; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019381 (gene) of Chayote v1 genome

Gene IDSed0019381
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat
Genome locationLG04:2692696..2693856
RNA-Seq ExpressionSed0019381
SyntenySed0019381
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588516.1 Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.6e-10769.67Show/hide
Query:  AMAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPP
        AMA R+ +A++VAC +I+S P          NHHFR             N+L A+SSSSE NKINTK+NFSIS+SD DE+DD R    +E  KT+N PPP
Subjt:  AMAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPP

Query:  YDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAP
        YDPFSK P+ EE +DPKNLQEIFHKM+TDG L+NA KMFDE+SK GLTHEALQLF++IKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLRMLASGV P
Subjt:  YDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAP

Query:  NAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
        NAYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY A+FEALVRD KVDEARE LVQ+EAKGFV NEKDV+E+L  KRGRGPL RTL+NILF K
Subjt:  NAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

KAG6588578.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]6.2e-10669.16Show/hide
Query:  AMAKRVAQAILVACNSISSLPP---------NHHFRI-------------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNR-PEYAQESA
        AMA RV +A+LVAC +I+S P          NHHFR                    N+L A+SSSSE NKINTK+NFSIS+SD DE+DD R     +E  
Subjt:  AMAKRVAQAILVACNSISSLPP---------NHHFRI-------------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNR-PEYAQESA

Query:  KTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLR
        K++N PPPYDPFSK P+ EE +DPKNLQEIFHKM+TDG L+NA KMFDELSK GLTHEALQLF+QIKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLR
Subjt:  KTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLR

Query:  MLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRT
        MLASGV PNAYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEALVRD KV+EARE LVQ+EAKGFV NEKDV+E+L  KRGRGPLFRT
Subjt:  MLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRT

Query:  LVNILFGK
        L+NILF K
Subjt:  LVNILFGK

XP_022931685.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]9.6e-10770Show/hide
Query:  AMAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPP
        AMA R+ +A+LVAC +I+S P          NHHFR             N+L A+SSSSE NKINTK+NFSI +SD DE+DD R    +E  KT+N PPP
Subjt:  AMAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPP

Query:  YDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAP
        YDPFSK P+ EE +DPKNLQEIFHKM+TDG L+NA KMFDE+SK GLTHEALQLF++IKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLRMLASGV P
Subjt:  YDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAP

Query:  NAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
         AYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEALVRD KVDEARE LVQ+EAKGFV NEKDV+E+L  KRGRGPLFRTL+NILF K
Subjt:  NAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

XP_022969848.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]6.0e-10971.24Show/hide
Query:  MAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPPY
        MA R+ +A+LVAC +I+S P          NHHFR             N+L A+SSSSE NKINTK+NFSIS+SD DE+DD R    +E  KT+N PPPY
Subjt:  MAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPPY

Query:  DPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPN
        DPFSK P+ EE +DPKNLQEIFHKM+TDG L+NAAKMFDE+SK GLTHEALQLF++IKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
        AYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEALVRD KVDEARE LVQ+EAKGFVANEKDV+E+L  KRGRGPLFRTL+NILF K
Subjt:  AYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

XP_023530438.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita pepo subsp. pepo]1.8e-10569.57Show/hide
Query:  MAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPPY
        MA R+ +A+LVAC +I+S P          NHHFR             N+L A+SSSSE NKINTK+NFSIS+SD DE++D R    +E  KT+N PPPY
Subjt:  MAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPPY

Query:  DPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPN
        DPFSK P+ EE  DPKNLQEIFHKM+TDG L+NA KMFD +SK GLTHEALQLF++IKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
        AYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEALVRD KVDEAR  LVQ+EAKGFV NEKDV+E+L  KRGRGPLFRTL+NILF K
Subjt:  AYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

