CuGenDBv2

Gene ID	Sed0019383
Organism	Sechium edule (Chayote v1)
Description	Large proline-rich protein BAG6 isoform X2
Genome location	LG01:18300323..18305367
RNA-Seq Expression	Sed0019383
Synteny	Sed0019383
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591237.1 hypothetical protein SDJN03_13583, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-37

79.82

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   + KKPL L+ANALKRKDSFIQFFAMTGI LLS+RS+GQKYRIHDLQEDT AL+QE ++LIDRM +IKRSLLHEASLDSTGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LF+ ED
Subjt:  LRILFSDED

XP_022142735.1 uncharacterized protein LOC111012778 [Momordica charantia]

3.3e-39

82.57

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   L KKPLGL+ANALKRKDSFIQFFAMTGI LLS+RS+GQKYRIHDLQEDT+AL+QEH++LIDRM +IKRSLLHEASLD TG FASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFSDED
Subjt:  LRILFSDED

XP_022936518.1 uncharacterized protein LOC111443106 [Cucurbita moschata]

3.1e-37

79.82

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   + KKPL L+ANALKRKDSFIQFFAMTGI LLS+RS+GQKYRIHDLQEDT AL+QE ++L+DRM +IKRSLLHEASLDSTGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFS ED
Subjt:  LRILFSDED

XP_022975908.1 uncharacterized protein LOC111476471 [Cucurbita maxima]

8.9e-37

78.9

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   + KKPL L+ANALKRKDSFIQFFAM+GI LLS+RS+GQKYRIHDLQEDT AL+QE ++LIDRM +IKRSLLHEASLDSTGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFS +D
Subjt:  LRILFSDED

XP_023535555.1 uncharacterized protein LOC111796960 [Cucurbita pepo subsp. pepo]

1.4e-37

80.73

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   + KKPL L+ANALKRKDSFIQFFAMTGI LLS+RS+GQKYRIHDLQEDT AL+QE ++LIDRM +IKRSLLHEASLDSTGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFS ED
Subjt:  LRILFSDED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5S3 Uncharacterized protein

7.4e-37

78.9

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SS P   +SKKPLGLYANALKRKDSFIQ  AMTGI LLS RS+GQKYRI+DLQEDT AL+QEH++L+DRM +IKRSLLHEASL+STG FASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFSDED
Subjt:  LRILFSDED

A0A1S3BW63 uncharacterized protein LOC103493794

2.6e-34

74.31

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SS P   +SKKPLG YAN LK KD  IQ  AMTGI LLS RS+GQKYRI++LQEDT AL+QEH++L+DRM +IKRSLLHEASL+STGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFSDED
Subjt:  LRILFSDED

A0A6J1CMC7 uncharacterized protein LOC111012778

1.6e-39

82.57

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   L KKPLGL+ANALKRKDSFIQFFAMTGI LLS+RS+GQKYRIHDLQEDT+AL+QEH++LIDRM +IKRSLLHEASLD TG FASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFSDED
Subjt:  LRILFSDED

A0A6J1FDG4 uncharacterized protein LOC111443106

1.5e-37

79.82

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   + KKPL L+ANALKRKDSFIQFFAMTGI LLS+RS+GQKYRIHDLQEDT AL+QE ++L+DRM +IKRSLLHEASLDSTGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFS ED
Subjt:  LRILFSDED

A0A6J1IKL0 uncharacterized protein LOC111476471

4.3e-37

78.9

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Query:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR
        MAPS PS SSAP   + KKPL L+ANALKRKDSFIQFFAM+GI LLS+RS+GQKYRIHDLQEDT AL+QE ++LIDRM +IKRSLLHEASLDSTGLFASR
Subjt:  MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASR

Query:  LRILFSDED
        LR+LFS +D
Subjt:  LRILFSDED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G20430.1 unknown protein

2.2e-25

56.31

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Query:  PSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASRLRILF
        P     P  +L+    G + N  K K SF QF AMTGI LLS RS+ QKYRIHDL+EDTA L++E  SL DRM+ IK  LLH+AS+DS+G+FASRLR+LF
Subjt:  PSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASRLRILF

Query:  SDE
         ++
Subjt:  SDE

Sequences

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CDS sequence

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ATGGCGCCTTCACCTCCATCAAACTCCTCAGCTCCTAATCTCTCATTGTCGAAAAAACCCCTTGGTTTATACGCCAACGCTCTCAAACGCAAGGACAGCTTCATTCAGTT
CTTCGCCATGACTGGTATTTTCCTTCTAAGCATCCGATCCATGGGTCAGAAGTACCGAATCCACGACCTTCAAGAGGACACTGCGGCTCTCCAACAAGAACACCAATCCC
TAATCGACCGTATGAACAGCATCAAGCGCAGCCTCCTCCACGAGGCATCACTCGATTCCACCGGCCTCTTCGCTTCCAGGCTTCGGATTCTCTTCAGCGATGAAGATTGA

mRNA sequence

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GTTCTTTGTGCAAGTCCACCTTTTTTTGGGGTTTGTTAGGGGTTTTACTCTTACAGTTCTTCCATGGCGCCTTCACCTCCATCAAACTCCTCAGCTCCTAATCTCTCATT
GTCGAAAAAACCCCTTGGTTTATACGCCAACGCTCTCAAACGCAAGGACAGCTTCATTCAGTTCTTCGCCATGACTGGTATTTTCCTTCTAAGCATCCGATCCATGGGTC
AGAAGTACCGAATCCACGACCTTCAAGAGGACACTGCGGCTCTCCAACAAGAACACCAATCCCTAATCGACCGTATGAACAGCATCAAGCGCAGCCTCCTCCACGAGGCA
TCACTCGATTCCACCGGCCTCTTCGCTTCCAGGCTTCGGATTCTCTTCAGCGATGAAGATTGATGGCTTTCACTCTTCATTCTCTGCAGGTTCCTGTAACTTTGCCGCTT
ATTGGGGTATCAGTTTGCTTTGCTTGGCTTGGCGTTTTGGTTTCAATAATGCTCAAGAGGAGAGGTTGGCAGCTGTCTGTGGGTCAGCCTTGTTTATATTTGTTTATAGT
CATAATTTGAACTTATTATTATTTGGTTTTAGCGCCTTTTGCAGAACAATGTTTTCAAATTCTAGATTTGACCCTTCATTTCCTTTTTTTCTCATAACAGTACCTTTCTG
TTGCTTTTGGGGACCTCTTTATGCTCAAAATGGTTTTCTTGTTGCCTAATCTCTGCAAATATTTTGTCTTTTGATTTGTTTCTTTATGTGAATTTAAAAACACTCGGCGG
ATATAATACCCTCCAGAAAACTAAGGTTGTGTTCGGGTCTCGCTTTATATAAGCGTCCAAGTTGGTTATAATAATCCAACTCGTGTTTGTCCCATTGTTTATGATAGTTG
ATG

Protein sequence

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MAPSPPSNSSAPNLSLSKKPLGLYANALKRKDSFIQFFAMTGIFLLSIRSMGQKYRIHDLQEDTAALQQEHQSLIDRMNSIKRSLLHEASLDSTGLFASRLRILFSDED

Sed0019383 (gene) of Chayote v1 genome