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Sed0019478 (gene) of Chayote v1 genome

Gene IDSed0019478
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:20913695..20914003
RNA-Seq ExpressionSed0019478
SyntenySed0019478
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024157.1 hypothetical protein SDJN02_12970, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2589.71Show/hide
Query:  MKLFHRIRKMLVRFVFSFPSRVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQE
        MKLFHRIRK+LVRFVFS PSRVSSR+RT+YDK +DPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQ+
Subjt:  MKLFHRIRKMLVRFVFSFPSRVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQE

KDP36932.1 hypothetical protein JCGZ_08223 [Jatropha curcas]1.3e-2162.37Show/hide
Query:  ISSNSFNFSSMKLFHRIRKMLVRFVFSFPS---RVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV
        +SS+ F+FS+MK+F+R RK+L+R +FSFPS     SS K+ +  + FDPPKTSCSSYYSSHSHY EAIADCIEF NKSSQEGV +  +S+ +V
Subjt:  ISSNSFNFSSMKLFHRIRKMLVRFVFSFPS---RVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV

KGN60030.1 hypothetical protein Csa_001336 [Cucumis sativus]2.4e-3179.41Show/hide
Query:  MQRPKTIGVTIII------SSNSFNFSSMKLFHRIRKMLVRFVFSFPSRV--SSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGV
        MQRPKT    I        SSNS NFSSMKLF RIRKMLVRFVFS PSRV  SSR+RTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQ+  
Subjt:  MQRPKTIGVTIII------SSNSFNFSSMKLFHRIRKMLVRFVFSFPSRV--SSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGV

Query:  FE
        FE
Subjt:  FE

XP_021284958.1 uncharacterized protein LOC110417084 [Herrania umbratica]2.4e-2062.77Show/hide
Query:  SNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSS------RKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV
        S   NFS+MKLF+R RK+L+R +FS PS  SS       K+T+ D+ FDPPKTSCSSYYSSHSHY EAIADCIEFFNKSSQEG+ +  +S+ +V
Subjt:  SNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSS------RKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV

XP_024925739.1 uncharacterized protein LOC107408298 [Ziziphus jujuba]2.4e-2051.35Show/hide
Query:  PKTIGVTIIISSNSFNFSSMKLFHRIRKMLVRFVFSFPSRVS------------SRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEG
        P T G +   ++   N S+MKLF+R RK+L+R +FS P R S            + ++ + D+SFDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQEG
Subjt:  PKTIGVTIIISSNSFNFSSMKLFHRIRKMLVRFVFSFPSRVS------------SRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEG

Query:  VFEASRSNSMV
          +  +S+ ++
Subjt:  VFEASRSNSMV

TrEMBL top hitse value%identityAlignment
A0A061FD82 Uncharacterized protein1.5e-2062.77Show/hide
Query:  SNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSS------RKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV
        S   NFS+MKLF+R RK+L+R +FS PS  SS       K+T+ D+ FDPPKTSCSSYYSSHSHY EAIADCIEFFNKSSQEG+ +  +S+ +V
Subjt:  SNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSS------RKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV

A0A067KLC1 Uncharacterized protein6.3e-2262.37Show/hide
Query:  ISSNSFNFSSMKLFHRIRKMLVRFVFSFPS---RVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV
        +SS+ F+FS+MK+F+R RK+L+R +FSFPS     SS K+ +  + FDPPKTSCSSYYSSHSHY EAIADCIEF NKSSQEGV +  +S+ +V
Subjt:  ISSNSFNFSSMKLFHRIRKMLVRFVFSFPS---RVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV

A0A0A0LDK4 Uncharacterized protein1.1e-3179.41Show/hide
Query:  MQRPKTIGVTIII------SSNSFNFSSMKLFHRIRKMLVRFVFSFPSRV--SSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGV
        MQRPKT    I        SSNS NFSSMKLF RIRKMLVRFVFS PSRV  SSR+RTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQ+  
Subjt:  MQRPKTIGVTIII------SSNSFNFSSMKLFHRIRKMLVRFVFSFPSRV--SSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGV

Query:  FE
        FE
Subjt:  FE

A0A6J1ADC8 uncharacterized protein LOC1104170841.2e-2062.77Show/hide
Query:  SNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSS------RKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV
        S   NFS+MKLF+R RK+L+R +FS PS  SS       K+T+ D+ FDPPKTSCSSYYSSHSHY EAIADCIEFFNKSSQEG+ +  +S+ +V
Subjt:  SNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSS------RKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV

A0A6P6FUZ0 uncharacterized protein LOC1074082981.2e-2051.35Show/hide
Query:  PKTIGVTIIISSNSFNFSSMKLFHRIRKMLVRFVFSFPSRVS------------SRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEG
        P T G +   ++   N S+MKLF+R RK+L+R +FS P R S            + ++ + D+SFDPPKTSCSSYYSSHSHY+EAIADCIEFFNKSSQEG
Subjt:  PKTIGVTIIISSNSFNFSSMKLFHRIRKMLVRFVFSFPSRVS------------SRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEG

Query:  VFEASRSNSMV
          +  +S+ ++
Subjt:  VFEASRSNSMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75717.1 unknown protein6.9e-1357.53Show/hide
Query:  MKLFHRIRKMLVRFVFSFPSRVSSRK------RTSYDKSFDPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS
        MKLFH++ K+L+R +  F    SSR+      R+   + F+PPK SC SSYYSSH HY EAIADCIEFFNKSS
Subjt:  MKLFHRIRKMLVRFVFSFPSRVSSRK------RTSYDKSFDPPKTSC-SSYYSSHSHYDEAIADCIEFFNKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGCCTAAAACCATTGGAGTTACTATAATAATTTCGTCCAATTCTTTTAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATGCTCGTCCGATTCGT
GTTCTCATTCCCCTCTCGAGTGTCGTCGAGAAAACGAACGAGCTATGACAAGTCGTTCGATCCACCGAAAACGTCGTGCAGCTCATATTACTCCTCTCATTCTCACTACG
ATGAGGCAATTGCCGACTGTATCGAGTTCTTTAACAAGTCATCGCAAGAGGGCGTTTTTGAAGCTTCGAGATCTAACTCGATGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGGCCTAAAACCATTGGAGTTACTATAATAATTTCGTCCAATTCTTTTAACTTCTCTTCCATGAAGCTCTTTCATCGAATCCGTAAGATGCTCGTCCGATTCGT
GTTCTCATTCCCCTCTCGAGTGTCGTCGAGAAAACGAACGAGCTATGACAAGTCGTTCGATCCACCGAAAACGTCGTGCAGCTCATATTACTCCTCTCATTCTCACTACG
ATGAGGCAATTGCCGACTGTATCGAGTTCTTTAACAAGTCATCGCAAGAGGGCGTTTTTGAAGCTTCGAGATCTAACTCGATGGTATGA
Protein sequenceShow/hide protein sequence
MQRPKTIGVTIIISSNSFNFSSMKLFHRIRKMLVRFVFSFPSRVSSRKRTSYDKSFDPPKTSCSSYYSSHSHYDEAIADCIEFFNKSSQEGVFEASRSNSMV