CuGenDBv2

Gene ID	Sed0019373
Organism	Sechium edule (Chayote v1)
Description	histone-lysine N-methyltransferase SETD1A
Genome location	LG06:40163475..40164341
RNA-Seq Expression	Sed0019373
Synteny	Sed0019373
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601423.1 hypothetical protein SDJN03_06656, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-37

61.49

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Query:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN-----------------QNKEI----------TVLDSDS
        + SKRQR +E+QMEE+   E+LKRQKSY+QI+SLLEEEEEE +EDLSSII++LQQEISS +                 Q  E+          +V D  S
Subjt:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN-----------------QNKEI----------TVLDSDS

Query:  NCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
         CC  S    EEE GE+ERVMRHLLEASDDELGIPN+EF+VG GVD VA CDA WELEDEAANYYTLFHSQLFM
Subjt:  NCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

KAG7032206.1 hypothetical protein SDJN02_06249, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.0e-37

60.45

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Query:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN--------------------QNKEI----------TVLD
        + SKRQR +E+QMEE+   E+LKRQKSY+QI+SLLEEEEEE +EDLSSII++LQQEISS +                    Q  E+          +V D
Subjt:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN--------------------QNKEI----------TVLD

Query:  SDSNCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
          S CC  S    EEE GE+ERVMRHLLEASDDELGIPN+EF+VG GVD VA CDA WELEDEAANYYTLFHSQLFM
Subjt:  SDSNCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

XP_022944959.1 uncharacterized protein LOC111449340 [Cucurbita moschata]

4.1e-37

63.87

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Query:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI----------TVLDSDSNCCSKD--REEEEDGEKERV
        + SKR R+E +  +EI +LKRQKSY QI+SLL+E+EEEP+ DLSSIITTLQQEISSP+  +            +V  S S+  S D  +E EE+GE ERV
Subjt:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI----------TVLDSDSNCCSKD--REEEEDGEKERV

Query:  MRHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM
        MRHLL+ASDDELGIP  EFLVG GV+ V  FCDAFWELEDEAANYYTLF SQLFM
Subjt:  MRHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM

XP_022968627.1 uncharacterized protein LOC111467789 [Cucurbita maxima]

2.4e-37

64.29

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Query:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI---------TVLDSDSNCCSKD--REEEEDGEKERVM
        + SKR R+E +  +EI +LKRQKSY QI+SLL+E+EEEP+ DLSSIITTLQQEISSP+  +           +V  S S+  S D  +E EE+GE ERVM
Subjt:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI---------TVLDSDSNCCSKD--REEEEDGEKERVM

Query:  RHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM
        RHLL+ASDDELGIP  EFLVG GV+ V  FCDAFWELEDEAANYYTLF SQLFM
Subjt:  RHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM

XP_022987613.1 uncharacterized protein LOC111485117 [Cucurbita maxima]

2.7e-36

58.15

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Query:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN---------------------------QNKEI-------
        + SKRQR +E+QMEE+   E++KRQKSYNQI+SLLEEEEEE +EDLSSII++LQQEISS +                           Q  E+       
Subjt:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN---------------------------QNKEI-------

Query:  ---TVLDSDSNCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
           +V D  S CC  S    EEE GE+ERVMRHLLEASDDELGIPN+EF+VG GVD VA CDA WELEDEAANYYTLFHSQLFM
Subjt:  ---TVLDSDSNCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

TrEMBL top hits

e value

%identity

Alignment

A0A5D3D3N5 Histone-lysine N-methyltransferase SETD1A

8.6e-33

56.5

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Query:  LTSKRQRE--EESQMEEIEDLKRQKSYNQIVSLL---EEEEEEPMEDLSSIITTLQQEISSP------------NQNKEITVLDSDSN------------
        + SKRQR   E   + E E+LKRQKSYNQI+SLL   EE+EEE ++DLSSIITTLQQEISSP              +  +++ D  S+            
Subjt:  LTSKRQRE--EESQMEEIEDLKRQKSYNQIVSLL---EEEEEEPMEDLSSIITTLQQEISSP------------NQNKEITVLDSDSN------------