TrEMBL top hitse value%identityAlignment
A0A2P5D8B1 Tetratricopeptide-like helical domain containing protein1.9e-8463.71Show/hide
Query:  HHFRINKLLAFSSSSEPN-KINTKLNFSISNSDDEDDDNRPEYA---QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDE
        H+  + +LL+ S +  PN KINTK+NFS+S+SDD+D+D+R +      E+      PPPYDPF+K P+ EEP DP++LQE+FHKM+TDGLL+NA KMFD 
Subjt:  HHFRINKLLAFSSSSEPN-KINTKLNFSISNSDDEDDDNRPEYA---QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDE

Query:  LSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTY
        LSK GLTHEAL+LF+QIKD+G++PDVVAHTAV+EAYA AGQ+KEA KV+LRMLA+GVAPNAYTYSVLV+GL  DPKF+G+AK  ++EMM KG++PNAGTY
Subjt:  LSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTY

Query:  VAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
         AVFEA  R+ K +EAREFL Q+  +GFV +EK VREVL  K  RGP+FR++++ILFGK
Subjt:  VAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

A0A2P5DRC1 Pentatricopeptide repeat5.9e-8663.33Show/hide
Query:  ACNSISSLPPNHHFRINKLLAFSSSSEPN-KINTKLNFSISNSDDEDDDNRPEYA---QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDG
        A   +  LPP H+  + +LL+ S +  PN KINTK+NFS+S+SDD+D+D+R + A    E+      PPPYDPF+K P+ EEP DP++LQE+FHKM+TDG
Subjt:  ACNSISSLPPNHHFRINKLLAFSSSSEPN-KINTKLNFSISNSDDEDDDNRPEYA---QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDG

Query:  LLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMM
        LL+NA KMFD LSK GLTHEAL+LF+QIKD+G++PDVVAHTAV+EAYA AGQ+KEA KV+LRMLA+GVAPNAYTYSVLV+GL  DPKF+G+AK  ++EMM
Subjt:  LLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMM

Query:  GKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
         KG+RPNAGTY  VFEA  R+ K +EAREFL Q+  +GFV +EK VREVL  K  RGP+FR+++NILFGK
Subjt:  GKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

A0A6J1DUN8 pentatricopeptide repeat-containing protein At4g38150-like7.7e-9472.33Show/hide
Query:  NKLLAFSSSSEPNKINTKLNFSISNSDDEDDDNRPEYAQESA---KTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGL
        N  L  SSSSE NKINTK+NFSIS+SD++DDD+   + Q  A        PPPYDPFSK P+ EEP+DPKNLQEIFHKM+TDGL ++A KMFD LSK G 
Subjt:  NKLLAFSSSSEPNKINTKLNFSISNSDDEDDDNRPEYAQESA---KTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGL

Query:  THEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEA
        THEALQLF+ IK++GH+PDVVAHTAVIEAY  AGQ KEAHKVYLRMLASGV PNAYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEA
Subjt:  THEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEA

Query:  LVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
        L R+ +V+EAREF+ Q+EAKGFVANEKDV+EVL  KR RGPLFRTL+NILF K
Subjt:  LVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

A0A6J1F064 pentatricopeptide repeat-containing protein At4g38150-like4.6e-10770Show/hide
Query:  AMAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPP
        AMA R+ +A+LVAC +I+S P          NHHFR             N+L A+SSSSE NKINTK+NFSI +SD DE+DD R    +E  KT+N PPP
Subjt:  AMAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPP

Query:  YDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAP
        YDPFSK P+ EE +DPKNLQEIFHKM+TDG L+NA KMFDE+SK GLTHEALQLF++IKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLRMLASGV P
Subjt:  YDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAP

Query:  NAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
         AYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEALVRD KVDEARE LVQ+EAKGFV NEKDV+E+L  KRGRGPLFRTL+NILF K
Subjt:  NAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

A0A6J1I251 pentatricopeptide repeat-containing protein At4g38150-like2.9e-10971.24Show/hide
Query:  MAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPPY
        MA R+ +A+LVAC +I+S P          NHHFR             N+L A+SSSSE NKINTK+NFSIS+SD DE+DD R    +E  KT+N PPPY
Subjt:  MAKRVAQAILVACNSISSLPP---------NHHFRI------------NKLLAFSSSSEPNKINTKLNFSISNSD-DEDDDNRPEYAQESAKTQNPPPPY

Query:  DPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPN
        DPFSK P+ EE +DPKNLQEIFHKM+TDG L+NAAKMFDE+SK GLTHEALQLF++IKD+GH+PDVVAHTAVIEAY  AGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
        AYTY+VL++GL  DPKFVG+AK  LLEMMG+GLRPNAGTY AVFEALVRD KVDEARE LVQ+EAKGFVANEKDV+E+L  KRGRGPLFRTL+NILF K
Subjt:  AYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK

SwissProt top hitse value%identityAlignment
O81028 Pentatricopeptide repeat-containing protein At2g26790, mitochondrial2.9e-1336.36Show/hide
Query:  FDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALL---LEMMGKGLR
        FD LSK G   EA +L  ++KD+G +PDV+ +T +I+ Y   G+  +A  +   M+ +G++P+  TY+VLV GL  +    G+ + +L     M  +G +
Subjt:  FDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALL---LEMMGKGLR

Query:  PNAGTYVAVFEALVRDGKVDEAREFLVQLEAK
        PNA T   + E L    KV EA +F   LE K
Subjt:  PNAGTYVAVFEALVRDGKVDEAREFLVQLEAK

Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial2.4e-1235.77Show/hide
Query:  EALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALV
        EA +LF ++  +G  PD V  T +I  Y  AG  K+A +V+  M+ +G +PN  TY+ L+ GL  +   + +A  LL EM   GL+PN  TY ++   L 
Subjt:  EALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALV

Query:  RDGKVDEAREFLVQLEAKGFVAN
        + G ++EA + + + EA G  A+
Subjt:  RDGKVDEAREFLVQLEAKGFVAN

Q8S8P6 Pentatricopeptide repeat-containing protein At2g326305.8e-1432.48Show/hide
Query:  QEIFHKMKTDGLLSNAA--KMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPK
        Q +F  M+    LS  +   + D   K+G   EA +LF ++  +G  P+ + +  +I AY   G+ KEA K+   M A+G+ P++YTY+ L+ G  +   
Subjt:  QEIFHKMKTDGLLSNAA--KMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPK

Query:  FVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEK
         V  A  L  EM  KGL  N+ TY  +   L + GK DEA     +++ KG+  + K
Subjt:  FVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEK

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655601.1e-1228.49Show/hide
Query:  KDPKNLQEIFHKMKTDGLLSNA---AKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVR
        KD  +  ++F++M   G   N      +   L       EA+ LF ++KD    P V  +T +I++  G+ +  EA  +   M  +G+ PN +TY+VL+ 
Subjt:  KDPKNLQEIFHKMKTDGLLSNA---AKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVR

Query:  GLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEG
         L    KF   A+ LL +M+ KGL PN  TY A+     + G +++A + +  +E++    N +   E+++G
Subjt:  GLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381509.2e-2837.82Show/hide
Query:  QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHK
        Q+S +T  P    + + + P+      P++  EIF KMK  GL+ NA  M D L K GL  EA++LF  ++D+G IP+VV +TAV+EA+  A + ++A +
Subjt:  QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHK

Query:  VYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLE
        ++ +M  +G+APNA++Y VLV+GL  +   + +A A   EM+  G  PN  T+V + +AL R   V++A+  +  L  KGF  N K V+E ++
Subjt:  VYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLE

Arabidopsis top hitse value%identityAlignment
AT2G26790.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-1436.36Show/hide
Query:  FDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALL---LEMMGKGLR
        FD LSK G   EA +L  ++KD+G +PDV+ +T +I+ Y   G+  +A  +   M+ +G++P+  TY+VLV GL  +    G+ + +L     M  +G +
Subjt:  FDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALL---LEMMGKGLR

Query:  PNAGTYVAVFEALVRDGKVDEAREFLVQLEAK
        PNA T   + E L    KV EA +F   LE K
Subjt:  PNAGTYVAVFEALVRDGKVDEAREFLVQLEAK

