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Sed0019459 (gene) of Chayote v1 genome

Gene IDSed0019459
OrganismSechium edule (Chayote v1)
DescriptionCytochrome b-c1 complex subunit 6
Genome locationLG04:31006092..31013860
RNA-Seq ExpressionSed0019459
SyntenySed0019459
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3292.65Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLF+K+K
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

KAG7030998.1 hypothetical protein SDJN02_05037 [Cucurbita argyrosperma subsp. argyrosperma]5.7e-3292.65Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLF+K+K
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

XP_008456103.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]2.6e-3295.59Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA KLF+KLK
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]5.7e-3292.65Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLF+K+K
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

XP_022983580.1 cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]5.7e-3292.65Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLF+K+K
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

TrEMBL top hitse value%identityAlignment
A0A0A0L6I2 UCR_hinge domain-containing protein2.1e-3292.86Show/hide
Query:  YGADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        Y ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA KL +KLK
Subjt:  YGADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

A0A1S3C350 Cytochrome b-c1 complex subunit 61.2e-3295.59Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA KLF+KLK
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like2.8e-3292.65Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLF+K+K
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 62.8e-3292.65Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVA KLF+K+K
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

A0A6J1J7A4 Cytochrome b-c1 complex subunit 63.6e-3294.12Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        ADEEPVDQKRYLEE CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVA KLF+KLK
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 68.3e-2673.53Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        +DEE VD K  LE  CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.7e-3288.24Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        AD+E VD K+YLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVA KLF+KLK
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

Q1ZXP3 Probable cytochrome b-c1 complex subunit 63.0e-0743.1Show/hide
Query:  LEEGCKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAQKLFSKLK
        ++EGC   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV  KLF++LK
Subjt:  LEEGCKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAQKLFSKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial1.3e-2683.05Show/hide
Query:  DEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.9e-3388.24Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK
        AD+E VD K+YLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKCVA KLF+KLK
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein4.8e-2989.66Show/hide
Query:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        AD+E VD K+YLEE CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  ADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein9.1e-2883.05Show/hide
Query:  DEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein9.1e-2883.05Show/hide
Query:  DEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATATGGGGCAGATGAAGAACCCGTTGATCAGAAGAGATATCTTGAAGAAGGTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAG
AATCCAAGGGGATGACAGTGGTCATAAGCATTGCACCGGACAATATTTCGATTATTGGTCTTGCATCGACAAATGTGTTGCACAAAAACTATTTTCCAAACTAAAGTAA
mRNA sequenceShow/hide mRNA sequence
GAAGCCCGAGTTAGGTTCCGAGTACTGAGTAGACCAAACTGAGCTGATTTCCCTAATTCACTTTTCTCATTTCCCCTATTTCTCACGGCCGCTCACTTTCATCTTCTTCT
TCTTCATTCTCGTCTTTGTTCTTATTTTACGAACAATTCTCCAGCGTTGACGCAATGTAAGAAAACGATTCTTTGTCCTTTTCTAAATCTCGATTCATCAACGAATCGTT
CTATTCCACTCTTGAATCGGAAGATTTACGATTCAAACATACGTTTTGAATCGTTTTCATCCGATTTAAATATTTCTCTGAATCTCGTTTTTGTTTTTTTAACAAGCACG
ATGAAAAATATCATCTCCTTGCTGAATTGAAACTATGAAATATGGGGCAGATGAAGAACCCGTTGATCAGAAGAGATATCTTGAAGAAGGTTGCAAGCCCAAGTGTGTGA
AACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGATGACAGTGGTCATAAGCATTGCACCGGACAATATTTCGATTATTGGTCTTGCATCGACAAATGT
GTTGCACAAAAACTATTTTCCAAACTAAAGTAAAGGCATGTGAGGGTCCCTATCCTTTTGATTGCAACATTTTCTGATATTTTTATGCAATGTGGTGTTTTGGTGACTTG
ATTTTTGCATCTACAAAAAATGCCAAGGGCTGTGCAATTTTATAAAACTATGAAGACTTATTCATAGTCAATAAGAAAGGATTTTGGATTCACGTTCAGAGTCTATGGCA
ACTTTTCTTCTTAATGTTATGATTGCTTAATGTAAACATTATTGATCCAACCCAGTTGTTTTAAAAAAGAAATGTTTAGCAACATGATCCAATATTGAATTTTCTGTTAC
TCGGTTTATCGAATGGCTGTGGCGCACTGTTCGAAAAAAAGTAGCTATCAAGGTTCAATTAGGAAGATCAAGATGGTCATATACCAAATTTCTTTGTTAGCTACACATGC
TGTGTTGGTAGAAGATGATGTTTCATTTAGTGATACCAAGTTGTAATCTCTCTCGAGTATAATAATGATCTTTGCTAGAACAATGGATAGTATGGAGGGTAGAGGGAGTT
TCAATCATGAGGATGGAGGATTGAACCAACTCTTTGGACAATAATAGATATCTTAGTCATATAACTATGATTAGCAAGTTAAGTAGATGAATATTGTGTATTGGAAAAGA
GTAGGGACATTGAAAGATCATGGGGAAAGGATGAAGGGGAGC
Protein sequenceShow/hide protein sequence
MKYGADEEPVDQKRYLEEGCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAQKLFSKLK