; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019346 (gene) of Chayote v1 genome

Gene IDSed0019346
OrganismSechium edule (Chayote v1)
DescriptionDNA-directed RNA polymerase III subunit rpc4
Genome locationLG12:28379354..28384827
RNA-Seq ExpressionSed0019346
SyntenySed0019346
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590029.1 DNA-directed RNA polymerase III subunit RPC4, partial [Cucurbita argyrosperma subsp. sororia]4.4e-10770.38Show/hide
Query:  SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRT
        ++ A +RKMKF PKA   RIPKPEVKEE+AE+  +AQA+++LK F+E   R +Q+IGKKAAPTQVAFGSGGTSST+RS+G+ K  N   NEDG+LPS+ +
Subjt:  SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRT

Query:  KEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEG
        KEYVEPWD+YS YPVTLP+R  Y GNP+SLNEEEFGE SE  +YDE  TTPAVDLGL+EE PET IFFLQLPPM+P++K+SS +E +G      +  S  
Subjt:  KEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEG

Query:  SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        SQP+QKTCS+NELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQDVAAINVEGK+CCI+GEL+KRAILTPDV+SMLK+IED
Subjt:  SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]2.3e-11171.77Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQNP  +  A  RK+KF PKA   RIPKPEVK E+AE+  +AQA+++LK F+E+ +R KQ++G+KAAPTQVAFGSGG+SSTLRSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLP+S +KEYVEPWD+YS YPVTLPLR  Y GNP+SLNEEEFGEASEN TYDEN TT A++LGL+EE PE  + FLQLPPM+P++K+SS++E MG     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        +SE+++ SQP+QKTCS+NELP GSIGKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQ+VAAINVEGK CCIVGEL+KRAILTPDVDSMLK+IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

XP_008450913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo]2.3e-11171.09Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQ+P  +  AP RK+KF PKA   R+PKPEVK E+AE++ +AQA+++LK F+E+ +R KQ++G+KAAPTQVAFGSGG+SSTLRSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLP+S +KEYVEPWD+YS YPVTLPLR  Y GNP+SLNEEEFGEASEN TYDEN TT A++LGL+EE PET +FFLQLPPM+P++K+SS +E MG     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
         SE++  SQ +QKTCS+NELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQ+VAAIN+EGKHCCIVGEL+KRAILTPDVDSML++IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]3.5e-11272.79Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQ+P  +N   +RKMKF PKA   R+PKPEVK E+ EE  +AQAK++LK F+E+  R KQK+GKKAAPTQVAFGSGGTS+T+RSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLPSS +KEYVEPWD+YS YPVTLPLR  Y G+P+SLNEEEFGEASENRTYDE+ TTPA+DLGL+EE PET +FFLQ+PPM+P+ K+SS +E  G     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        +SE+S+GS+ +Q  CSLNELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQDVAAINVEGKHCCIVGEL+KRAILTPDVDSMLK IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]1.9e-11072.11Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQ+P  +  A  RK+KF PKA   RIPKPEVK E+AE+  +AQA+++LK F+E+  R KQKIG+KAAPTQVAFGSGGTSSTLRSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLPSS +KEYVEPWD+YS YPVTLPLR  Y GNP+SLNEEEFGEASEN  YDEN TTPA+DLGL+EE PE  +FFLQLPPM+P++K+SS +E  G     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        + E+S+GSQP+QK C +NELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQDVAA+NVEGK CCIVGEL+KRAILTPDVDS+LK+IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein1.1e-11171.77Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQNP  +  A  RK+KF PKA   RIPKPEVK E+AE+  +AQA+++LK F+E+ +R KQ++G+KAAPTQVAFGSGG+SSTLRSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLP+S +KEYVEPWD+YS YPVTLPLR  Y GNP+SLNEEEFGEASEN TYDEN TT A++LGL+EE PE  + FLQLPPM+P++K+SS++E MG     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        +SE+++ SQP+QKTCS+NELP GSIGKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQ+VAAINVEGK CCIVGEL+KRAILTPDVDSMLK+IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC41.1e-11171.09Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQ+P  +  AP RK+KF PKA   R+PKPEVK E+AE++ +AQA+++LK F+E+ +R KQ++G+KAAPTQVAFGSGG+SSTLRSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLP+S +KEYVEPWD+YS YPVTLPLR  Y GNP+SLNEEEFGEASEN TYDEN TT A++LGL+EE PET +FFLQLPPM+P++K+SS +E MG     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
         SE++  SQ +QKTCS+NELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQ+VAAIN+EGKHCCIVGEL+KRAILTPDVDSML++IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc41.7e-11272.79Show/hide
Query:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG
        MEQ+P  +N   +RKMKF PKA   R+PKPEVK E+ EE  +AQAK++LK F+E+  R KQK+GKKAAPTQVAFGSGGTS+T+RSYG+ K  N PRNEDG
Subjt:  MEQNP--SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDG

Query:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK
        TLPSS +KEYVEPWD+YS YPVTLPLR  Y G+P+SLNEEEFGEASENRTYDE+ TTPA+DLGL+EE PET +FFLQ+PPM+P+ K+SS +E  G     
Subjt:  TLPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPK

Query:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        +SE+S+GS+ +Q  CSLNELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQDVAAINVEGKHCCIVGEL+KRAILTPDVDSMLK IED
Subjt:  NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

A0A6J1HBC9 uncharacterized protein LOC1114618278.2e-10770.03Show/hide
Query:  SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRT
        ++ A +RKMKF PKA   RIPKPEVKEE+AE+  +AQA+++LK F+E   R +Q+IGKKAAPTQVAFGSGGTSST+RS+G+ K  N   NEDG+LPS+ +
Subjt:  SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRT

Query:  KEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEG
        KEYVEPWD+YS YPVTLP+R  Y GNP+SLNEEEFGE SE  +YDE  TTPAVDLGL+EE PET IFFLQLPPM+P++K+SS +E +G      +  S  
Subjt:  KEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEG

Query:  SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        SQP+QKTCS+NELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM CGFAQDVAAINVEGK+CC +GEL+KRAILTPDV+SMLK+IED
Subjt:  SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

A0A6J1JLT3 uncharacterized protein LOC1114855834.8e-10770.03Show/hide
Query:  SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRT
        ++ A +RKMKF PKA   RIPKPEVKEE+AE+  +AQA+++LK F+E+  R +Q+IGKKAAPTQVAFGSGGTS+T+RS+G+ K  N   NEDG+LPS+ +
Subjt:  SNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRT

Query:  KEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEG
        KEYVEPWD+YS YPVTLPLR  Y GNP+SLNEEEFGE SE  +YDE  TTPAVDLGL+EE PET IFFLQLPPM+P++K+SS +E +G      +  S  
Subjt:  KEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEG

Query:  SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
        SQP+QKTCS+NELP GS+GKLLVYRSGAVKLKLGDI+YDVS GM+CGFAQDVAAINVEGK+CCI+GEL+KRAILTPDV+SMLK++ED
Subjt:  SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED

SwissProt top hitse value%identityAlignment
P05423 DNA-directed RNA polymerase III subunit RPC43.8e-0829.01Show/hide
Query:  ETKIFFLQLPPMMPLMKKSSAI-----EVMGPPPPK---NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAA
        E ++ FLQLP  +P    +  I     EV G          EK   ++  +  C+L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  ETKIFFLQLPPMMPLMKKSSAI-----EVMGPPPPK---NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAA

Query:  INVEGK---HCCIVGELNKRAILTPDVDSML
        + +         ++G +  + + +PD +S+L
Subjt:  INVEGK---HCCIVGELNKRAILTPDVDSML

P25441 DNA-directed RNA polymerase III subunit RPC42.5e-0424.81Show/hide
Query:  MEERPETKIFFLQLPPMMPLMKKSSA------IEVMGPPPPKNSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQD
        M  +PE  + F QLP  +P  ++ +       +E     P K  +K+   +  +   S  EL  G +G + V++SG + +K+G+++ D+  G    F QD
Subjt:  MEERPETKIFFLQLPPMMPLMKKSSA------IEVMGPPPPKNSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQD

Query:  VAAINV--EGKHCCIVGELNKRAILTPDV
        V A+++  +     ++G ++ + ++TP +
Subjt:  VAAINV--EGKHCCIVGELNKRAILTPDV

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC44.4e-0924.88Show/hide
Query:  GPRNEDGTLPSSRTKEYVEPWDHYSNYPVTLPLR--ERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAI
        GP+ ED  +     K   EP D      +  PLR   +  G P+ ++  E                   +L L +E    ++ FLQLP  +P    +  I
Subjt:  GPRNEDGTLPSSRTKEYVEPWDHYSNYPVTLPLR--ERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAI

Query:  EVM--------GPPPPKNSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKH---CCIVGELNKRAI
        + +        G       EK   ++  + TC+L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ ++ +         ++G +  + +
Subjt:  EVM--------GPPPPKNSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKH---CCIVGELNKRAI

Query:  LTPDVDSML
         +P+ +S+L
Subjt:  LTPDVDSML

Q8T1V7 DNA-directed RNA polymerase III subunit rpc48.7e-0531.76Show/hide
Query:  MKKSSAIEVMGPPPPKNSEKS---EGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEG
        + +++ IE   PPPPK  ++        P     S+ E+P G +G L +Y+SG   LK+G + YD+S G    F ++V     +G
Subjt:  MKKSSAIEVMGPPPPKNSEKS---EGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEG

Q91WD1 DNA-directed RNA polymerase III subunit RPC47.6e-0925.84Show/hide
Query:  GPRNEDGTLPSSRTKEYVEPWDHYSNYPVTLPLR--ERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAI
        GP+ ED  +     K   EP D      V  P R   +  G P+ ++  E                   +L LM++    ++ FLQLP  +P    +  I
Subjt:  GPRNEDGTLPSSRTKEYVEPWDHYSNYPVTLPLR--ERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAI

Query:  -----EVMGPPPPK---NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGK---HCCIVGELNKRAI
             EV G          EK   ++  +  C+L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ ++ +         ++G +  + +
Subjt:  -----EVMGPPPPK---NSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGK---HCCIVGELNKRAI

Query:  LTPDVDSML
         +PD +S+L
Subjt:  LTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC42.0e-3332.12Show/hide
Query:  PKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRN---------------------E
        P  + P  P    + E  EE++ A      + FD     ++ K   KA+  +VAF    +   +RS+G+ K  + P +                     E
Subjt:  PKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRN---------------------E

Query:  DG----TLPSSRTKEYVEPWDH-YSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLME-ERPETKIFFLQLPPMMPLMKKSSAIE
        DG       +    +YVEPWD+  S YP  LPLR+   G+ E L++EEFGE ++NR YDEN    A +LGL   +  + ++F  ++P  +P++K+++   
Subjt:  DG----TLPSSRTKEYVEPWDH-YSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLME-ERPETKIFFLQLPPMMPLMKKSSAIE

Query:  VMGPPPPKNSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSI
                 +++S        +     LP G +GK+LVY+SGAVKLK+GD L+DVSPG       DV AI+++G++C  +G   K   +TPDV+S+L   
Subjt:  VMGPPPPKNSEKSEGSQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSI

Query:  ED
         D
Subjt:  ED

AT5G09380.1 RNA polymerase III RPC41.9e-5545.42Show/hide
Query:  MEQNPSNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDV-SAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGT
        MEQ P    P RKMKF PKA   R+PKPEVK E+ E++  SAQA  +L+  +E + R K K  KK   +QVA+  GG  ++ RS    K +N      G+
Subjt:  MEQNPSNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDV-SAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGT

Query:  LPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKN
          S++  EY EPWD+YS YP+TLP+R  Y G+PE L+ EEF +A     + E++   A +LGLME+  E K+FF++LP +            +   P +N
Subjt:  LPSSRTKEYVEPWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKN

Query:  SEKSEG--SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED
         E         ++KT  L  LP G +GKLLVY+SGAVK+KLG++LYDVSPG+   FAQDV  +N E K+CC+VG++ K A+LTPD+DS+LK IE+
Subjt:  SEKSEG--SQPQQKTCSLNELPPGSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAAATCCGTCCAATCGAGCTCCCCGAAGGAAGATGAAGTTTATTCCAAAAGCACAGGCTCCTCGTATACCAAAACCTGAAGTCAAAGAAGAATTAGCCGAGGA
AGACGTTTCCGCTCAAGCCAAGAATATACTAAAAATGTTCGATGAAAATGCCAAGAGGAAAAAGCAGAAAATTGGAAAAAAAGCCGCACCTACACAAGTTGCATTTGGTT
CTGGAGGTACATCAAGCACCTTACGATCATATGGTCTTCAAAAAATTGTAAATGGACCCAGAAATGAAGATGGAACTCTTCCGTCTAGTAGAACCAAGGAGTATGTGGAA
CCATGGGATCATTACAGTAATTATCCTGTAACTCTTCCTTTACGGGAACGATATTTAGGAAATCCAGAATCTCTTAACGAGGAAGAATTTGGCGAGGCTTCAGAAAACAG
AACATACGATGAAAATGCAACAACTCCTGCAGTGGATCTTGGTCTAATGGAGGAGAGACCAGAAACAAAGATCTTTTTTCTACAATTGCCACCTATGATGCCTCTGATGA
AGAAATCTTCTGCAATAGAAGTCATGGGGCCACCGCCACCCAAAAACTCGGAAAAAAGTGAAGGCTCACAACCTCAACAGAAAACCTGCTCACTGAATGAGTTACCTCCT
GGCTCCATCGGTAAATTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAGCTTGGCGATATTCTGTACGATGTTTCGCCTGGAATGAATTGTGGCTTTGCACAAGATGT
GGCAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTCAACAAGCGTGCCATCTTAACCCCAGATGTGGACTCAATGTTAAAGAGTATCGAGGATTCAT
GA
mRNA sequenceShow/hide mRNA sequence
GACAAAATCTCTGTATTCAAAGAACGAACGAAGTTCTTTGAAACCTATTTTCTGTGCTATTCATCTGGGACGACTCTTAGATAGTAAAAAAGATTTGGACGAACCTTTGA
CAACAAATAGCCATGGAGCAAAATCCGTCCAATCGAGCTCCCCGAAGGAAGATGAAGTTTATTCCAAAAGCACAGGCTCCTCGTATACCAAAACCTGAAGTCAAAGAAGA
ATTAGCCGAGGAAGACGTTTCCGCTCAAGCCAAGAATATACTAAAAATGTTCGATGAAAATGCCAAGAGGAAAAAGCAGAAAATTGGAAAAAAAGCCGCACCTACACAAG
TTGCATTTGGTTCTGGAGGTACATCAAGCACCTTACGATCATATGGTCTTCAAAAAATTGTAAATGGACCCAGAAATGAAGATGGAACTCTTCCGTCTAGTAGAACCAAG
GAGTATGTGGAACCATGGGATCATTACAGTAATTATCCTGTAACTCTTCCTTTACGGGAACGATATTTAGGAAATCCAGAATCTCTTAACGAGGAAGAATTTGGCGAGGC
TTCAGAAAACAGAACATACGATGAAAATGCAACAACTCCTGCAGTGGATCTTGGTCTAATGGAGGAGAGACCAGAAACAAAGATCTTTTTTCTACAATTGCCACCTATGA
TGCCTCTGATGAAGAAATCTTCTGCAATAGAAGTCATGGGGCCACCGCCACCCAAAAACTCGGAAAAAAGTGAAGGCTCACAACCTCAACAGAAAACCTGCTCACTGAAT
GAGTTACCTCCTGGCTCCATCGGTAAATTGCTTGTGTATAGGAGTGGTGCTGTCAAGTTAAAGCTTGGCGATATTCTGTACGATGTTTCGCCTGGAATGAATTGTGGCTT
TGCACAAGATGTGGCAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGAGAGCTCAACAAGCGTGCCATCTTAACCCCAGATGTGGACTCAATGTTAAAGAGTA
TCGAGGATTCATGATTAGTTTTCTCTGAAGATGGGATTTTTTCATAGACATCATAGCAGATAAATTGACGGGAATGATATTCTTTATTATAATTACAAGAGGAAATAACA
ACAAAAAATAGTATTAGAAAGAGATGCATTGGTTTAGAAAAAACAGAGTGACTATTTTCTCACTTGTTTAGCCATGAGTTCGTAGTTTTTTAAATTTATGAACGATGTCG
TGTGATTAGGTAGATCAATTATATTAATATCAATTTTGACAGAGTAATAATTCTCATTCTACTTGAGCGTCTTTGTTAGCTTACTAACCATTCATTGTCATTCTATTGCA
AATGTAAATTGTAAGCTGACGTGATTGAGATCTACTGAATAGGTTACATTCTTATCTTGCTAGGCTGACATTGGTGATTCATTCAAATATTAGATGATTAGCCGTATGTT
AGGATCTCACAAATGCCCCACATTGGAAAGTGGGAGAGTCCAACATCAATATAAAAGAGATATGGGTTATTCTCCTCATTGTCAATTGGTGAACTCTATATTCTCTAATT
CCGTGGTCACTTGAAAATTCTCACTTTGCATGATTATTGATTAAAAATAGCACTTGCAACGAAATCATTTGACTAGGAAATTCTTATCAGTTGCAGGGTAACAAGGTACA
GTACAAGGC
Protein sequenceShow/hide protein sequence
MEQNPSNRAPRRKMKFIPKAQAPRIPKPEVKEELAEEDVSAQAKNILKMFDENAKRKKQKIGKKAAPTQVAFGSGGTSSTLRSYGLQKIVNGPRNEDGTLPSSRTKEYVE
PWDHYSNYPVTLPLRERYLGNPESLNEEEFGEASENRTYDENATTPAVDLGLMEERPETKIFFLQLPPMMPLMKKSSAIEVMGPPPPKNSEKSEGSQPQQKTCSLNELPP
GSIGKLLVYRSGAVKLKLGDILYDVSPGMNCGFAQDVAAINVEGKHCCIVGELNKRAILTPDVDSMLKSIEDS