| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025242.1 pol protein [Cucumis melo var. makuwa] | 1.0e-94 | 36.99 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
RGTR G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
Query: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
V AE + L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G + TWE FK F
Subjt: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
Query: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
AK+ S + ++ F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P +A + P A
Subjt: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
Query: TVGQKRKFDFRG--GGQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
+GQKRK + + QR R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQG
Subjt: TVGQKRKFDFRG--GGQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
Query: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
RVFATTRQEAER + G F+ LSV+T SG +L++++IK R+EI+ +L TL+VL M F
Subjt: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
Query: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
DVILGM+WL+ANHA I+C+ KEVVF S + G+ + VV P + VVRE+ DVF PG
Subjt: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
Query: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
AP R ELKE + +LQE+LD+GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA V
Subjt: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
Query: FSKIDLRSDYH
FSKIDLRS YH
Subjt: FSKIDLRSDYH
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| KAA0048442.1 pol protein [Cucumis melo var. makuwa] | 5.7e-98 | 39.12 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
RG R G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A V AE +
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
Query: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSP--PATWEFFKSEFKAKYISDEAQEKMVE
L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G TWE FK F AK+ S + ++
Subjt: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSP--PATWEFFKSEFKAKYISDEAQEKMVE
Query: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKF----DF
F NL+QG ++E+Y+ +F FAP +I + KF+ GLR I P +A + P A +GQKRK D
Subjt: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKF----DF
Query: RGGGQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERTD
R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQGRVFATTRQEAER
Subjt: RGGGQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERTD
Query: AAIA---GFELSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANHALIECHRKEVVF------------------------
+ G LSV+T SG + ++++IK R+EI+ +L TL+VL M FDVILGM+WL+ANHA I+C KEVVF
Subjt: AAIA---GFELSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANHALIECHRKEVVF------------------------
Query: -------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVS
S + G+ + VV P + VVRE+ DVF PG AP R ELKE + +LQE+LD+GFIRPSVS
Subjt: -------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
PWGAPVLFVK KDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA VFSKIDLRS YH
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| KAA0053272.1 gag protease polyprotein [Cucumis melo var. makuwa] | 1.0e-94 | 37.39 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
RG R G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A V AE +
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
Query: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFKAKYISDEAQEKMVE
L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G + TWE FK F AK+ S + ++
Subjt: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFKAKYISDEAQEKMVE
Query: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKFDFRGG-
F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P +A + P A +GQKRK + +
Subjt: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKFDFRGG-
Query: ----GQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERT
R G FQ Q A A R+ PAC TCGR H C +CFRC + GH A C + QP+ QQGRVFATTRQEAER
Subjt: ----GQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERT
Query: DAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANH
+ G F+ LSV+T SG +L++++IK R+EI+ +L TL+VL M FDVILGM+WL+ANH
Subjt: DAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANH
Query: ALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------
A I+C KEVVF S + G+ + VV P + VVRE+ DVF PG
Subjt: ALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------
Query: APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
AP R ELKE + +LQE+LD+GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRI+DLFDQLQGA VFSKIDLRS YH
Subjt: APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| KAA0054800.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.3e-94 | 38.34 | Show/hide |
Query: MPVTRDG-RGRPRAGRGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQV
MP R RG R GRG + Q E P AP V P V + ++A E+ + D ++A + A PPAP+E
Subjt: MPVTRDG-RGRPRAGRGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQV
Query: APEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEF
A + AE + L+DF K+ + FD S D A W+ +E F M CP+ Q+ +C L WWE+ +ER G + TWE FK F
Subjt: APEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEF
Query: KAKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERVVAAPV-------QRPVP-------
AK+ S + ++ F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P A + +R P
Subjt: KAKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERVVAAPV-------QRPVP-------
Query: ATVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQ
+ VGQKRK + + QR R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQ
Subjt: ATVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQ
Query: GRVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSG
GRVFATTRQEAER + G F+ LSV+T SG +L+++KIK R+EI+ +L TL+VL M
Subjt: GRVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSG
Query: FDVILGMEWLAANHALIECHRKEVVF-----SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGA
FDVILGM+WL+ANHA I+C KEVVF +S+ + V+ + P + VVRE+ DVF PG AP R
Subjt: FDVILGMEWLAANHALIECHRKEVVF-----SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGA
Query: NELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
ELKE + +LQE+LD+GFIRPSVSPWGAPVLF+KKKDGSM LCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA VFSKIDLRSDYH
Subjt: NELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| TYJ95850.1 pol protein [Cucumis melo var. makuwa] | 1.3e-94 | 36.99 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
RGTR G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
Query: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
V AE + L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G + TWE FK F
Subjt: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
Query: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
AK+ S + ++ F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P +A + P A
Subjt: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
Query: TVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
+GQKRK + + QR R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQG
Subjt: TVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
Query: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
RVFATTRQEAER + G F+ LSV+T SG +L++++IK R+EI+ +L TL+VL M F
Subjt: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
Query: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
DVILGM+WL+ANHA I+C+ KEVVF S + G+ + VV P + VVRE+ DVF PG
Subjt: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
Query: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
AP R ELKE + +LQE+LD+GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA V
Subjt: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
Query: FSKIDLRSDYH
FSKIDLRS YH
Subjt: FSKIDLRSDYH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TSL0 Reverse transcriptase | 4.9e-95 | 36.99 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
RGTR G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
Query: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
V AE + L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G + TWE FK F
Subjt: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
Query: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
AK+ S + ++ F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P +A + P A
Subjt: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
Query: TVGQKRKFDFRG--GGQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
+GQKRK + + QR R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQG
Subjt: TVGQKRKFDFRG--GGQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
Query: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
RVFATTRQEAER + G F+ LSV+T SG +L++++IK R+EI+ +L TL+VL M F
Subjt: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
Query: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
DVILGM+WL+ANHA I+C+ KEVVF S + G+ + VV P + VVRE+ DVF PG
Subjt: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
Query: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
AP R ELKE + +LQE+LD+GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA V
Subjt: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
Query: FSKIDLRSDYH
FSKIDLRS YH
Subjt: FSKIDLRSDYH
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| A0A5A7TY28 Reverse transcriptase | 2.8e-98 | 39.12 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
RG R G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A V AE +
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
Query: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSP--PATWEFFKSEFKAKYISDEAQEKMVE
L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G TWE FK F AK+ S + ++
Subjt: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSP--PATWEFFKSEFKAKYISDEAQEKMVE
Query: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKF----DF
F NL+QG ++E+Y+ +F FAP +I + KF+ GLR I P +A + P A +GQKRK D
Subjt: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKF----DF
Query: RGGGQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERTD
R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQGRVFATTRQEAER
Subjt: RGGGQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERTD
Query: AAIA---GFELSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANHALIECHRKEVVF------------------------
+ G LSV+T SG + ++++IK R+EI+ +L TL+VL M FDVILGM+WL+ANHA I+C KEVVF
Subjt: AAIA---GFELSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANHALIECHRKEVVF------------------------
Query: -------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVS
S + G+ + VV P + VVRE+ DVF PG AP R ELKE + +LQE+LD+GFIRPSVS
Subjt: -------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVS
Query: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
PWGAPVLFVK KDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA VFSKIDLRS YH
Subjt: PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| A0A5A7UC03 Gag protease polyprotein | 4.9e-95 | 37.39 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
RG R G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A V AE +
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQVAPEADVAEGAEELGR
Query: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFKAKYISDEAQEKMVE
L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G + TWE FK F AK+ S + ++
Subjt: WLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFKAKYISDEAQEKMVE
Query: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKFDFRGG-
F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P +A + P A +GQKRK + +
Subjt: LFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------TVGQKRKFDFRGG-
Query: ----GQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERT
R G FQ Q A A R+ PAC TCGR H C +CFRC + GH A C + QP+ QQGRVFATTRQEAER
Subjt: ----GQRRQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQGRVFATTRQEAERT
Query: DAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANH
+ G F+ LSV+T SG +L++++IK R+EI+ +L TL+VL M FDVILGM+WL+ANH
Subjt: DAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGFDVILGMEWLAANH
Query: ALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------
A I+C KEVVF S + G+ + VV P + VVRE+ DVF PG
Subjt: ALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------
Query: APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
AP R ELKE + +LQE+LD+GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRI+DLFDQLQGA VFSKIDLRS YH
Subjt: APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| A0A5A7UHN4 Reverse transcriptase | 6.4e-95 | 38.34 | Show/hide |
Query: MPVTRDG-RGRPRAGRGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQV
MP R RG R GRG + Q E P AP V P V + ++A E+ + D ++A + A PPAP+E
Subjt: MPVTRDG-RGRPRAGRGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG----------------AAAPPAPQEQV
Query: APEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEF
A + AE + L+DF K+ + FD S D A W+ +E F M CP+ Q+ +C L WWE+ +ER G + TWE FK F
Subjt: APEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEF
Query: KAKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERVVAAPV-------QRPVP-------
AK+ S + ++ F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P A + +R P
Subjt: KAKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERVVAAPV-------QRPVP-------
Query: ATVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQ
+ VGQKRK + + QR R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQ
Subjt: ATVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQ
Query: GRVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSG
GRVFATTRQEAER + G F+ LSV+T SG +L+++KIK R+EI+ +L TL+VL M
Subjt: GRVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSG
Query: FDVILGMEWLAANHALIECHRKEVVF-----SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGA
FDVILGM+WL+ANHA I+C KEVVF +S+ + V+ + P + VVRE+ DVF PG AP R
Subjt: FDVILGMEWLAANHALIECHRKEVVF-----SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG-----------------APQERGSVSYGA
Query: NELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
ELKE + +LQE+LD+GFIRPSVSPWGAPVLF+KKKDGSM LCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA VFSKIDLRSDYH
Subjt: NELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| A0A5D3CQB5 Reverse transcriptase | 6.4e-95 | 36.99 | Show/hide |
Query: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
RGTR G + PPVAP V P V + ++A E+ + D ++A + A APPAP+E A
Subjt: RGTRIRSDTAGTSSQAETDGIPPVAPPVAPRGGVEASERREIALPEREFADSMRALMG------------------------------AAAPPAPQEQVA
Query: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
V AE + L+DF K+ + FD S D A W+ +E F M CP+ Q+ +CA L WWE+ +ER G + TWE FK F
Subjt: PEADVAEGAEELGRWLKDFVKWKLEKFDASGD-ALAAARWIAHLEYTFLIMVCPDVQRPRCAAHVLGGTARWWWESTLSERPAGSPPA--TWEFFKSEFK
Query: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
AK+ S + ++ F NL+QG ++E+Y+ +F FAP ++ + KF+ GLR I P +A + P A
Subjt: AKYISDEAQEKMVELFQNLKQGSDSIEEYERKFSEYGYFAPQLIATPELKIRKFISGLR--QATIYNGKYPVERV----VAAPVQRPVPA----------
Query: TVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
+GQKRK + + QR R G R +R A + R+ PAC TCGR H C +CFRC + GH A C + QP+ QQG
Subjt: TVGQKRKFDFRGG--GQR--RQGQFQNRDQRRAPARFQPSQQGGPRQFPACATCGRAHAEACQTRPRLCFRCGREGHLARFCDQPAMAV---QPAQQQQG
Query: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
RVFATTRQEAER + G F+ LSV+T SG +L++++IK R+EI+ +L TL+VL M F
Subjt: RVFATTRQEAERTDAAIAG------------FE--------------------------LSVATFSGVNMLARDKIKDGRIEISGELLVATLIVLPMSGF
Query: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
DVILGM+WL+ANHA I+C+ KEVVF S + G+ + VV P + VVRE+ DVF PG
Subjt: DVILGMEWLAANHALIECHRKEVVF-------------------------------SSWSLGLSSQVVRGEPPLAIVDQSLVVREFADVFLRSSPG----
Query: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
AP R ELKE + +LQE+LD+GFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLPRIDDLFDQLQGA V
Subjt: -------------APQERGSVSYGANELKESRFRLQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFV
Query: FSKIDLRSDYH
FSKIDLRS YH
Subjt: FSKIDLRSDYH
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| SwissProt top hits | e value | %identity | Alignment |
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| P0CT34 Transposon Tf2-1 polyprotein | 1.6e-13 | 44.16 | Show/hide |
Query: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
+ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+ +F+K+DL+S YH
Subjt: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| P0CT41 Transposon Tf2-12 polyprotein | 1.6e-13 | 44.16 | Show/hide |
Query: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
+ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+ +F+K+DL+S YH
Subjt: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.7e-18 | 51.95 | Show/hide |
Query: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
+Q++LD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL S YH
Subjt: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 2.7e-18 | 51.95 | Show/hide |
Query: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
+Q++LD FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL S YH
Subjt: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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| Q9UR07 Transposon Tf2-11 polyprotein | 1.6e-13 | 44.16 | Show/hide |
Query: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
+ + L G IR S + PV+FV KK+G++R+ +DY+ LNK N YPLP I+ L ++QG+ +F+K+DL+S YH
Subjt: LQEMLDRGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGAFVFSKIDLRSDYH
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