Query:  -----CCSKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVG-GGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
             C     E EEDGE+E+VMRHLLEASDDELGIPN EF VG  GVD VA CDA WELEDEAANYYTLF SQLFM
Subjt:  -----CCSKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVG-GGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

A0A6J1FZL9 uncharacterized protein LOC111449340

2.0e-37

63.87

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Query:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI----------TVLDSDSNCCSKD--REEEEDGEKERV
        + SKR R+E +  +EI +LKRQKSY QI+SLL+E+EEEP+ DLSSIITTLQQEISSP+  +            +V  S S+  S D  +E EE+GE ERV
Subjt:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI----------TVLDSDSNCCSKD--REEEEDGEKERV

Query:  MRHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM
        MRHLL+ASDDELGIP  EFLVG GV+ V  FCDAFWELEDEAANYYTLF SQLFM
Subjt:  MRHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM

A0A6J1H1H5 uncharacterized protein LOC111458717

2.2e-36

58.66

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Query:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN----------------------QNKEI----------TV
        + SKRQR +E+QMEE+   E+LKRQKSY+QI+SLLEEEEEE +EDLSSII++LQQEISS +                      Q  E+          +V
Subjt:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN----------------------QNKEI----------TV

Query:  LDSDSNCCSKDR--EEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
         D  S CCS      EEE GE+ERVMRHLLEASDDELGIPN+EF+VG G+D VA CDA WELEDEAANYYTLFHSQLF+
Subjt:  LDSDSNCCSKDR--EEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

A0A6J1HU13 uncharacterized protein LOC111467789

1.2e-37

64.29

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Query:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI---------TVLDSDSNCCSKD--REEEEDGEKERVM
        + SKR R+E +  +EI +LKRQKSY QI+SLL+E+EEEP+ DLSSIITTLQQEISSP+  +           +V  S S+  S D  +E EE+GE ERVM
Subjt:  LTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI---------TVLDSDSNCCSKD--REEEEDGEKERVM

Query:  RHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM
        RHLL+ASDDELGIP  EFLVG GV+ V  FCDAFWELEDEAANYYTLF SQLFM
Subjt:  RHLLEASDDELGIPNAEFLVGGGVDDV-AFCDAFWELEDEAANYYTLFHSQLFM

A0A6J1JJY7 uncharacterized protein LOC111485117

1.3e-36

58.15

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Query:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN---------------------------QNKEI-------
        + SKRQR +E+QMEE+   E++KRQKSYNQI+SLLEEEEEE +EDLSSII++LQQEISS +                           Q  E+       
Subjt:  LTSKRQREEESQMEEI---EDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPN---------------------------QNKEI-------

Query:  ---TVLDSDSNCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
           +V D  S CC  S    EEE GE+ERVMRHLLEASDDELGIPN+EF+VG GVD VA CDA WELEDEAANYYTLFHSQLFM
Subjt:  ---TVLDSDSNCC--SKDREEEEDGEKERVMRHLLEASDDELGIPNAEFLVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26920.1 unknown protein

1.7e-25

50.91

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Query:  KRQREEESQMEEIEDLKRQK--------SYNQIVSLLEEEEEEPM--EDLSSIITTLQQEISSPNQ----NKEITVLDSDSNCCSKDREEEEDGEKERVM
        KR RE+E+ +EE E  KRQK        SYNQI+ LL + +E+     DL+S I  LQQEISS +Q    ++   V DS S+C S   EE ED  KE+VM
Subjt:  KRQREEESQMEEIEDLKRQK--------SYNQIVSLLEEEEEEPM--EDLSSIITTLQQEISSPNQ----NKEITVLDSDSNCCSKDREEEEDGEKERVM

Query:  RHLLEASDDELGIPNAEF------------LVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM
        +HLLEASDDELGIPN +F            + G  + D  F DAFWELEDEAANYYTL  S+LFM
Subjt:  RHLLEASDDELGIPNAEF------------LVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

