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Sed0019517 (gene) of Chayote v1 genome

Gene IDSed0019517
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:32432899..32434036
RNA-Seq ExpressionSed0019517
SyntenySed0019517
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593981.1 hypothetical protein SDJN03_13457, partial [Cucurbita argyrosperma subsp. sororia]5.2e-7480.11Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR
        M SKSPVFPFP+PQH+SDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDS K K KKRWW NALL FK  W+   NDAVF    DVH+
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR

Query:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        +RARAFRAS+SGPVY+TESR+GS+TP RST RP+SGPLAGTLTP  K DIQ PYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

KAG7026322.1 hypothetical protein SDJN02_12823, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-7379.56Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR
        M SKSPVFPFP+PQH+SDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDS K K KKRWW NALL FK  W+   NDAVF    DVH+
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR

Query:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        +RARAFRAS+SGPVY+TESR+ S+TP RST RP+SGPLAGTLTP  K DIQ PYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_022930362.1 uncharacterized protein LOC111436831 [Cucurbita moschata]6.1e-7581.22Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR
        M SKSPVFPFP+PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDS K K KKRWW NALL FK  W+H  NDAVF    DVH+
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR

Query:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        +RARAFRAS+SGPVY+TESR+GS+TP RST RP+SGPLAGTLTP  K DIQ PYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_023000154.1 uncharacterized protein LOC111494438 [Cucurbita maxima]4.7e-7581.77Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR
        M SKSPVFPFP+PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDS K K KKRWW NALL FK  WIH  NDAVF    DVH+
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR

Query:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        +RARAFRAS+SGPVY+TESR+GS+TP RST RP+SGPLAGTLTP  K DIQ PYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

XP_038875477.1 uncharacterized protein LOC120067919 [Benincasa hispida]5.9e-7078.26Show/hide
Query:  MGSKSPVFPFP-QPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKK--PKIKKRWWNNALLLFKRTWI-HRPNDAVFADPD
        M +KSPVFPFP +PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDSK    K KKRWW NA L FK  WI H  NDA F   D
Subjt:  MGSKSPVFPFP-QPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKK--PKIKKRWWNNALLLFKRTWI-HRPNDAVFADPD

Query:  VHRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        VH++RARAFRAS+SGPVYITESR+GS+TP RST RPSSGPLAGTLTP  K D+Q PYLSLRELNMEQQQYR STSA MPIYLVT
Subjt:  VHRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

TrEMBL top hitse value%identityAlignment
A0A0A0KCH6 Uncharacterized protein4.2e-6975.94Show/hide
Query:  MGSKSPVFPFP-QPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKK--PKIKKRWWNNALLLFKRTW--IHRPNDAV--FA
        M +KSPVFPFP +PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DS+HFKLQKPISKDDSK    K KKRWW NA L FK  W  IH  NDA     
Subjt:  MGSKSPVFPFP-QPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKK--PKIKKRWWNNALLLFKRTW--IHRPNDAV--FA

Query:  DPDVHRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        D DVH++RARAFRAS+SGPVY+TESR+GSSTPCRST RPSSGPLAGTLTP  K D++ PYLSLRELNMEQQQYR S+SA MPIYLVT
Subjt:  DPDVHRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A1S3C7T3 uncharacterized protein LOC1034978356.4e-7077.42Show/hide
Query:  MGSKSPVFPFP-QPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKK--PKIKKRWWNNALLLFKRTW--IHRPNDAV-FAD
        M +KSPVFPFP +PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDSK    K KKRWW NALL FK  W  IH  NDA  F  
Subjt:  MGSKSPVFPFP-QPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKK--PKIKKRWWNNALLLFKRTW--IHRPNDAV-FAD

Query:  PDVHRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
         DVH++RARAFRAS+SGPVY+TESR+GSSTPCRST RPSSGPLAGTLTP  K D++ PYLSLRELNMEQQQYR S+SA MPIYLVT
Subjt:  PDVHRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A6J1EQ93 uncharacterized protein LOC1114368313.0e-7581.22Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR
        M SKSPVFPFP+PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDS K K KKRWW NALL FK  W+H  NDAVF    DVH+
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR

Query:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        +RARAFRAS+SGPVY+TESR+GS+TP RST RP+SGPLAGTLTP  K DIQ PYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

A0A6J1KJ37 uncharacterized protein LOC1114944382.3e-7581.77Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR
        M SKSPVFPFP+PQHFSDYGFDPQ DYFQVLEEARKH+RE SR S+DSIHFKLQKPISKDDS K K KKRWW NALL FK  WIH  NDAVF    DVH+
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFA-DPDVHR

Query:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        +RARAFRAS+SGPVY+TESR+GS+TP RST RP+SGPLAGTLTP  K DIQ PYLSLRELNMEQQQYRNSTSAAMPIYLVT
Subjt:  SRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

V4U0I4 Uncharacterized protein1.1e-6471.04Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKI--KKRWWNNALLLFKRTWIHRPND-AVFADPDV
        M +KSP+FP P+PQHFSDYGFDPQ +Y+QVLEEARKHK+E S  S+D +HFKLQKPISK++SK  K   KKRWW NALL FK  WIH  +   +  D DV
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKI--KKRWWNNALLLFKRTWIHRPND-AVFADPDV

Query:  HRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        H +RARAFRAS+SGPVYITESR+GSSTP R+T RPSSGPLAGTLTP+ K D+Q PYLSLRELNMEQQQ R STS ++PIYLVT
Subjt:  HRSRARAFRASLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G06840.1 unknown protein1.4e-4053.61Show/hide
Query:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRE-CSRSSLDSIHFKLQKPISKDDSKK------PKIKKRWWNNALLLFKRTWIHRPNDAVFA
        M + SP+F     QHFSDYGFDPQ  YFQV+EEARKHKRE  S+S  + + FK+QKPISKD+  +       K K+ WW  AL  FK  W   P   V  
Subjt:  MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRE-CSRSSLDSIHFKLQKPISKDDSKK------PKIKKRWWNNALLLFKRTWIHRPNDAVFA

