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Sed0019400 (gene) of Chayote v1 genome

Gene IDSed0019400
OrganismSechium edule (Chayote v1)
DescriptionC2 domain-containing protein
Genome locationContig00303_ERROPOS193979:64131..65087
RNA-Seq ExpressionSed0019400
SyntenySed0019400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032442.1 faeA, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2256.45Show/hide
Query:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK
        L YNSS+STLIPN H +R +     R  F GK+     RV P  R G SSFRCF +  T           +RPPFDINLAVILAGFAFEAYT+P E FGK
Subjt:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK

Query:  REVDAAGCTTVFLSQLRLPYVKEL
        REVDAAGC TVFLS+    +V+E+
Subjt:  REVDAAGCTTVFLSQLRLPYVKEL

XP_022155152.1 uncharacterized protein LOC111022292 [Momordica charantia]1.8e-2356.9Show/hide
Query:  LPYNSSISTLIPNPHR------SRFLRPTFWGKSS----RVLPLRRTGGSSFRCFCTT-----------ATQRPPFDINLAVILAGFAFEAYTTPPEFFG
        LPYNSS S L+PN  +      SR LRP F G++     R+ P  R G SSFRC C T             +RPPFDINLAVILAGFAFEAYT+PPE FG
Subjt:  LPYNSSISTLIPNPHR------SRFLRPTFWGKSS----RVLPLRRTGGSSFRCFCTT-----------ATQRPPFDINLAVILAGFAFEAYTTPPEFFG

Query:  KREVDAAGCTTVFLSQ
        + EVDAAGCTTV+LS+
Subjt:  KREVDAAGCTTVFLSQ

XP_022933070.1 uncharacterized protein LOC111439777 isoform X1 [Cucurbita moschata]1.1e-2256.45Show/hide
Query:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK
        L YNSS+STLIPN H +R +     R  F GK+     RV P  R G SSFRCF +  T           +RPPFDINLAVILAGFAFEAYT+P E FGK
Subjt:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK

Query:  REVDAAGCTTVFLSQLRLPYVKEL
        REVDAAGC TVFLS+    +V+E+
Subjt:  REVDAAGCTTVFLSQLRLPYVKEL

XP_023530237.1 uncharacterized protein LOC111792861 isoform X1 [Cucurbita pepo subsp. pepo]3.0e-2357.26Show/hide
Query:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK
        L YNSS+STLIPN H +R +     R  F GK+     RV P  R G SSFRCF +T T           +RPPFDINLAVILAGFAFEAYT+P E FGK
Subjt:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK

Query:  REVDAAGCTTVFLSQLRLPYVKEL
        REVDAAGC TVFLS+    +V+E+
Subjt:  REVDAAGCTTVFLSQLRLPYVKEL

XP_023530246.1 uncharacterized protein LOC111792861 isoform X2 [Cucurbita pepo subsp. pepo]3.0e-2357.26Show/hide
Query:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK
        L YNSS+STLIPN H +R +     R  F GK+     RV P  R G SSFRCF +T T           +RPPFDINLAVILAGFAFEAYT+P E FGK
Subjt:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK

Query:  REVDAAGCTTVFLSQLRLPYVKEL
        REVDAAGC TVFLS+    +V+E+
Subjt:  REVDAAGCTTVFLSQLRLPYVKEL

TrEMBL top hitse value%identityAlignment
A0A1S3CCU0 uncharacterized protein LOC103499378 isoform X13.3e-2052.31Show/hide
Query:  MASLPYN---SSISTLIPNPHRSRFLRPT----FWGKSSRVLPLR-----RTGGSSFRCFCTTA-----------TQRPPFDINLAVILAGFAFEAYTTP
        MASL  N   SS+S+ IPN   +  L P+     +    RVL  R     R G SSFRCFC++            T+R PFDINLAVILAGFAFEAYT+P
Subjt:  MASLPYN---SSISTLIPNPHRSRFLRPT----FWGKSSRVLPLR-----RTGGSSFRCFCTTA-----------TQRPPFDINLAVILAGFAFEAYTTP

Query:  PEFFGKREVDAAGCTTVFLSQLRLPYVKEL
        PE FGKREVDAAGCTTV+LS+    +V+E+
Subjt:  PEFFGKREVDAAGCTTVFLSQLRLPYVKEL

A0A5A7UEA7 Multiple C2 and transmembrane domain-containing protein 13.3e-2052.31Show/hide
Query:  MASLPYN---SSISTLIPNPHRSRFLRPT----FWGKSSRVLPLR-----RTGGSSFRCFCTTA-----------TQRPPFDINLAVILAGFAFEAYTTP
        MASL  N   SS+S+ IPN   +  L P+     +    RVL  R     R G SSFRCFC++            T+R PFDINLAVILAGFAFEAYT+P
Subjt:  MASLPYN---SSISTLIPNPHRSRFLRPT----FWGKSSRVLPLR-----RTGGSSFRCFCTTA-----------TQRPPFDINLAVILAGFAFEAYTTP

