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Sed0019349 (gene) of Chayote v1 genome

Gene IDSed0019349
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase HOS1-like
Genome locationLG01:69306624..69308631
RNA-Seq ExpressionSed0019349
SyntenySed0019349
Gene Ontology termsGO:0006004 - fucose metabolic process (biological process)
GO:0009409 - response to cold (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR025151 - ELYS-like domain
IPR044718 - E3 ubiquitin-protein ligase HOS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036140.1 E3 ubiquitin-protein ligase HOS1 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-3185Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
XP_022958124.1 E3 ubiquitin-protein ligase HOS1-like [Cucurbita moschata]4.2e-3185Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
XP_022995656.1 E3 ubiquitin-protein ligase HOS1-like [Cucurbita maxima]1.2e-3083.75Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQK+LC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
XP_023522159.1 E3 ubiquitin-protein ligase HOS1-like, partial [Cucurbita pepo subsp. pepo]4.2e-3185Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
XP_023533438.1 E3 ubiquitin-protein ligase HOS1-like [Cucurbita pepo subsp. pepo]4.2e-3185Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
TrEMBL top hitse value%identityAlignment
A0A0A0KKX8 ELYS domain-containing protein8.5e-3080Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRK Y+EH+D  DNAQ KF   EDW+KILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
A0A5A7T8D9 O-fucosyltransferase family protein4.2e-2977.5Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDR+ Y+EH+D  DNA+ KF   EDW+KILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
A0A6J1DW09 E3 ubiquitin-protein ligase HOS13.8e-3081.25Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRKKYEEH+D +DNAQ KF   EDWVKILVTEIC+LCIR+NFVDRMIELPWNS EEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
A0A6J1H466 E3 ubiquitin-protein ligase HOS1-like2.0e-3185Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQKMLC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
A0A6J1K2I0 E3 ubiquitin-protein ligase HOS1-like5.9e-3183.75Show/hide
Query:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
        MYQK+LC+  RDRKKYEE +D  DNAQSKF R EDWVKILVTEICFLCIR+NFVDRMIELPWNSDEEKHLHKCL EWS A
Subjt:  MYQKMLCH--RDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAA
SwissProt top hitse value%identityAlignment
Q84JU6 E3 ubiquitin-protein ligase HOS11.1e-1052.46Show/hide
Query:  DWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAAIRQRLLDVASLCTIF
        +W++ILV E C L IR+N VDR+IELPWN DEEK+LH+CL +  +A       V SL  +F
Subjt:  DWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAAIRQRLLDVASLCTIF
Arabidopsis top hitse value%identityAlignment
AT2G39810.1 ubiquitin-protein ligases7.9e-1252.46Show/hide
Query:  DWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAAIRQRLLDVASLCTIF
        +W++ILV E C L IR+N VDR+IELPWN DEEK+LH+CL +  +A       V SL  +F
Subjt:  DWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAAIRQRLLDVASLCTIF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACCAGAAAATGCTATGCCATAGGGATAGGAAAAAGTACGAAGAACACGATGACGTTATAGACAATGCTCAAAGCAAATTTAACAGGCGGGAGGACTGGGTGAAAAT
ATTGGTGACTGAAATTTGTTTTCTTTGTATCCGTCAAAACTTTGTGGATAGAATGATCGAGTTACCATGGAATTCGGATGAGGAAAAGCATCTCCACAAGTGCTTGCAAG
AGTGGTCCGCTGCCATCCGTCAACGACTATTGGATGTTGCCTCTTTGTGTACTATCTTCAGCACACTTTCATTGTTTTGGACAAGGAATTGGTTGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACCAGAAAATGCTATGCCATAGGGATAGGAAAAAGTACGAAGAACACGATGACGTTATAGACAATGCTCAAAGCAAATTTAACAGGCGGGAGGACTGGGTGAAAAT
ATTGGTGACTGAAATTTGTTTTCTTTGTATCCGTCAAAACTTTGTGGATAGAATGATCGAGTTACCATGGAATTCGGATGAGGAAAAGCATCTCCACAAGTGCTTGCAAG
AGTGGTCCGCTGCCATCCGTCAACGACTATTGGATGTTGCCTCTTTGTGTACTATCTTCAGCACACTTTCATTGTTTTGGACAAGGAATTGGTTGAATTAAAGGTTTGTG
AAGCTATGTATGAGAGGAATTTGCATACTCTTCTTATTCATTCAAGTGAAGTAATATACATATTTATACAAGAAAGTTGTAAACTAACCTCCCTAATAATAGAATGTAAA
CTAACCTCTCTAATTATAGAATGTAGACTAACTTAATTAAGTTAGAGAAATTAGAGAAATAGAAGGAGAAATAAAAGGGGTAGACTCAACTACCTTGACTTTCTACACTC
CCCCTCAAGCTGGACAATATATGCTTCGCATGCTGAGCTTGGATATTAATCCACCAAGACTAGGTCAATGAAGTTCCTTGGTCA
Protein sequenceShow/hide protein sequence
MYQKMLCHRDRKKYEEHDDVIDNAQSKFNRREDWVKILVTEICFLCIRQNFVDRMIELPWNSDEEKHLHKCLQEWSAAIRQRLLDVASLCTIFSTLSLFWTRNWLN