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Sed0019479 (gene) of Chayote v1 genome

Gene IDSed0019479
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG02:52582936..52583755
RNA-Seq ExpressionSed0019479
SyntenySed0019479
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]1.6e-4871.88Show/hide
Query:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF
        M T+E FN  DLNP+AKEWNP+YDCAPEE+RCLFLTFS G PL+E QIV+FFTRK+G CIERVYVHY +G  Q PLFGKVVFVAS++PAI++ GK+EAKF
Subjt:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF

Query:  SIESKTLWCKRYEARKARFSVSTLGSRR
        SI+SKT+WCK++EARKAR   S   SRR
Subjt:  SIESKTLWCKRYEARKARFSVSTLGSRR

KAE8650218.1 hypothetical protein Csa_011746 [Cucumis sativus]7.8e-4870.31Show/hide
Query:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF
        M T+E FN  DLNP+AKEWNP+YDCAPEE+RCLFLTFS G PL+E QIV+FFTRK+G CIERVYVHY +G  Q PLFGKVVFVAS++PAI++ GK+EAKF
Subjt:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF

Query:  SIESKTLWCKRYEARKARFSVSTLGSRR
        SI++KT+WCK++E+RKAR   S   SRR
Subjt:  SIESKTLWCKRYEARKARFSVSTLGSRR

KAG7028512.1 hypothetical protein SDJN02_09693, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4674.22Show/hide
Query:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTR--------KYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAII
        MD+L+GFN  D LNP AKEWNP++DCAPEE+RCLFLTFS G+PLSE QIV+FFTR         YG CIERVYVHY DG  Q PLFGKVVFVAS++PAII
Subjt:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTR--------KYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAII

Query:  MEGKQEAKFSIESKTLWCKRYEARKARF
        + GK EAKFSIESKTLWCKRYEARK RF
Subjt:  MEGKQEAKFSIESKTLWCKRYEARKARF

XP_022944781.1 uncharacterized protein LOC111449194 [Cucurbita moschata]3.1e-4978.69Show/hide
Query:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAK
        MD+L+GFN  D LNP AKEWNP++DCAPEE+RCLFLTFS G+PLSE QIV+FFTR YG CIERVYVHY DG  Q PLFGKVVFVAS++PAII+ GK EAK
Subjt:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAK

Query:  FSIESKTLWCKRYEARKARFSV
        FSIESKTLWCKRYEARK RF V
Subjt:  FSIESKTLWCKRYEARKARFSV

XP_023540960.1 uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]8.3e-5079.51Show/hide
Query:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAK
        MD+L+GFN  D LNP AKEWNP++DCAPEE+RCLFLTFS G+PLSE QIV+FFTRKYG CIERVYVHY DG  Q PLFGKVVFVAS++PAII+ GK EAK
Subjt:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAK

Query:  FSIESKTLWCKRYEARKARFSV
        FSIESKTLWCKRYEARK RF V
Subjt:  FSIESKTLWCKRYEARKARFSV

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein1.2e-4165.62Show/hide
Query:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF
        M T+E FN  DLNP+AKEWNP+YDCAPEE+RCLFLTFS G PL+E QIV+FFT        RVYVHY +G  Q PLFGKVVFVAS++PAI++ GK+EAKF
Subjt:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF

Query:  SIESKTLWCKRYEARKARFSVSTLGSRR
        SI++KT+WCK++E+RKAR   S   SRR
Subjt:  SIESKTLWCKRYEARKARFSVSTLGSRR

A0A5A7U0U8 Uncharacterized protein7.6e-4971.88Show/hide
Query:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF
        M T+E FN  DLNP+AKEWNP+YDCAPEE+RCLFLTFS G PL+E QIV+FFTRK+G CIERVYVHY +G  Q PLFGKVVFVAS++PAI++ GK+EAKF
Subjt:  MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKF

Query:  SIESKTLWCKRYEARKARFSVSTLGSRR
        SI+SKT+WCK++EARKAR   S   SRR
Subjt:  SIESKTLWCKRYEARKARFSVSTLGSRR

A0A6J1E9T6 uncharacterized protein LOC1114320883.5e-4677.98Show/hide
Query:  DLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCK
        DLNP+AKEW+P++D APEE+RCLFLTFS G+PL+E QIV FFTRK+G CIERVYVHYR+G  +PPLFGKVVFVAS++PAII+EGK EAKFSIES+T+WCK
Subjt:  DLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCK

Query:  RYEARKARF
        RYEARKAR+
Subjt:  RYEARKARF

A0A6J1FZ16 uncharacterized protein LOC1114491941.5e-4978.69Show/hide
Query:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAK
        MD+L+GFN  D LNP AKEWNP++DCAPEE+RCLFLTFS G+PLSE QIV+FFTR YG CIERVYVHY DG  Q PLFGKVVFVAS++PAII+ GK EAK
Subjt:  MDTLEGFNVRD-LNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAK

Query:  FSIESKTLWCKRYEARKARFSV
        FSIESKTLWCKRYEARK RF V
Subjt:  FSIESKTLWCKRYEARKARFSV

A0A6J1IWW8 uncharacterized protein LOC1114792143.9e-4576.15Show/hide
Query:  DLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCK
        DLNP+AKEW+P++D APEE+RCLFLTFS G+PL+E QIV FFTR++G CIERVYVHYR+G  +PPLFGKVVFVAS++PAII+EGK EAKF IES+T+WCK
Subjt:  DLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCK

Query:  RYEARKARF
        RYEARKAR+
Subjt:  RYEARKARF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49290.1 unknown protein8.1e-1135.05Show/hide
Query:  ENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVV--FVASTLPAIIMEGKQEAKFSIESKTLWCKRYEARKARFSVST
        ++R +FLTFSKG+P+SE ++  +FTR++G  IE V +   +  N+ PLF K+V     +++   I+  +   KF+I+ K +W ++Y  RK  +  S+
Subjt:  ENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVV--FVASTLPAIIMEGKQEAKFSIESKTLWCKRYEARKARFSVST

AT1G64870.1 unknown protein3.6e-1130.91Show/hide
Query:  WNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYG-PCIERVYVHYR-----------DGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKT
        WN  +  A ++ R +FLTFS+G P+S  +++  FT  YG  C+E VY+              +G  Q PLF K+V  +      I+ G+++ K+ I  K 
Subjt:  WNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYG-PCIERVYVHYR-----------DGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKT

Query:  LWCKRYEARK
        +W ++++  K
Subjt:  LWCKRYEARK

AT3G45200.1 unknown protein2.8e-1130.91Show/hide
Query:  WNPVYDC-APEENRCLFLTFSKGHPLSERQIVSFFTRKYGP-CIERVYVHYRDGEN----------QPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKT
        WN   +C A E +R LFLTFS+G+P++  +I+  FT++YG  C+E VY+ + +  +          Q  LF ++V  + T    +++ +Q+ +  I  K 
Subjt:  WNPVYDC-APEENRCLFLTFSKGHPLSERQIVSFFTRKYGP-CIERVYVHYRDGEN----------QPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKT

Query:  LWCKRYEARK
        +W ++Y+ R+
Subjt:  LWCKRYEARK

AT5G11220.1 unknown protein8.9e-1030.61Show/hide
Query:  APEENRCLFLTFSKGHPLSERQIVSFFTRKYGP-CIERVYV----------HYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCKRY
        A +  R +F+TFS+G P+S+ ++  FFT+ YG  C+E VY+          +  D   Q  LF K+V  +      I++G++  +F    K +W ++Y
Subjt:  APEENRCLFLTFSKGHPLSERQIVSFFTRKYGP-CIERVYV----------HYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCKRY

AT5G13620.1 unknown protein1.3e-1334.78Show/hide
Query:  APEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCKRYEARKA
        A E++R +FLTFS+G+PLSE ++ ++FTR++G  IE + +   +G  Q      V+  A+ +P I+ +G +  K++I  K +W ++Y  R +
Subjt:  APEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCKRYEARKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACACTTGAGGGCTTTAATGTCAGAGATTTGAACCCTGACGCAAAAGAGTGGAACCCCGTTTACGATTGCGCTCCCGAGGAAAATCGATGCCTCTTTCTCACTTT
CTCGAAAGGCCATCCGCTCTCCGAGCGCCAAATCGTCAGCTTCTTCACCCGAAAATACGGGCCATGCATCGAAAGGGTGTACGTGCATTATCGGGACGGAGAGAACCAAC
CTCCATTGTTTGGGAAGGTGGTATTTGTTGCATCTACATTACCAGCAATCATCATGGAAGGAAAACAAGAAGCCAAGTTTTCTATTGAGAGTAAAACACTATGGTGCAAG
AGATATGAGGCTCGAAAAGCTCGGTTTAGTGTTTCGACTTTAGGGTCTCGACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACACTTGAGGGCTTTAATGTCAGAGATTTGAACCCTGACGCAAAAGAGTGGAACCCCGTTTACGATTGCGCTCCCGAGGAAAATCGATGCCTCTTTCTCACTTT
CTCGAAAGGCCATCCGCTCTCCGAGCGCCAAATCGTCAGCTTCTTCACCCGAAAATACGGGCCATGCATCGAAAGGGTGTACGTGCATTATCGGGACGGAGAGAACCAAC
CTCCATTGTTTGGGAAGGTGGTATTTGTTGCATCTACATTACCAGCAATCATCATGGAAGGAAAACAAGAAGCCAAGTTTTCTATTGAGAGTAAAACACTATGGTGCAAG
AGATATGAGGCTCGAAAAGCTCGGTTTAGTGTTTCGACTTTAGGGTCTCGACGATGA
Protein sequenceShow/hide protein sequence
MDTLEGFNVRDLNPDAKEWNPVYDCAPEENRCLFLTFSKGHPLSERQIVSFFTRKYGPCIERVYVHYRDGENQPPLFGKVVFVASTLPAIIMEGKQEAKFSIESKTLWCK
RYEARKARFSVSTLGSRR