gene IDSed0019318
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like
Genome locationLG05:38962579..38966331
RNA-Seq ExpressionSed0019318
SyntenySed0019318
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019342 - NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011652934.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Cucumis sativus]4.7e-3893.98Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNR+YKEEQRKLRAA+REAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
XP_022155272.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia]9.5e-3996.39Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA+REAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
XP_022948762.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata]2.8e-3895.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAAK EAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
XP_023521877.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo]8.0e-3893.98Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLR AK EAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
XP_038905985.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Benincasa hispida]2.1e-3895.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA+R+AKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
TrEMBL top hitse value%identityAlignment
A0A0A0KTA7 Fiber protein Fb142.3e-3893.98Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNR+YKEEQRKLRAA+REAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
A0A6J1DNW8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like4.6e-3996.39Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA+REAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
A0A6J1F476 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like1.1e-3792.77Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNR+YKEE+RKLRAA+REAKEGK  +AAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
A0A6J1GA50 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like1.3e-3895.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAAK EAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
A0A6J1KEK7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like1.3e-3895.18Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
        MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKEEQRKLRAAK EAKEGKH DAAHA
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA
SwissProt top hitse value%identityAlignment
O82238 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A1.1e-3487.5Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKR---EAKEGKH
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R   EA +G H
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKR---EAKEGKH
Q9LZI6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B1.1e-3490.54Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R+ +E
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKE
Arabidopsis top hitse value%identityAlignment
AT2G47690.1 NADH-ubiquinone oxidoreductase-related8.0e-3687.5Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKR---EAKEGKH
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R   EA +G H
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKR---EAKEGKH
AT2G47690.2 NADH-ubiquinone oxidoreductase-related7.5e-2694Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKE
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKE
AT3G62790.1 NADH-ubiquinone oxidoreductase-related8.0e-3690.54Show/hide
Query:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKE
        MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAA R+ +E
Subjt:  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGATTTCAGCGATTGTATGTCCCGCTGTCGAGAACCGAAGGATTGTACG
CTTCTCCGTGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGTTTCAAAGAAGAAACCGTATTTACAAGGAGGAGCAGCGTAAACTAAGAGCAGCCAAACGG
GAAGCCAAAGAGGGTAAACATGCTGATGCTGCCCATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATTCCATTTTTACCCCCAAGGAAAATCCAACTTCACTGCATCAGCGGCTAGGCCACGCCATTAGAAGCACAACTCACGAACCAGAGACTCCGATTCAGAGCATGG
CGTCAGGCTGGGGAATCACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGATTTCAGCGATTGTATGTCCCGCTGTCGAGAACCGAAGGATTGTACGCTTC
TCCGTGAAGATTACCTCGAGTGCCTCCACCATTCCAAGGAGTTTCAAAGAAGAAACCGTATTTACAAGGAGGAGCAGCGTAAACTAAGAGCAGCCAAACGGGAAG
CCAAAGAGGGTAAACATGCTGATGCTGCCCATGCATAGTAATAATCATCTATCAGAGTTTGAATAATAAAAAATGCATAGACATGCGTTGTTATTTGAACAGTTT
TTGACTTGTCAGTGACATTATATTTTATTTTTCTCTTCTGAATCCAGTATGAAATTCACAAGTCATGAAATAAGGCCAATTCATTTCTTTTTTCCTTGCTCCATC
TAAAGGGCAGCACTATCTGCTTGAAGATGATATTGATTGTGTTATTGGCACTTAAATTTTATTTCCAAGTTCTTGTTTGATCGTTAA
Protein sequenceShow/hide protein sequence
MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAKREAKEGKHADAAHA