CuGenDBv2

Gene ID	Sed0019342
Organism	Sechium edule (Chayote v1)
Description	Dymeclin
Genome location	LG12:6081511..6086991
RNA-Seq Expression	Sed0019342
Synteny	Sed0019342
Gene Ontology terms	GO:0007030 - Golgi organization (biological process) GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582331.1 Dymeclin, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

KAG7018740.1 Dymeclin [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

XP_022956230.1 dymeclin-like [Cucurbita moschata]

2.3e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

XP_022980147.1 dymeclin-like [Cucurbita maxima]

3.0e-20

91.23

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPF++AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

XP_023527150.1 dymeclin-like [Cucurbita pepo subsp. pepo]

2.3e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AWU0 Dymeclin

1.5e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        +H VLSFIGSVNISNEKY LHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

A0A5A7U1X1 Dymeclin

1.5e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        +H VLSFIGSVNISNEKY LHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

A0A5D3D151 Dymeclin

1.5e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        +H VLSFIGSVNISNEKY LHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

A0A6J1GX92 Dymeclin

1.1e-20

92.98

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFI+AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

A0A6J1IQL8 Dymeclin

1.5e-20

91.23

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ
        MH VLSFIGSVN+S+EKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPF++AAMAQ
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G04200.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

6.3e-16

68.97

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Query:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQK
        MH VLSFIGS  +S   Y+LH ELLNFML+ MSTQLLSGPS  P D NPFI+AAM Q+
Subjt:  MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQK

Sequences

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CDS sequence

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ATGCATTGTGTTCTTAGCTTTATCGGTTCAGTTAATATAAGCAATGAGAAATACCTCCTCCATGTTGAGCTGCTTAACTTTATGCTAATTGCTATGTCAACTCAACTTCT
TTCTGGTCCATCTCCTAGACCGAAGGATTTTAATCCATTTATTAACGCAGCCATGGCTCAGAAAATTTTGTGTTGGTGCCATTCAACTACCTGGTCAGTTCAACTTCCCA
AAGCTCAAGAAGTCCAATGGCTGATTGCAGTCTACACATTCTTCTTATTCTCATTCATTATCATAAATGTATAG

