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Sed0019401 (gene) of Chayote v1 genome

Gene IDSed0019401
OrganismSechium edule (Chayote v1)
Descriptionribonuclease P protein subunit p38
Genome locationLG11:30803114..30805540
RNA-Seq ExpressionSed0019401
SyntenySed0019401
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579150.1 hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia]8.6e-7484.48Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSSGPVAVVQSK NED     SYEGERLD+LLQSIQREIK++R LNA+SLPEKIWLKKQFA+GVNEVTRVLERM PS DSA ++NPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QAILLTADCNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIKANGS VNQLIGEILQ+TT
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
XP_022938626.1 ribonuclease P protein subunit p38 [Cucurbita moschata]1.0e-7485.06Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSSGPVAVVQSK NED     SYEGERLD+LLQSIQREIK++R LNA+SLPEKIWLKKQFA+GVNEVTRVLERM PSGDSA ++NPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QAILLTADCNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIKANGS VNQLIGEILQ+TT
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
XP_022993803.1 ribonuclease P protein subunit p38 [Cucurbita maxima]1.0e-7184.48Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSSGPVAVVQSK NED     SYEGERLD+LLQSIQREIK++R LNADSLPEKIWLKKQFA+GVNEVTRVLERM PS DSA  MNPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QAILLTADCNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIK NGS VNQLIGEIL +TT
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
XP_023549838.1 ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo]2.5e-7383.33Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSSGPVAVVQSK NED     SYEGERLD+LLQSIQREIK++R LNA++LPEKIWLKKQFA+GVNEVTRVLERM PS DSA ++NPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QAILLTADCNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ+TT
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]1.0e-7182.18Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSS P AV+QSKPNED     SYEGERLD+ LQSIQREIK +R LNA+SLPEKIWLKKQFA+GVNEVTRVLERM PSGDSA +MNPNYKACT+KL
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QA+LLTA+CNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIKANGS VNQLI EILQ+ T
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
TrEMBL top hitse value%identityAlignment
A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X52.2e-6779.89Show/hide
Query:  MGKKPKSSG-PVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIK
        MGK PKSS  PVA +QSKP ED    SSYEGERLD+LL SIQREIK +R LNA+SLPEK WLKKQFA+GVNEVTR LERM P GDSA +MNPNYKAC +K
Subjt:  MGKKPKSSG-PVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIK

Query:  LQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQT
        LQAILLTA+CNPRWLTNHVP LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIK+NGS VNQLI EILQ+T
Subjt:  LQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQT
A0A1S3CR39 ribonuclease P protein subunit p38 isoform X68.4e-6779.31Show/hide
Query:  MGKKPKSSG-PVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIK
        MGK PKSS  PVA +QSKP ED     SYEGERLD+LL SIQREIK +R LNA+SLPEK WLKKQFA+GVNEVTR LERM P GDSA +MNPNYKAC +K
Subjt:  MGKKPKSSG-PVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIK

Query:  LQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQT
        LQAILLTA+CNPRWLTNHVP LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIK+NGS VNQLI EILQ+T
Subjt:  LQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQT
A0A6J1CZ90 ribonuclease P protein subunit p389.9e-6877.46Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSS    VV+SK ++DC     YEG+RLD+LLQSIQREIK++R+LNA+SLP KIWLKKQFAVGVNEVTRVLERM PSGDSA +MNPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQT
        QAILL  DCNPRWLTNH+P LA SR VPL+L++ KEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ T
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQT
A0A6J1FDN9 ribonuclease P protein subunit p384.9e-7585.06Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSSGPVAVVQSK NED     SYEGERLD+LLQSIQREIK++R LNA+SLPEKIWLKKQFA+GVNEVTRVLERM PSGDSA ++NPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QAILLTADCNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIKANGS VNQLIGEILQ+TT
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
A0A6J1K3C5 ribonuclease P protein subunit p385.1e-7284.48Show/hide
Query:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL
        MGKK KSSGPVAVVQSK NED     SYEGERLD+LLQSIQREIK++R LNADSLPEKIWLKKQFA+GVNEVTRVLERM PS DSA  MNPNYKACT++L
Subjt:  MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKL

Query:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
        QAILLTADCNPRWLTNHVP+LA SR VPLILV+ KEGSLRLGELVNLKTAIAIGIK NGS VNQLIGEIL +TT
Subjt:  QAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT
SwissProt top hitse value%identityAlignment
P78345 Ribonuclease P protein subunit p385.7e-0431.63Show/hide
Query:  LKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKAN
        ++KQ A+GVNEVTR LER                    +L  +L+     P  +T+H+  L+ SR VP   V     S R+  ++ LK  +A+  K N
Subjt:  LKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKAN
Q32LC1 Ribonuclease P protein subunit p385.7e-0430.91Show/hide
Query:  LKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGS
        ++KQ A+G+NEVTR LER                    +L   L      P  +T+H+  L+ SR VP   V     S RL  ++ LK  +A+G K N +
Subjt:  LKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCNPRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGS

Query:  SVNQLIGEIL
        +  + +  IL
Subjt:  SVNQLIGEIL
Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein3.0e-4059.72Show/hide
Query:  YEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCNPRWLTNHVPNLATSRMV
        YEGERL  LL  IQR I+ S++ N +SLPEKIWLKKQ A+G+NEVTRVLERM P+  S    NP       +LQ ++L ADC PR LT H+PNLA SR V
Subjt:  YEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCNPRWLTNHVPNLATSRMV

Query:  PLILVR-GKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEIL
        P++ VR  K  SLRLGELV LKTA+AIGIKA G+ +N L+ +IL
Subjt:  PLILVR-GKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEIL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAACCTAAATCTTCTGGTCCTGTTGCAGTCGTTCAATCCAAGCCTAACGAAGACTGTTGTTTTCGCAGTTCGTATGAAGGGGAACGTCTCGATCAATTGCT
ACAGTCGATTCAGAGGGAGATAAAGAAATCAAGAGTTCTGAATGCGGATTCCTTGCCGGAAAAGATTTGGCTTAAGAAACAATTTGCTGTTGGAGTTAATGAGGTTACTA
GAGTTCTTGAACGGATGGCCCCAAGTGGAGATTCTGCTCATGTTATGAACCCTAATTATAAGGCGTGTACAATTAAGCTTCAGGCTATACTGTTAACAGCTGATTGCAAC
CCTCGATGGCTGACGAACCATGTGCCGAACTTGGCGACATCTAGAATGGTACCGCTGATACTCGTGAGAGGTAAAGAGGGATCTTTAAGGTTAGGTGAACTGGTTAACCT
TAAAACAGCAATTGCAATTGGTATAAAGGCGAATGGGAGCTCTGTTAATCAACTTATTGGTGAAATTCTTCAACAAACAACATAA
mRNA sequenceShow/hide mRNA sequence
AATAAGCCAAGTTGGTGGGCAGAGCAGTGGTTTGTGCTACTTCATCTTCTTCCGGTACGGTGTTCGTTCAATCGGAGAAACCCACTGCAATTTCTCTCAAGGCTTGGAAT
CTGCAAGTTTGGATCAAGTTTTCAATCATGGGAAAGAAACCTAAATCTTCTGGTCCTGTTGCAGTCGTTCAATCCAAGCCTAACGAAGACTGTTGTTTTCGCAGTTCGTA
TGAAGGGGAACGTCTCGATCAATTGCTACAGTCGATTCAGAGGGAGATAAAGAAATCAAGAGTTCTGAATGCGGATTCCTTGCCGGAAAAGATTTGGCTTAAGAAACAAT
TTGCTGTTGGAGTTAATGAGGTTACTAGAGTTCTTGAACGGATGGCCCCAAGTGGAGATTCTGCTCATGTTATGAACCCTAATTATAAGGCGTGTACAATTAAGCTTCAG
GCTATACTGTTAACAGCTGATTGCAACCCTCGATGGCTGACGAACCATGTGCCGAACTTGGCGACATCTAGAATGGTACCGCTGATACTCGTGAGAGGTAAAGAGGGATC
TTTAAGGTTAGGTGAACTGGTTAACCTTAAAACAGCAATTGCAATTGGTATAAAGGCGAATGGGAGCTCTGTTAATCAACTTATTGGTGAAATTCTTCAACAAACAACAT
AAAAATATGTTTTTTTGACTTGTGAGTATAGCAAGGTTTTCTGCTGTACAGTATATATATGATATGAAATAGAAGCAAATTCTTGTCCTCTACCCTTTATCTGTATGAGA
TTTCTAGTTTTGTTAATTTCACAAGAAGTAGATTTGTGCTGATTCATTCTAGATAATGGTATATGATTGGAAAGGTAGC
Protein sequenceShow/hide protein sequence
MGKKPKSSGPVAVVQSKPNEDCCFRSSYEGERLDQLLQSIQREIKKSRVLNADSLPEKIWLKKQFAVGVNEVTRVLERMAPSGDSAHVMNPNYKACTIKLQAILLTADCN
PRWLTNHVPNLATSRMVPLILVRGKEGSLRLGELVNLKTAIAIGIKANGSSVNQLIGEILQQTT