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Sed0019520 (gene) of Chayote v1 genome

Gene IDSed0019520
OrganismSechium edule (Chayote v1)
DescriptionUdp-arabinopyranose mutase
Genome locationLG07:19485227..19486420
RNA-Seq ExpressionSed0019520
SyntenySed0019520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577325.1 hypothetical protein SDJN03_24899, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1259.41Show/hide
Query:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSF-GFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK
        MTTPPSLLSL    +        +L R    SF    + L+L   FL +     L+A KLNERVLKLFVATGKDEV SLIEAFNIQ IVTPVLPT CSEK
Subjt:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSF-GFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK

Query:  F
        F
Subjt:  F

KAG6700539.1 hypothetical protein I3842_08G117200 [Carya illinoinensis]1.6e-1180.85Show/hide
Query:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF
        LQA KL E+VLKLF+ATG D+VFSLIEA NIQHI+TPVLPT CSEKF
Subjt:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF

XP_022136568.1 uncharacterized protein LOC111008243 [Momordica charantia]2.7e-1156.44Show/hide
Query:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRL-CFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK
        MT PPSLLSL             ++L   S S   FL  ++ L  FL +     L+A KLNERVL+LFVATG DEV SLIEAFNIQ IVTPVLPT CSEK
Subjt:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRL-CFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK

Query:  F
        F
Subjt:  F

XP_023552893.1 uncharacterized protein LOC111810418, partial [Cucurbita pepo subsp. pepo]6.3e-1389.36Show/hide
Query:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF
        L+A KLNERVLKLFVATGKDEV SLIEAFNIQ IVTPVLPT CSEKF
Subjt:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF

XP_038904960.1 uncharacterized protein LOC120091153 isoform X2 [Benincasa hispida]4.5e-1155.45Show/hide
Query:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSF-GFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK
        MTTPPSLLSL    +        +L R    SF    + L+L   FL +     L+A KLNER+LKLFVA+GKDEV  LIEAFNIQ +VTPVLPT CSEK
Subjt:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSF-GFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A1S2XQ78 uncharacterized protein LOC1015017776.4e-1150.93Show/hide
Query:  MTTPPSLLSL--------LCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVL
        M TPPSLLSL        L   S   P P   LL  F           LR+          L+A KL E+VLKLF+ATGKDEV SL++A NIQHIVTPVL
Subjt:  MTTPPSLLSL--------LCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVL

Query:  PTSCSEKF
        PT CSEKF
Subjt:  PTSCSEKF

A0A1S3X5W3 uncharacterized protein LOC107761584 isoform X28.3e-1151.52Show/hide
Query:  TTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF
        T PPSLLSL             +LL   SFS   FL  ++    L   F   L+A KLNE++LKLF+ATGK+E+ SLI+AFNIQ ++TPVLPT CSEKF
Subjt:  TTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF

A0A445DCS5 Uncharacterized protein6.4e-1170.59Show/hide
Query:  FWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF
        F   L+A KL E+VL+LF+ATGKDEV SL++A NIQHI+TPVLPT CSEKF
Subjt:  FWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF

A0A5J5T0X3 Uncharacterized protein1.1e-1078.72Show/hide
Query:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF
        L+A KL ERVLKLF+ATGKDEVFSLI+A NIQ  VTPVLPT CS+KF
Subjt:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF

A0A6J1C7X9 uncharacterized protein LOC1110082431.3e-1156.44Show/hide
Query:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRL-CFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK
        MT PPSLLSL             ++L   S S   FL  ++ L  FL +     L+A KLNERVL+LFVATG DEV SLIEAFNIQ IVTPVLPT CSEK
Subjt:  MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRL-CFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEK

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30390.1 unknown protein4.1e-1059.57Show/hide
Query:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF
        L+A KLNERVL+LF+A+G +EV S+I+A  I+  V+P+LPT C EKF
Subjt:  LQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACCCCTCCATCTCTCTTGTCTCTCCTTTGTCCCCGATCACATCCTCCTCCTCCTCCTCCTCCATCTCTTCTCCGGTACTTCTCTTTCTCTTTTGGGTTT
TTTCTATTTCTCAATCTTCGCTTGTGTTTCCTCTCCTCTCCATTTTGGATCTTTCTTCAGGCTCGAAAATTAAACGAGAGGGTTTTAAAGTTGTTTGTGGCAACT
GGAAAAGATGAAGTTTTTTCACTCATTGAGGCATTCAATATCCAGCATATTGTCACCCCTGTTCTTCCTACTAGCTGTTCCGAAAAATTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAACCCCTCCATCTCTCTTGTCTCTCCTTTGTCCCCGATCACATCCTCCTCCTCCTCCTCCTCCATCTCTTCTCCGGTACTTCTCTTTCTCTTTTGGGTTT
TTTCTATTTCTCAATCTTCGCTTGTGTTTCCTCTCCTCTCCATTTTGGATCTTTCTTCAGGCTCGAAAATTAAACGAGAGGGTTTTAAAGTTGTTTGTGGCAACT
GGAAAAGATGAAGTTTTTTCACTCATTGAGGCATTCAATATCCAGCATATTGTCACCCCTGTTCTTCCTACTAGCTGTTCCGAAAAATTCTAG
Protein sequenceShow/hide protein sequence
MTTPPSLLSLLCPRSHPPPPPPPSLLRYFSFSFGFFLFLNLRLCFLSSPFWIFLQARKLNERVLKLFVATGKDEVFSLIEAFNIQHIVTPVLPTSCSEKF