AT2G32630.1 Pentatricopeptide repeat (PPR-like) superfamily protein4.1e-1532.48Show/hide
Query:  QEIFHKMKTDGLLSNAA--KMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPK
        Q +F  M+    LS  +   + D   K+G   EA +LF ++  +G  P+ + +  +I AY   G+ KEA K+   M A+G+ P++YTY+ L+ G  +   
Subjt:  QEIFHKMKTDGLLSNAA--KMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPK

Query:  FVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEK
         V  A  L  EM  KGL  N+ TY  +   L + GK DEA     +++ KG+  + K
Subjt:  FVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEK

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein6.5e-2937.82Show/hide
Query:  QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHK
        Q+S +T  P    + + + P+      P++  EIF KMK  GL+ NA  M D L K GL  EA++LF  ++D+G IP+VV +TAV+EA+  A + ++A +
Subjt:  QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHK

Query:  VYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLE
        ++ +M  +G+APNA++Y VLV+GL  +   + +A A   EM+  G  PN  T+V + +AL R   V++A+  +  L  KGF  N K V+E ++
Subjt:  VYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLE

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein6.5e-2937.82Show/hide
Query:  QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHK
        Q+S +T  P    + + + P+      P++  EIF KMK  GL+ NA  M D L K GL  EA++LF  ++D+G IP+VV +TAV+EA+  A + ++A +
Subjt:  QESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHK

Query:  VYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLE
        ++ +M  +G+APNA++Y VLV+GL  +   + +A A   EM+  G  PN  T+V + +AL R   V++A+  +  L  KGF  N K V+E ++
Subjt:  VYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLE

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein6.2e-8061.98Show/hide
Query:  SSEPNKINTKLNFSISNSDDEDDDNRPEYAQESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQI
        SSE  ++NTK+NFS+S+ DD D++   +  ++S K + PPPPYDPFSK P  EEP+DPKNLQEIFHKM+T+G  + A KMFD LSK G THEAL+LF+QI
Subjt:  SSEPNKINTKLNFSISNSDDEDDDNRPEYAQESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMKTDGLLSNAAKMFDELSKQGLTHEALQLFAQI

Query:  KDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAR
        KD+  +PDVVAHTA++EAYA AGQ+KE  KV++RMLASGV+PNAYTYSVL++GL  D K   +AK  LLEMMG G+ PNA TY AVFEA VR+GK + AR
Subjt:  KDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPNAGTYVAVFEALVRDGKVDEAR