mRNA sequence

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GTTAATCTATTTTAACTTAGTTTGGCACAATTTCTTGTCCTTGTTCGTTACGAGCGGAATAGGATTCATGGTTTTTTTTTCCTGGCAAGAAGTTTGATCGAGCGATTCGG
AGTTTCTCTACCTGTAATGCCGTCGATGTGAATTCACCAAGGTTTGAATTTGGTTGTTTTTGGATTTTGGTCGGCATTGGCACCGTACTGAAGGATTGAGCCGAAAATCT
AGGGTTTAGATGGGGGCTGTGCCTTCTACGGCGGAGTACCTGATTGGAGCTTTTGTCGGAGACGAGCCTTTTCCGATTTCTGGCGGAAATTGCTTGACCTTCCTCTCACT
CTTCAATGGCCGACTCACCGCGTTCAACAAGCTTGTGCCCTTTTAGGGTGGTGTGGGCTGCGGCGGCCGCGGCTTTAGACATCAATATGGAATTTTTCAGAACAAAATGT
TGAGGATTTTGTAATGCATTGTGTTCTTAGCTTTATCGGTTCAGTTAATATAAGCAATGAGAAATACCTCCTCCATGTTGAGCTGCTTAACTTTATGCTAATTGCTATGT
CAACTCAACTTCTTTCTGGTCCATCTCCTAGACCGAAGGATTTTAATCCATTTATTAACGCAGCCATGGCTCAGAAAATTTTGTGTTGGTGCCATTCAACTACCTGGTCA
GTTCAACTTCCCAAAGCTCAAGAAGTCCAATGGCTGATTGCAGTCTACACATTCTTCTTATTCTCATTCATTATCATAAATGTATAGCTAGCAATGAATCTGTCGCAAGT
GGGGATAATGTTAGTTCAGATTCTCTTTTGAAAGAGAATGCAACCTTTTATGATAATCCGTATTGCCAAGCCTTGGAAAATGCATCTGATGTTGAATCTAAGATAATAAA
TTTTCTTTGCTCCATTATTATTTGCTTCTTATTCTAGCTAGTTTATGTTATGTTTGATGCTGGTTTATTTTGTACTTGTGGTTTCAGTTGATCATGTTGATACAGATGGA
AATGCACATAATAGTCCACTTGTGCAGTTACCATTTGCTGTGTTGTTTGATACTCATGGAATTTATGTATTTTCTCTCTTGTTTAATAAAAGTTGATAATAATGTGTTCA
TATTTTACATGTAATGGTTTATGCATTCCGGACTCTAGTTGGAACATTGCTATATTTTCATGAATTTAGGAAGCTTTTGCGTACTACTTCCGAGTTCACACATCTCCTCC
TCACCACCCCATCATCTTCTTCTGTTTATTATTCTGGTGATATTTCACCTGTTGTTTTCTGAATATGAATTTAATCTGTTGTGTCTACTTCTATATGTTTATTTACTTTT
TCATTTTTATCCTTCGTTGCAATTTGCTTTTTCATAGAGATTATCCTATTTGATAGGCTCTTTTGTAACTTTTCATTTATCAATGAAAATTTTGTTTCCTATCAATTTTT
TTTTATCCTTTGTTGATTGTATTTTGGAGCATTAGCCTCTTTTCGTTACATCAATGAATTTTTTGTGTTGCCTTGTCAAAGAAAAAAGAATCCTGTTCTTATATCTCATT
TTACTATGTTGCTGTACCTGGTTAAAAGTTAATATGTGCATACTTGGTATTATCTGTACTATATACTATTTTTAGACACAAAGGCTGTTGGCACGAGACAACATTTTTCT
TTGAGTTATCCTTAACCGGTCTTGTTTCTGCAGGTACTTGGCTGATGAGGGTTCTGTGCTTCTGCTCTACTCATTATTGCAAGGCAATCCTGACTTCTTGGAATATGTTT
TGGTGCGAACTAATTTGGATACATTGTTGATGCCCATTTTGGAAGCACTCTACAATGCTTCGACGAGGTCATCCAATCAAATCTACGTGCTACTGATCATACTTCTAATT
CTTAGTCAGGATTCTACATTCAATGCAACCATTCACAAACTGGTACTAGATTTCTTCAATAGCCGCATAGATGCTCAAAGAATGGATGACGATTGGTCATTGGAGAAAGT
GCTCCAAGTTATCATTGATCACTGCCGATCTTGGCATGGAGGGGCTTGAAGATGTTTACCCAATTACGTTTCACGTATGAGCAAGAAAGTCATCCCGAAGAGTTCTTCAT
TCCATGTGTGGCAGCTTGTACTATCAACTTGTGGCTTCAACTTTAATGCCGGAGTCATAAATTTGTTTCCAGCCAATCATCTACCTTCAGAAGTGCCTTCAACTATGTAA
ATTTGTGAAAGAAGATGATGAAGATGCAGCGCAACATTATAAGCAATCAAATGGTGAGCATCACAAATTGGCGATCTATCCTTGGCAGATGCAAGGTATCATAAATATAT
TCTCCGTCCCCGCCCCCGTTAGAGATGCGGGTGGTTTACGGTATGTATATAGATGAAAATATATCCATCCATTCTTTTTCTGTTTACATGTTTTGACGCAAGAAGCCAGC
CAACTGTAGATAATTGTTTTTTAGGAGATAATTGTGTAATGAATAAGAGACTGC

Protein sequence

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MHCVLSFIGSVNISNEKYLLHVELLNFMLIAMSTQLLSGPSPRPKDFNPFINAAMAQKILCWCHSTTWSVQLPKAQEVQWLIAVYTFFLFSFIIINV

Sed0019342 (gene) of Chayote v1 genome