Query:  DPDVHRSRARAFRA-----SLSGPVYITESR-TGSSTPCR-STPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT
        + D    R R FR+     S+SGP+Y TES  +GS+TP R +T +PSSGP+AGTLTP  K D+  PYLSLRELNMEQ Q R S S++ PIYLVT
Subjt:  DPDVHRSRARAFRA-----SLSGPVYITESR-TGSSTPCR-STPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT

AT5G49170.1 unknown protein5.1e-3552.48Show/hide
Query:  SKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDD------SKKPKIKKRW-W-NNALLLFK-RTWI---------
        S SP+FP  Q QHFSDYGFDPQ  YFQVLEEA+KHK     SS+D+  FKLQKPISKDD        K K KKRW W  NAL  FK R W          
Subjt:  SKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDD------SKKPKIKKRW-W-NNALLLFK-RTWI---------

Query:  --HRPNDAVFAD-PDVHRSRARAFRA-SLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAM--PIYL
              D  F D  DVH +RAR FRA S+SGPVY+TES +GSSTP R     S+                  YLSLRELNME+QQ R +TS++M  PIYL
Subjt:  --HRPNDAVFAD-PDVHRSRARAFRA-SLSGPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAM--PIYL

Query:  VT
        VT
Subjt:  VT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCAAATCCCCTGTTTTCCCCTTCCCTCAGCCTCAACACTTCAGCGACTACGGATTCGACCCTCAATTCGACTATTTTCAGGTTTTGGAAGAAGCAAGAAAGCA
CAAACGAGAGTGTTCAAGATCCTCCCTGGACTCCATTCATTTCAAGCTCCAAAAACCCATTTCCAAAGACGATTCTAAAAAACCCAAAATCAAAAAACGGTGGTGGAATA
ACGCTCTCCTCCTCTTCAAACGCACCTGGATCCACCGCCCCAACGACGCCGTTTTCGCCGACCCCGACGTTCACCGCTCCCGAGCCCGAGCCTTCCGCGCCTCCCTCTCC
GGCCCGGTTTACATCACCGAATCCCGAACCGGCTCCTCCACCCCCTGCCGGTCCACCCCCCGGCCCTCCTCCGGTCCCCTCGCCGGAACTCTCACGCCGATCACAAAACC
CGACATCCAATTTCCTTACCTCAGCCTCCGAGAACTGAACATGGAGCAACAGCAATACAGAAACTCCACGTCAGCAGCCATGCCCATTTACTTGGTTACTTGA
mRNA sequenceShow/hide mRNA sequence
CTAACTTTTGGGTTCTTTAAATTCCCATTGAATCCTTCCCCACATGTGATCTCTTGGGGTTCTCTTAACTTCAAAAAATGGGTTCCAAATCCCCTGTTTTCCCCTTCCCT
CAGCCTCAACACTTCAGCGACTACGGATTCGACCCTCAATTCGACTATTTTCAGGTTTTGGAAGAAGCAAGAAAGCACAAACGAGAGTGTTCAAGATCCTCCCTGGACTC
CATTCATTTCAAGCTCCAAAAACCCATTTCCAAAGACGATTCTAAAAAACCCAAAATCAAAAAACGGTGGTGGAATAACGCTCTCCTCCTCTTCAAACGCACCTGGATCC
ACCGCCCCAACGACGCCGTTTTCGCCGACCCCGACGTTCACCGCTCCCGAGCCCGAGCCTTCCGCGCCTCCCTCTCCGGCCCGGTTTACATCACCGAATCCCGAACCGGC
TCCTCCACCCCCTGCCGGTCCACCCCCCGGCCCTCCTCCGGTCCCCTCGCCGGAACTCTCACGCCGATCACAAAACCCGACATCCAATTTCCTTACCTCAGCCTCCGAGA
ACTGAACATGGAGCAACAGCAATACAGAAACTCCACGTCAGCAGCCATGCCCATTTACTTGGTTACTTGAAATTACTTAATCAACCCTAAACCCTTCTTTGGGGTTTCTG
GATTTCGATTCAACTTTTTTTTTATGGGTTGACCGGTGTGGCCGGTGATCGGCTTGCTTTTCTTTTTCTTTTTTTTTTTTAATTTCTTGAAAACTGCATACCTGTGTCTG
ATCCATCGGGAAAAGATGAAAGGATGGGATCTTTCTTTGAACCGCCCTTTATTTATTTCCGCGTTGACCTGCTACCGCCTTTGCCTGTATTTATTATTTTTGCATTTTAG
AGCCTATATCTGATTTCTCCTCATGTTTCTTAAACGGATGAGATTTCATTTGTATTAATTAAGCTCATGTTTGATTTTTGGGGGTAGACCCGTTTGTTGGGATGTAATGT
TTTTTAGTGATTTTTATAAAAAATTTCATGTTATATAATTTTTATTTTTTGAAAA
Protein sequenceShow/hide protein sequence
MGSKSPVFPFPQPQHFSDYGFDPQFDYFQVLEEARKHKRECSRSSLDSIHFKLQKPISKDDSKKPKIKKRWWNNALLLFKRTWIHRPNDAVFADPDVHRSRARAFRASLS
GPVYITESRTGSSTPCRSTPRPSSGPLAGTLTPITKPDIQFPYLSLRELNMEQQQYRNSTSAAMPIYLVT