Query:  EFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK
        E L +++ KGFV +EK VRE LE KRG+  +FRT++N+LF K
Subjt:  EFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGCGAACTCGCTATGGCGAAGAGAGTAGCTCAAGCCATCCTCGTCGCCTGCAACTCCATTTCTTCATTACCTCCGAATCATCATTTCCGCATCAACAAATTACT
CGCCTTCTCCTCATCCTCAGAACCCAACAAAATCAACACCAAACTCAATTTCTCAATCTCAAACTCCGACGACGAAGACGACGACAATCGGCCTGAATACGCTCAAGAAT
CAGCCAAAACCCAGAACCCACCACCACCATACGACCCCTTCAGCAAGAACCCAATCGCAGAAGAACCAAAAGACCCAAAAAACCTGCAAGAAATCTTCCACAAGATGAAG
ACAGATGGTCTCTTAAGCAATGCAGCCAAGATGTTCGACGAATTGTCCAAGCAAGGCCTAACCCACGAGGCGCTGCAACTCTTCGCCCAAATCAAAGACCAGGGTCACAT
TCCTGATGTTGTTGCCCACACGGCCGTGATCGAAGCCTACGCCGGTGCCGGTCAGAGCAAAGAAGCTCACAAGGTATATTTGCGAATGCTTGCTTCTGGGGTTGCCCCAA
ATGCTTATACTTACTCTGTTCTTGTTAGGGGACTTGTTGTTGACCCTAAGTTTGTGGGCAATGCCAAGGCCTTGTTGCTGGAAATGATGGGTAAGGGATTGAGACCCAAT
GCTGGGACTTATGTTGCTGTTTTTGAGGCTCTTGTGAGGGATGGGAAAGTGGATGAGGCTAGAGAGTTTTTGGTGCAATTGGAGGCTAAGGGGTTTGTGGCTAATGAGAA
GGATGTTAGGGAGGTTCTTGAGGGTAAAAGAGGAAGAGGGCCTTTGTTTAGGACTCTTGTTAACATTCTGTTTGGTAAGTAG
mRNA sequenceShow/hide mRNA sequence
GTTGGATACCGATTTTCAAGTTCAAATTCGTCGTGGAGTTGAAATTGATTGATACCGAACAAGATGACCGACTACTTAATGGGTGTTTAGGTAGCAAAATTAACATTATA
AGAACAGTTGAGAGCGATAATTTAGGGCATGTGCAGCGAACTCGCTATGGCGAAGAGAGTAGCTCAAGCCATCCTCGTCGCCTGCAACTCCATTTCTTCATTACCTCCGA
ATCATCATTTCCGCATCAACAAATTACTCGCCTTCTCCTCATCCTCAGAACCCAACAAAATCAACACCAAACTCAATTTCTCAATCTCAAACTCCGACGACGAAGACGAC
GACAATCGGCCTGAATACGCTCAAGAATCAGCCAAAACCCAGAACCCACCACCACCATACGACCCCTTCAGCAAGAACCCAATCGCAGAAGAACCAAAAGACCCAAAAAA
CCTGCAAGAAATCTTCCACAAGATGAAGACAGATGGTCTCTTAAGCAATGCAGCCAAGATGTTCGACGAATTGTCCAAGCAAGGCCTAACCCACGAGGCGCTGCAACTCT
TCGCCCAAATCAAAGACCAGGGTCACATTCCTGATGTTGTTGCCCACACGGCCGTGATCGAAGCCTACGCCGGTGCCGGTCAGAGCAAAGAAGCTCACAAGGTATATTTG
CGAATGCTTGCTTCTGGGGTTGCCCCAAATGCTTATACTTACTCTGTTCTTGTTAGGGGACTTGTTGTTGACCCTAAGTTTGTGGGCAATGCCAAGGCCTTGTTGCTGGA
AATGATGGGTAAGGGATTGAGACCCAATGCTGGGACTTATGTTGCTGTTTTTGAGGCTCTTGTGAGGGATGGGAAAGTGGATGAGGCTAGAGAGTTTTTGGTGCAATTGG
AGGCTAAGGGGTTTGTGGCTAATGAGAAGGATGTTAGGGAGGTTCTTGAGGGTAAAAGAGGAAGAGGGCCTTTGTTTAGGACTCTTGTTAACATTCTGTTTGGTAAGTAG
ATTATGGGAATTTTCTAGAGATATATGGTGTTTACTCATCTTTTTGTGATTGTGCTTTTGTTACCTACCTCCATAATTTGCAAGTTCTAGTTTTATGGGGTTTTGTTTTG
CTGGTAAGGATGACCCTTTTTTGCGGCTCAAACGAAATACAACTTGGTTTTTGAAAATAAC
Protein sequenceShow/hide protein sequence
MCSELAMAKRVAQAILVACNSISSLPPNHHFRINKLLAFSSSSEPNKINTKLNFSISNSDDEDDDNRPEYAQESAKTQNPPPPYDPFSKNPIAEEPKDPKNLQEIFHKMK
TDGLLSNAAKMFDELSKQGLTHEALQLFAQIKDQGHIPDVVAHTAVIEAYAGAGQSKEAHKVYLRMLASGVAPNAYTYSVLVRGLVVDPKFVGNAKALLLEMMGKGLRPN
AGTYVAVFEALVRDGKVDEAREFLVQLEAKGFVANEKDVREVLEGKRGRGPLFRTLVNILFGK