CuGenDBv2

Gene ID	Sed0019454
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG11:1557013..1558199
RNA-Seq Expression	Sed0019454
Synteny	Sed0019454
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008456814.1 PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo]

1.5e-34

56.65

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Query:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI
        MA VILPPQDCLG GLR +GLVLS PL SRRN  P S   S NPNFN DD   CSGRRRR    G          RS VRE+STTA ++ ++LVMGQVKI
Subjt:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI

Query:  LKRGE---------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF
        LKRGE                      LESK E++DLVLGST RLGPDPDLMQKQV      +G+YAGSG  F
Subjt:  LKRGE---------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF

XP_022937911.1 uncharacterized protein LOC111444161 [Cucurbita moschata]

7.9e-36

61.45

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Query:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK
        VIL PQDCLGNGLR +GLVL SPPLKSRRN        SS NPNFN+DDA  CSGRRR           ++ GRS V ETST A +SP+NLVMGQVKILK
Subjt:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK

Query:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF
        RGE               LESK EDLDLVLGST RLGPDPDLMQKQ       V++GIYAGSG  F
Subjt:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF

XP_022965945.1 uncharacterized protein LOC111465671 [Cucurbita maxima]

7.9e-36

61.45

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Query:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK
        VIL PQDCLGNGLR +GLVL SPPLKSRRN        SS NPNFN+DDA  CSGRRR           ++ GRS V ETST A +SP+NLVMGQVKILK
Subjt:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK

Query:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF
        RGE               LESK EDLDLVLGST RLGPDPDLMQKQ       V++GIYAGSG  F
Subjt:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF

XP_023537567.1 uncharacterized protein LOC111798562 [Cucurbita pepo subsp. pepo]

2.1e-36

62.05

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Query:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK
        VIL PQDCLGNGLRR+GLVL SPPLKSRRN        SS NPNFN+DDA  CSGRRR           ++ GRS V ETST A +SP+NLVMGQVKILK
Subjt:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK

Query:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF
        RGE               LESK EDLDLVLGST RLGPDPDLMQKQ       V++GIYAGSG  F
Subjt:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF

XP_038890387.1 uncharacterized protein LOC120079968 [Benincasa hispida]

7.2e-37

58.14

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Query:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKP---RSSGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI
        MA VILPPQDCLG G R +GLVLSPPLKSRRN  P    SS NPNFN DD   CSGRRRR    G         GRS   E ST A +S +NL+MGQVKI
Subjt:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKP---RSSGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI

Query:  LKRGEA------------------LESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF
        LKRGE                   LESKG+D+DLVLGST RLGPDPDLMQKQ       V +GIYAGSG  F
Subjt:  LKRGEA------------------LESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LG41 Uncharacterized protein

1.6e-34

57.31

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Query:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI
        MA VILPPQDCLG GLR +GLVLS PL SRRN  P S   S NPN N  DA  CSGRRRR    G          RS VRE+STTA ++ R+LVMGQVKI
Subjt:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI

Query:  LKRGE-------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF
        LKRGE                    LESKGE++DLVLGST RLGPD DLMQKQV      +G+YAGSG  F
Subjt:  LKRGE-------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF

A0A1S3C5D8 uncharacterized protein LOC103496651

7.2e-35

56.65

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Query:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI
        MA VILPPQDCLG GLR +GLVLS PL SRRN  P S   S NPNFN DD   CSGRRRR    G          RS VRE+STTA ++ ++LVMGQVKI
Subjt:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI

Query:  LKRGE---------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF
        LKRGE                      LESK E++DLVLGST RLGPDPDLMQKQV      +G+YAGSG  F
Subjt:  LKRGE---------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF

A0A5A7VCB7 Uncharacterized protein

7.2e-35

56.65

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Query:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI
        MA VILPPQDCLG GLR +GLVLS PL SRRN  P S   S NPNFN DD   CSGRRRR    G          RS VRE+STTA ++ ++LVMGQVKI
Subjt:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRS---SGNPNFNRDDAICCSGRRRRVPMDG---------GRSGVRETSTTAAVSPRNLVMGQVKI

Query:  LKRGE---------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF
        LKRGE                      LESK E++DLVLGST RLGPDPDLMQKQV      +G+YAGSG  F
Subjt:  LKRGE---------------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQV-----SEGIYAGSGRCF

A0A6J1FBP4 uncharacterized protein LOC111444161

3.8e-36

61.45

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Query:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK
        VIL PQDCLGNGLR +GLVL SPPLKSRRN        SS NPNFN+DDA  CSGRRR           ++ GRS V ETST A +SP+NLVMGQVKILK
Subjt:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK

Query:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF
        RGE               LESK EDLDLVLGST RLGPDPDLMQKQ       V++GIYAGSG  F
Subjt:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF

A0A6J1HQ64 uncharacterized protein LOC111465671

3.8e-36

61.45

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Query:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK
        VIL PQDCLGNGLR +GLVL SPPLKSRRN        SS NPNFN+DDA  CSGRRR           ++ GRS V ETST A +SP+NLVMGQVKILK
Subjt:  VILPPQDCLGNGLRRRGLVL-SPPLKSRRN----PKPRSSGNPNFNRDDAICCSGRRRRVP--------MDGGRSGVRETSTTAAVSPRNLVMGQVKILK

