; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019419 (gene) of Chayote v1 genome

Gene IDSed0019419
OrganismSechium edule (Chayote v1)
DescriptionCASP-like protein
Genome locationLG01:22593254..22595996
RNA-Seq ExpressionSed0019419
SyntenySed0019419
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006702 - Casparian strip membrane protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134193.1 CASP-like protein 4D1 [Momordica charantia]9.6e-5170.73Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTF+LI ISLLI ATN+K ++K  E + K  +KDVY+YRY+ + AVIGAAL+L+QI  T+Y+VV+KSDGTP  D+FSDK+L+YL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL++ +K+ L GN FNSFFDKG+A+AAILLLAFIC+A++SILSSLAL+RKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

XP_022954145.1 CASP-like protein 4D1 [Cucurbita moschata]1.7e-4770.73Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTFILI ISL+INATN+K   K  E +  F +KDVY+YRY++S  VIGA L+L+QI   IY VV+KS  T + D+FSDK+LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL+   KE L GN  NSFFDKGNA+AA+LLLAFICAA++SILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

XP_022990642.1 CASP-like protein 4D1 [Cucurbita maxima]4.5e-4871.34Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTFILI ISLLINATN+K L K  E + KF +KDVY+YRY++S  +IGA L+L+QI   IY VV+KS  T + D+FSDK+LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL+   KE L GN  NSF DKGNA+AA+LLLAFICAA++SILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

XP_023525049.1 CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]1.3e-4770.12Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTFILI ISL+INATN+K   K  + + KF +KDVY+YRY++S  +IGA L+L+QI   IY VV+KS  T + D+FSDK+LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL+   KE L GN  NSFFDKGNA+AA+LLLAFICAA++SILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

XP_038877614.1 CASP-like protein 4D1 [Benincasa hispida]2.8e-5073.91Show/hide
Query:  SKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYLLLS
        SKGSRIASLILRILTFILI ++LLI ATN+K +++    + K  +KDV +YRY+V+VAVIG AL+L+QI  TIY++V+K DGTP+ DLFSDK+LSYLLLS
Subjt:  SKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYLLLS

Query:  GASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        GASAGLGAGID++  FKE L GNFFNSFFDKG+AAAAILLLAFICAAI+SILSSLALIRKP
Subjt:  GASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

TrEMBL top hitse value%identityAlignment
A0A6J1C1A4 CASP-like protein4.7e-5170.73Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTF+LI ISLLI ATN+K ++K  E + K  +KDVY+YRY+ + AVIGAAL+L+QI  T+Y+VV+KSDGTP  D+FSDK+L+YL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL++ +K+ L GN FNSFFDKG+A+AAILLLAFIC+A++SILSSLAL+RKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

A0A6J1GRM4 CASP-like protein8.2e-4870.73Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTFILI ISL+INATN+K   K  E +  F +KDVY+YRY++S  VIGA L+L+QI   IY VV+KS  T + D+FSDK+LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL+   KE L GN  NSFFDKGNA+AA+LLLAFICAA++SILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

A0A6J1HET3 CASP-like protein7.7e-4665.24Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTFILI ISL+INATN+K L K  E + K  +K+VY+YRY+++ AVIG  L+LIQI+ +IY++V+KS+GTP+  LFSD +LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLS +SA LGAGID++A  KE LFG  F+SFFD+G+ AAA+L +AF+CAA++SILS+LALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

A0A6J1JJD2 CASP-like protein2.2e-4871.34Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIASLILRILTFILI ISLLINATN+K L K  E + KF +KDVY+YRY++S  +IGA L+L+QI   IY VV+KS  T + D+FSDK+LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLSGASAGLGAGIDL+   KE L GN  NSF DKGNA+AA+LLLAFICAA++SILSSLALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

A0A6J1JSF8 CASP-like protein1.4e-4464.63Show/hide
Query:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL
        M  SKGSRIA+LILRILT ILI ISL+INA+N+K L K  E + K  +K+VY+YRY+++ AVIG  L+LIQI+ +IY++V+KS+GTP+  LFSD +LSYL
Subjt:  MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYL

Query:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        LLS +SA LGAGID +A  KE LFG  F+SFFD+G+ AAA+LL+AFICAA++SILS+LALIRKP
Subjt:  LLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

SwissProt top hitse value%identityAlignment
B9NBE5 CASP-like protein 4D11.4e-2040.85Show/hide
Query:  SRIASLILRILTFILILISLLINATNT-KILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKS------DGTPILDLFSDKILSY
        SR+ +L LR+LTF  +++SL+I  TNT  I + +DE KV+   KD Y+YRY+++    G   T++QI  T+ ++  ++      DG  + D + DK++SY
Subjt:  SRIASLILRILTFILILISLLINATNT-KILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKS------DGTPILDLFSDKILSY

Query:  LLLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK
        +L +GA+A  GA  +LK      L G   + FF+KG A+A++LLL F+C AILS+ SS AL +K
Subjt:  LLLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK

B9SXY8 CASP-like protein 4D11.6e-2746.91Show/hide
Query:  SKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVS-----KSDGTPILDLFSDKILS
        S  SR+A+LILRILTFI ++ SL+I  TNT  L +LD  +VK  +KDVYAYRY+++  VIG A T++QI  T+YYV +       DG    D F DK++S
Subjt:  SKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVS-----KSDGTPILDLFSDKILS

Query:  YLLLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLAL
        Y+L++GA+AG  +  D+K  F  +     F++F +KG A+A++LL+ F+C A+LS+ SS AL
Subjt:  YLLLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLAL

C6T1Z6 CASP-like protein 4D14.4e-2243.11Show/hide
Query:  SKGSRIASLILRILTFILILISLLINATNTKILVKL--DETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVS-----KSDGTPILDLFSDKI
        S GSR   L+LR+LTF+ +LI+L++ A     +VK   DET V+  + D+YAYRY++S  +IG A  L+Q+  +I+ VVS       DG  + D F DKI
Subjt:  SKGSRIASLILRILTFILILISLLINATNTKILVKL--DETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVS-----KSDGTPILDLFSDKI

Query:  LSYLLLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK
        +SYLL+SG++AG G  ++L         G   NSF DK NA+A++LL+AF+  A+ S  +S AL +K
Subjt:  LSYLLLSGASAGLGAGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK

Q56X75 CASP-like protein 4D22.0e-1940.37Show/hide
Query:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI--YYVVSKSDGTPILDLFSDKILSYLLLSGA
        ++  L+LR+LT + ++I+L+I +TN+  +V    + +KF +KDVYAYRY++S AVIG    +IQ+  TI  +    K+     LD + DK++SYL+ +G+
Subjt:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI--YYVVSKSDGTPILDLFSDKILSYLLLSGA

Query:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK
        +AG G   DLK TF   +     +  + FF KG A+A++LL AFIC A+LS+ SS A+ ++
Subjt:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK

Q8GWD5 CASP-like protein 4D12.0e-1939.51Show/hide
Query:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI-YYVVSKSDG-TPILDLFSDKILSYLLLSGA
        R   L+LR+LT   +LI++++ +TNT + +++  T +K  + DVYAYRY++S AVIG    ++Q+  TI  +   K+   T   D + DK++SYLL +G+
Subjt:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI-YYVVSKSDG-TPILDLFSDKILSYLLLSGA

Query:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        +AG G   DLK T+   +     +  + FF KG A+A++LL AF+  A+LS+ SSLAL ++P
Subjt:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP

Arabidopsis top hitse value%identityAlignment
AT2G39518.1 Uncharacterised protein family (UPF0497)1.4e-2040.37Show/hide
Query:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI--YYVVSKSDGTPILDLFSDKILSYLLLSGA
        ++  L+LR+LT + ++I+L+I +TN+  +V    + +KF +KDVYAYRY++S AVIG    +IQ+  TI  +    K+     LD + DK++SYL+ +G+
Subjt:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI--YYVVSKSDGTPILDLFSDKILSYLLLSGA

Query:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK
        +AG G   DLK TF   +     +  + FF KG A+A++LL AFIC A+LS+ SS A+ ++
Subjt:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRK

AT2G39530.1 Uncharacterised protein family (UPF0497)1.4e-2039.51Show/hide
Query:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI-YYVVSKSDG-TPILDLFSDKILSYLLLSGA
        R   L+LR+LT   +LI++++ +TNT + +++  T +K  + DVYAYRY++S AVIG    ++Q+  TI  +   K+   T   D + DK++SYLL +G+
Subjt:  RIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTI-YYVVSKSDG-TPILDLFSDKILSYLLLSGA

Query:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP
        +AG G   DLK T+   +     +  + FF KG A+A++LL AF+  A+LS+ SSLAL ++P
Subjt:  SAGLGAGIDLKATFKETL---FGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATTCAAAAGGTTCAAGAATTGCTTCACTTATATTGAGAATTTTAACCTTCATTTTGATATTAATTTCTCTGCTAATCAATGCTACTAATACTAAGATTTTGGT
CAAATTGGATGAGACTAAGGTAAAATTCACGTATAAAGATGTCTATGCCTATCGTTATGTAGTATCGGTTGCTGTTATTGGAGCTGCTTTGACTCTGATTCAAATTGTTC
GAACCATTTACTATGTTGTTTCTAAAAGTGATGGAACTCCCATACTTGATTTGTTTAGCGATAAGATATTGTCGTACCTTCTATTATCGGGCGCCTCGGCAGGCTTAGGC
GCAGGGATTGATTTGAAGGCCACATTTAAAGAAACATTATTTGGAAACTTTTTCAACTCATTCTTCGACAAGGGTAATGCTGCAGCTGCTATTCTTCTCCTTGCGTTTAT
TTGTGCTGCCATTCTCTCTATTCTCTCTTCATTGGCCCTCATCAGAAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
GATAATTTGTAGAGAGAAAAATTGAAAGGAAAAGATGGGAGATTCAAAAGGTTCAAGAATTGCTTCACTTATATTGAGAATTTTAACCTTCATTTTGATATTAATTTCTC
TGCTAATCAATGCTACTAATACTAAGATTTTGGTCAAATTGGATGAGACTAAGGTAAAATTCACGTATAAAGATGTCTATGCCTATCGTTATGTAGTATCGGTTGCTGTT
ATTGGAGCTGCTTTGACTCTGATTCAAATTGTTCGAACCATTTACTATGTTGTTTCTAAAAGTGATGGAACTCCCATACTTGATTTGTTTAGCGATAAGATATTGTCGTA
CCTTCTATTATCGGGCGCCTCGGCAGGCTTAGGCGCAGGGATTGATTTGAAGGCCACATTTAAAGAAACATTATTTGGAAACTTTTTCAACTCATTCTTCGACAAGGGTA
ATGCTGCAGCTGCTATTCTTCTCCTTGCGTTTATTTGTGCTGCCATTCTCTCTATTCTCTCTTCATTGGCCCTCATCAGAAAACCCTAGATTATTATTATTAATTTCTCA
TGTGTTTTTTTAAATATTTTAGTGCCTATATTCACTTATTTCTTTCTATAACAGAATGTAAGAGTGATGGTTTGAACCTTTGTAGTAAATGTCTTGATATTATTCGTCGC
TTTATTCATTTTGTATTTATGTATCTCTTCAATATGTTGGAC
Protein sequenceShow/hide protein sequence
MGDSKGSRIASLILRILTFILILISLLINATNTKILVKLDETKVKFTYKDVYAYRYVVSVAVIGAALTLIQIVRTIYYVVSKSDGTPILDLFSDKILSYLLLSGASAGLG
AGIDLKATFKETLFGNFFNSFFDKGNAAAAILLLAFICAAILSILSSLALIRKP