Query:  PEFFGKREVDAAGCTTVFLSQLRLPYVKEL
        PE FGKREVDAAGCTTV+LS+    +V+E+
Subjt:  PEFFGKREVDAAGCTTVFLSQLRLPYVKEL

A0A6J1DNK8 uncharacterized protein LOC1110222928.5e-2456.9Show/hide
Query:  LPYNSSISTLIPNPHR------SRFLRPTFWGKSS----RVLPLRRTGGSSFRCFCTT-----------ATQRPPFDINLAVILAGFAFEAYTTPPEFFG
        LPYNSS S L+PN  +      SR LRP F G++     R+ P  R G SSFRC C T             +RPPFDINLAVILAGFAFEAYT+PPE FG
Subjt:  LPYNSSISTLIPNPHR------SRFLRPTFWGKSS----RVLPLRRTGGSSFRCFCTT-----------ATQRPPFDINLAVILAGFAFEAYTTPPEFFG

Query:  KREVDAAGCTTVFLSQ
        + EVDAAGCTTV+LS+
Subjt:  KREVDAAGCTTVFLSQ

A0A6J1F3W8 uncharacterized protein LOC111439777 isoform X15.5e-2356.45Show/hide
Query:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK
        L YNSS+STLIPN H +R +     R  F GK+     RV P  R G SSFRCF +  T           +RPPFDINLAVILAGFAFEAYT+P E FGK
Subjt:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCFCTTAT-----------QRPPFDINLAVILAGFAFEAYTTPPEFFGK

Query:  REVDAAGCTTVFLSQLRLPYVKEL
        REVDAAGC TVFLS+    +V+E+
Subjt:  REVDAAGCTTVFLSQLRLPYVKEL

A0A6J1JUL3 uncharacterized protein LOC111489848 isoform X15.5e-2356.45Show/hide
Query:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCF-----------CTTATQRPPFDINLAVILAGFAFEAYTTPPEFFGK
        L YNSS+STLIPN H +R       R  F GK+     RV P  R G SSFRCF           C   ++RPPFDINLAVILAGFAFEAYT+P E FGK
Subjt:  LPYNSSISTLIPNPHRSRFL-----RPTFWGKSS----RVLPLRRTGGSSFRCF-----------CTTATQRPPFDINLAVILAGFAFEAYTTPPEFFGK

Query:  REVDAAGCTTVFLSQLRLPYVKEL
        REVDAAGC TVFLS+    +V+E+
Subjt:  REVDAAGCTTVFLSQLRLPYVKEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCTTCCCTACAATTCTTCAATCTCCACTCTGATTCCCAACCCTCACCGGAGCCGTTTCCTCCGACCCACGTTTTGGGGGAAATCGTCTAGGGTTTTGCCTCT
ACGCCGCACCGGAGGATCCTCGTTTCGCTGCTTCTGCACAACAGCAACTCAACGCCCGCCTTTCGATATCAATCTCGCCGTCATTCTTGCCGGCTTCGCCTTTGAAGCAT
ACACCACCCCCCCTGAATTTTTTGGGAAGCGTGAAGTTGACGCTGCTGGCTGTACCACTGTGTTTCTTTCACAACTAAGACTGCCTTATGTAAAAGAGCTTGGAAAGACT
ATAGTAATTTCTTCTTCCATTACAACCATTTGGGAATTATGTTTGGTAAGAGAATCCCTTTGCCTTTGTTGGACTTTACTCGTCCTTTGTTCGATAAGTAAACGCTGGAT
GTCGTCGATGTTCTTTCCTTTTTGTCTTGAGATGAGGATTCTTATTGTTGGTGTATCCTTGTTCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCTTCCCTACAATTCTTCAATCTCCACTCTGATTCCCAACCCTCACCGGAGCCGTTTCCTCCGACCCACGTTTTGGGGGAAATCGTCTAGGGTTTTGCCTCT
ACGCCGCACCGGAGGATCCTCGTTTCGCTGCTTCTGCACAACAGCAACTCAACGCCCGCCTTTCGATATCAATCTCGCCGTCATTCTTGCCGGCTTCGCCTTTGAAGCAT
ACACCACCCCCCCTGAATTTTTTGGGAAGCGTGAAGTTGACGCTGCTGGCTGTACCACTGTGTTTCTTTCACAACTAAGACTGCCTTATGTAAAAGAGCTTGGAAAGACT
ATAGTAATTTCTTCTTCCATTACAACCATTTGGGAATTATGTTTGGTAAGAGAATCCCTTTGCCTTTGTTGGACTTTACTCGTCCTTTGTTCGATAAGTAAACGCTGGAT
GTCGTCGATGTTCTTTCCTTTTTGTCTTGAGATGAGGATTCTTATTGTTGGTGTATCCTTGTTCGTCTGA
Protein sequenceShow/hide protein sequence
MASLPYNSSISTLIPNPHRSRFLRPTFWGKSSRVLPLRRTGGSSFRCFCTTATQRPPFDINLAVILAGFAFEAYTTPPEFFGKREVDAAGCTTVFLSQLRLPYVKELGKT
IVISSSITTIWELCLVRESLCLCWTLLVLCSISKRWMSSMFFPFCLEMRILIVGVSLFV