Query:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF
        RGE               LESK EDLDLVLGST RLGPDPDLMQKQ       V++GIYAGSG  F
Subjt:  RGE--------------ALESKGEDLDLVLGSTHRLGPDPDLMQKQ-------VSEGIYAGSGRCF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02040.1 unknown protein

3.1e-06

31.25

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Query:  RNPKPRSSGNPNFNRDDAICCSGRRRRVPMDGGRSGVRETSTTAAVSPRNLVMGQVKILKRGEALESKG-------------------EDLDLVLGSTHR
        RNPKPR   N +           RR++ P          T   +  +  NLVM QVKILKRGE L +                     +D+DL++ +T+R
Subjt:  RNPKPRSSGNPNFNRDDAICCSGRRRRVPMDGGRSGVRETSTTAAVSPRNLVMGQVKILKRGEALESKG-------------------EDLDLVLGSTHR

Query:  LGPDPDLMQKQV
        +GP+P+++ KQ+
Subjt:  LGPDPDLMQKQV

AT4G32020.1 unknown protein

3.5e-05

31.72

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Query:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRSSGNPNFNRDDAICCSGRRRRVP--MDGGRSGVRETS-----TTAAVS------------PRNL
        M   +L PQDCL +            +K  RNP    S  P  NR      + R RR P      RS     +       AAVS               +
Subjt:  MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRSSGNPNFNRDDAICCSGRRRRVP--MDGGRSGVRETS-----TTAAVS------------PRNL

Query:  VMGQVKILKRGEALESKGEDLDLV---LGSTHRLGPDPDLMQKQV
         + QV+ILKRGE +  +  DL +    LGST R+GPDP L+  Q+
Subjt:  VMGQVKILKRGEALESKGEDLDLV---LGSTHRLGPDPDLMQKQV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGGCCGTGATTCTTCCGCCGCAGGATTGCCTCGGCAACGGGCTGCGCCGCCGTGGTCTGGTTCTATCTCCGCCCCTGAAATCCCGGCGAAACCCTAAACCTAGAAG
TTCCGGAAACCCTAACTTCAATCGCGACGATGCGATCTGTTGTTCCGGCAGGCGGAGGAGGGTTCCGATGGACGGCGGTCGGAGCGGGGTGAGAGAGACGTCGACCACGG
CGGCGGTTTCACCGAGGAATTTGGTTATGGGACAGGTCAAGATCCTGAAGCGTGGAGAGGCGTTGGAATCGAAGGGTGAGGATTTGGATCTGGTTTTGGGATCTACGCAT
CGGTTGGGTCCGGATCCTGATTTGATGCAGAAGCAGGTTTCGGAGGGGATCTATGCCGGATCTGGAAGATGTTTCGAGTTTCGAGCACAGATGGAACTGGGTGAAGTGAA
GGCAACATGA

mRNA sequence

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CAAACATGTCCTATATAAATCCCATTTCATTTATCTTAAAATAGAACGAAAACAAATATTAATTTTCCGTAACAATTTCTGTTTTTCTTCTTCTTCATTTTTCTCCGATT
TCGGGAAAAATCTGAATCAATGGCGGCCGTGATTCTTCCGCCGCAGGATTGCCTCGGCAACGGGCTGCGCCGCCGTGGTCTGGTTCTATCTCCGCCCCTGAAATCCCGGC
GAAACCCTAAACCTAGAAGTTCCGGAAACCCTAACTTCAATCGCGACGATGCGATCTGTTGTTCCGGCAGGCGGAGGAGGGTTCCGATGGACGGCGGTCGGAGCGGGGTG
AGAGAGACGTCGACCACGGCGGCGGTTTCACCGAGGAATTTGGTTATGGGACAGGTCAAGATCCTGAAGCGTGGAGAGGCGTTGGAATCGAAGGGTGAGGATTTGGATCT
GGTTTTGGGATCTACGCATCGGTTGGGTCCGGATCCTGATTTGATGCAGAAGCAGGTTTCGGAGGGGATCTATGCCGGATCTGGAAGATGTTTCGAGTTTCGAGCACAGA
TGGAACTGGGTGAAGTGAAGGCAACATGAAATTGTTATAGGTATTCTATAACTCAGTTTGATTAAGGTTTAGGTGGGTTTTCTTTCTCATAGTAATGGGTAATCTTTGTT
GGTGGTTTGGTGTTGTGGGGTTTTCTTAGAAGTTACATAGCTTTTAGATTTGGTGTTCTTTCATATTGCATGAACTATTCTAGTATCCAGAATTTGAAGTTGTTTGAAAT
TGTAACTTTGCTTTGTTTTTTTTTTCAGATAGATTTTTGTATAAATACATATAGAATTTGGTTTCATTCTCTGTGCATTGTTGCTTCTATGAATCTATTTTGTTCTATGT
TCTCCCCGGATTTGGTAAACTTGTTCTGAACTTTAGATATTTGCATCATTAAGTTTAAAAGACACCGCTGAGGAAGCC

Protein sequence

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MAAVILPPQDCLGNGLRRRGLVLSPPLKSRRNPKPRSSGNPNFNRDDAICCSGRRRRVPMDGGRSGVRETSTTAAVSPRNLVMGQVKILKRGEALESKGEDLDLVLGSTH
RLGPDPDLMQKQVSEGIYAGSGRCFEFRAQMELGEVKAT

Sed0019454 (gene) of Chayote v1 genome