AT1G69760.1 unknown protein

8.5e-25

47.4

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Query:  KRQREEESQ--MEEIEDLKRQK------SYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI---------TVLDSDSNCCSKDREEEEDGEKE
        KRQR+E+ Q  ++  E+ KRQK      SYNQ+++LL++E E    D++S+ITTLQQEIS+  QN  +         +   S S+C SK  E+E DG+KE
Subjt:  KRQREEESQ--MEEIEDLKRQK------SYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEI---------TVLDSDSNCCSKDREEEEDGEKE

Query:  RVMRHLLEASDDELGIPNAEFLVGGG-------------VDDVAFCDAF----WELEDEAANYYTLFHSQLFM
        +VM+HLLEA+DDELGIPN EF  GG              V+  +  D F    WELEDEAANYYTL  S+LFM
Subjt:  RVMRHLLEASDDELGIPNAEFLVGGG-------------VDDVAFCDAF----WELEDEAANYYTLFHSQLFM

Sequences

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CDS sequence

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ATGGCTGGATTGACATCAAAACGCCAAAGGGAAGAAGAATCCCAAATGGAAGAAATTGAAGATCTTAAAAGGCAAAAATCATACAACCAAATAGTGTCCCTTTTGGAGGA
AGAAGAGGAGGAGCCAATGGAGGATTTGTCCTCAATCATCACAACCCTCCAACAAGAAATCTCATCTCCAAATCAAAACAAGGAAATTACTGTTTTAGACTCTGATTCCA
ATTGTTGTTCTAAGGATAGGGAAGAGGAGGAAGATGGGGAAAAGGAGAGGGTGATGAGGCATCTTCTAGAAGCTTCTGATGATGAACTTGGGATTCCAAATGCTGAGTTT
TTGGTTGGGGGTGGAGTGGATGATGTGGCCTTTTGTGATGCTTTCTGGGAGTTGGAAGATGAGGCTGCTAATTATTATACCTTGTTTCACTCTCAGCTTTTTATGTAG

mRNA sequence

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TTTTCTTTTATTGTTGGCCACATTAAAAAAATATCTCCCTTGTCCTCCAAATTTTGACCTCAAAGCTCTTCACTTTTCCTCTATTTAAGCCTCCCATCCTCAACTCTCTC
TCCTCATCTCCCTCTTAGCCTTACACATATATCCTTTTCTTTATTCTCTCTTTAAAACAAAAAAAAAAAAAAAAAACCAATGGCTGGATTGACATCAAAACGCCAAAGGG
AAGAAGAATCCCAAATGGAAGAAATTGAAGATCTTAAAAGGCAAAAATCATACAACCAAATAGTGTCCCTTTTGGAGGAAGAAGAGGAGGAGCCAATGGAGGATTTGTCC
TCAATCATCACAACCCTCCAACAAGAAATCTCATCTCCAAATCAAAACAAGGAAATTACTGTTTTAGACTCTGATTCCAATTGTTGTTCTAAGGATAGGGAAGAGGAGGA
AGATGGGGAAAAGGAGAGGGTGATGAGGCATCTTCTAGAAGCTTCTGATGATGAACTTGGGATTCCAAATGCTGAGTTTTTGGTTGGGGGTGGAGTGGATGATGTGGCCT
TTTGTGATGCTTTCTGGGAGTTGGAAGATGAGGCTGCTAATTATTATACCTTGTTTCACTCTCAGCTTTTTATGTAGTTTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTGCTCTTTTATGGAAGGGATATTAAATTATAGGAGTAAATTTAATGTTAGAATTTGAAAAAGTGGAAAAAGAGAAGAGGGATTTGATTGAAACACAGGGTGTTT
GAGTTTAACATCTCTGTGATATCTCTCTTTCTTTAATGGAATGAGAAGTCTCCCATTTTAATCATCTTACAATGAAATCAACACTCCGAACCCCAAC

Protein sequence

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MAGLTSKRQREEESQMEEIEDLKRQKSYNQIVSLLEEEEEEPMEDLSSIITTLQQEISSPNQNKEITVLDSDSNCCSKDREEEEDGEKERVMRHLLEASDDELGIPNAEF
LVGGGVDDVAFCDAFWELEDEAANYYTLFHSQLFM

Sed0019373 (gene) of Chayote v1 genome